| Literature DB >> 27856929 |
Xia Xu1, Hongchao Wang2, Haijun Li1, Xiaopei Cui1, Hongyu Zhang1.
Abstract
Objective To investigate the association between serpin family E member 1 ( SERPINE1) -844 A/G and -675 4G/5G polymorphisms and chronic obstructive pulmonary disease (COPD) in a Chinese Han population. Method SERPINE1 -844 A/G and -675 4G/5G polymorphisms were assessed by polymerase chain reaction-restriction fragment length polymorphism sequencing of genomic DNA from patients with COPD and healthy smoking controls. Results Out of 140 patients with COPD and 100 controls, all SERPINE1 -844 and -675 polymorphisms were in Hardy-Weinberg equilibrium. Differences in SERPINE1 -675 4G and 5G allele frequencies were statistically significant between the COPD and control groups (odds ratio [OR] 1.45, 95% confidence interval [CI] 1.00, 2.09), but there was no significant between-group difference in SERPINE1 -844 A and G allele frequencies. The SERPINE1 -675 4G/4G genotype was associated with COPD (OR 1.87, 95% CI 1.06, 3.32 [binary logistic regression]). Haplotype analysis showed that COPD was associated with SERPINE1 -844G/4G (OR 2.11, 95% CI 1.32, 3.38) and SERPINE1 -844G/5G (OR 0.66, 95% CI 0.45, 0.95). Conclusion The SERPINE1 -675 polymorphism, but not SERPINE1 -844 polymorphism, was associated with susceptibility to COPD in a Chinese Han population.Entities:
Keywords: Chronic obstructive pulmonary disease; plasminogen activator inhibitor-1; single-nucleotide polymorphism
Mesh:
Substances:
Year: 2016 PMID: 27856929 PMCID: PMC5536740 DOI: 10.1177/0300060516664270
Source DB: PubMed Journal: J Int Med Res ISSN: 0300-0605 Impact factor: 1.671
Characteristics of Chinese Han patients with chronic obstructive pulmonary disease (COPD) and healthy smokers (controls).
| Study group | |||
|---|---|---|---|
| Characteristic | COPD ( | Control ( | Statistical significance |
| Sex, male/female | 101/39 | 70/30 | NS |
| Age, years | 66.0 ± 9.1 | 62.5 ± 11.2 | NS |
| Smoking index, pack-years | 35.2 ± 21.6 | 30.2 ± 19.2 | NS |
| FEV1 % predicted | 51.3 ± 18.6 | 95.3 ± 13.1 | |
| FVC % predicted | 77.4 ± 17.1 | 97.2 ± 12.6 | |
Data presented as n participant incidence or mean ± SD.
FEV1 % predicted, participant FEV1/predicted normal FEV1 value; FVC % predicted, participant FVC/predicted normal FVC value.
NS, no statistically significant between-group difference (P > 0.05; Student’s t-test).
Figure 1.Representative electropherogram showing sequencing analysis of serpin family E member 1 -844 polymorphisms: homozygous A/A, heterozygous A/G and homozygous G/G genotypes.
Figure 2.Representative electropherogram showing sequencing analysis of serpin family E member 1 -675 polymorphisms: homozygous 4G/4G, heterozygous 4G/5G and homozygous 5G/5G genotypes.
Hardy-Weinberg equilibrium of serpin family E member 1 (SERPINE1) -844 and -675 polymorphisms in patients with chronic obstructive pulmonary disease (COPD; n = 140) and healthy smoking controls (n = 100).
| Study group | χ2 | Statistical significance | χ2 | Statistical significance | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| A/A | A/G | G/G | 4G/4G | 4G/5G | 5G/5G | |||||
| COPD | 18 | 69 | 53 | 0.37 | NS | 55 | 65 | 20 | 0.01 | NS |
| Control | 13 | 51 | 36 | 0.59 | NS | 26 | 55 | 19 | 1.11 | NS |
Data presented as n prevalence.
NS, no statistically significant between-group difference (P > 0.05; χ2-test).
Genotype frequencies of serpin family E member 1 (SERPINE1) -844 and -675 polymorphisms in patients with chronic obstructive pulmonary disease (COPD; n = 140) and healthy smoking controls (n = 100).
| Study group | ||||||
|---|---|---|---|---|---|---|
| A/A | A/G | G/G | 4G/4G | 4G/5G | 5G/5G | |
| COPD | 18 (12.9) | 69 (49.3) | 53 (37.9) | 55 (39.3) | 65 (46.4) | 20 (14.3) |
| Control | 13 (13.0) | 51 (51.0) | 36 (36.0) | 26 (26.0) | 55 (55.0) | 19 (19.0) |
| Statistical significance | χ2 = 0.09 | NS | χ2 = 4.71 | NS | ||
Data presented as n (%) prevalence.
NS, no statistically significant between-group difference (P > 0.05; χ2-test).
Allele frequencies of serpin family E member 1 (SERPINE1) -844 and -675 polymorphisms in patients with chronic obstructive pulmonary disease (COPD, n = 140) and healthy smoking controls (n = 100).
| Study group | Statistical significance | ||||||
|---|---|---|---|---|---|---|---|
| Polymorphism | Allele | COPD | Control |
| OR | 95% CI | |
| A | 105 (37.5) | 77 (38.5) | 0.05 | NS | 0.96 | 0.66, 1.39 | |
| G | 175 (62.5) | 123 (61.5) | |||||
| 4G | 175 (62.5) | 107 (53.5) | 3.90 | 1.45 | 1.00, 2.09 | ||
| 5G | 105 (37.5) | 93 (46.5) | |||||
Data presented as n (%) prevalence.
OR, odds ratio; CI, confidence interval.
NS, no statistically significant between-group difference (P > 0.05; χ2-test).
Binary logistic regression analysis showing association between serpin family E member 1 (SERPINE1) polymorphisms and susceptibility to chronic obstructive pulmonary disease (COPD) in patients with COPD (n = 140) and healthy smoking controls (n = 100).
| Genotype | Statistical significance | OR | 95% CI |
|---|---|---|---|
| NS | 1.08 | 0.64, 1.84 | |
| dominant | NS | 0.99 | 0.46, 2.12 |
| codominant[ | NS | 1.02 | 0.46, 2.28 |
| codominantb | NS | 0.94 | 0.41, 2.15 |
| overdominant | NS | 0.93 | 0.56, 1.56 |
| NS | 0.84 | 0.60, 1.19 | |
| dominant | 1.87 | 1.06, 3.32 | |
| codominant[ | NS | 1.12 | 0.54, 2.31 |
| codominantb | NS | 2.01 | 0.92, 4.39 |
| overdominant | NS | 1.41 | 0.84, 2.36 |
OR, odds ratio; CI, confidence interval.
Heterozygous versus wild type homozygous; bminor allele homozygous verse wild type homozygous.
NS, no statistically significant correlation between SERPINE1 polymorphism and susceptibility to COPD (P > 0.05).
Haplotype analysis of serpin family E member 1 -844 and -675 polymorphisms and association with susceptibility to chronic obstructive pulmonary disease (COPD) in patients with COPD (n = 140) and healthy smoking controls (n = 100).
| Study group | |||||
|---|---|---|---|---|---|
| Haplotype | COPD | Control | Statistical significance | OR | 95% CI |
| −844A/4G | 100 (35.7) | 77 (38.5) | NS | 0.91 | 0.62, 1.33 |
| −844G/4G | 75 (26.8) | 30 (15.0) | 2.11 | 1.32, 3.38 | |
| −844G/5G | 100 (35.7) | 93 (46.5) | 0.66 | 0.45, 0.95 | |
Data presented as n (%) prevalence.
OR, odds ratio; CI, confidence interval.
NS, no statistically significant correlation between haplotype and susceptibility to COPD (P > 0.05).