| Literature DB >> 27845654 |
Martin Rajchl, Matthew C H Lee, Ozan Oktay, Konstantinos Kamnitsas, Jonathan Passerat-Palmbach, Wenjia Bai, Mellisa Damodaram, Mary A Rutherford, Joseph V Hajnal, Bernhard Kainz, Daniel Rueckert.
Abstract
In this paper, we propose DeepCut, a method to obtain pixelwise object segmentations given an image dataset labelled weak annotations, in our case bounding boxes. It extends the approach of the well-known GrabCut [1] method to include machine learning by training a neural network classifier from bounding box annotations. We formulate the problem as an energy minimisation problem over a densely-connected conditional random field and iteratively update the training targets to obtain pixelwise object segmentations. Additionally, we propose variants of the DeepCut method and compare those to a naïve approach to CNN training under weak supervision. We test its applicability to solve brain and lung segmentation problems on a challenging fetal magnetic resonance dataset and obtain encouraging results in terms of accuracy.Entities:
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Year: 2016 PMID: 27845654 PMCID: PMC7115996 DOI: 10.1109/TMI.2016.2621185
Source DB: PubMed Journal: IEEE Trans Med Imaging ISSN: 0278-0062 Impact factor: 10.048