| Literature DB >> 27844063 |
Davide Romani1, Isabel Salas Tonello2, Silvia Antonia Brandán2.
Abstract
In this work, the influence of the different S═O, S-O, N⋯H, O⋯H, Na⋯O bonds present in the structures of the powerful laxative drug, sodium picosulphate in gas and aqueous solution phases were studied combining the density functional theory (DFT) calculations with the experimental available infrared, 1H NMR and UV-visible spectra. The structural, topological, electronic and vibrational properties were investigated in both media by using the hybrid B3LYP/6-31G* method and the integral equation formalism variant polarised continuum model (IEFPCM). Here, the characteristics of the S═O, S-O, N⋯H, O⋯H, Na⋯O bonds were completely revealed by using atomic charges, natural bond orbital (NBO) and atoms in molecules (AIM) studies. The infrared, 1H NMR, 13C NMR and UV-visible spectra are in reasonable concordance with those experimental available in the literature. The vibrational analysis of sodium picosulphate was performed considering C3V symmetries for both SO42- groups and the complete assignments of the 126 vibration modes were reported in gas phase and aqueous solution together with their corresponding force fields. In addition, the reactivities of sodium picosulfate increase in solution due to their ionic characteristic which probably justifies their behaviour as a stimulant cathartic and their easy metabolic conversion, as reported in the literature.Entities:
Keywords: Inorganic chemistry; Pharmaceutical science; Theoretical chemistry
Year: 2016 PMID: 27844063 PMCID: PMC5099326 DOI: 10.1016/j.heliyon.2016.e00190
Source DB: PubMed Journal: Heliyon ISSN: 2405-8440
Fig. 1Theoretical molecular structure of anhydrous sodium picosulfate and the atoms labelling.
Fig. 2Detailed structure of anhydrous sodium picosulfate showing the pyridinyl and phenyl rings.
Calculated total (E) and relative energies (ΔE), dipole moments, volume variation and solvation energy for anhydrous sodium picosulphate in gas and aqueous solution phases.
| B3LYP/6-31G* | ||
|---|---|---|
| GAS | ||
| E (hartree) | μ (D) | V (Å3) |
| −2471.27 | 11,06 | 471,2 |
| PCM | ||
| E (hartree) | μ (D) | V (Å3) |
| −2471.36 | 15,14 | 484,5 |
| Solvation energy | ||
| ΔGu# | ΔGne | ΔGc |
| −236.07 | 18,31 | −254,38 |
| ΔV (Å3)=13.3 | ||
Fig. 3Dipole moment directions for the anhydrous sodium picosulfate salt in gas phase (top) and in aqueous solution (bottom) showing the corresponding magnitudes and orientations of their vectors.
Comparison of calculated geometrical parameters for the anhydrous with the corresponding experimental ones.
| B3LYP/6-31G*, | Experimental | |||
|---|---|---|---|---|
| Parameter | Gas | PCM | Exp | Exp |
| Bond lengths (Å) | ||||
| C25-O3 | 1.388 | 1.401 | ||
| C26-O4 | 1.387 | 1.402 | ||
| C12-C13 | 1.534 | 1.530 | ||
| C12-C14 | 1.532 | 1.531 | ||
| C12-C15 | 1.528 | 1.530 | ||
| C13-C16 | 1.402 | 1.402 | 1.372 | |
| C16-C21 | 1.392 | 1.394 | 1.361 | |
| C21-C25 | 1.396 | 1.393 | 1.369 | |
| C25-C23 | 1.394 | 1.392 | 1.361 | |
| C23-C18 | 1.395 | 1.395 | 1.371 | |
| C18-C13 | 1.401 | 1.402 | 1.375 | |
| C14-C17 | 1.400 | 1.403 | 1.372 | |
| C17-C22 | 1.394 | 1.394 | 1.361 | |
| C22-C26 | 1.394 | 1.393 | 1.369 | |
| C26-C24 | 1.396 | 1.392 | 1.361 | |
| C24-C19 | 1.392 | 1.395 | 1.371 | |
| C19-C14 | 1.401 | 1.400 | 1.375 | |
| C15-N11 | 1.342 | 1.344 | 1.347 | |
| N11-C28 | 1.337 | 1.343 | 1.324 | |
| C28-C29 | 1.394 | 1.392 | 1.381 | |
| C29-C27 | 1.393 | 1.394 | 1.369 | |
| C27-C20 | 1.393 | 1.392 | 1.365 | |
| C20-C15 | 1.401 | 1.401 | 1.361 | |
| O5-Na43 | 2.151 | 2.263 | 2.518 | |
| O6-Na44 | 2.156 | 2.263 | 2.518 | |
| S1-O3 | 1.810 | 1.720 | 1.488 | |
| S1-O5 | 1.500 | 1.493 | 1.481 | |
| S1-O7 | 1.461 | 1.472 | 1.463 | |
| S1-O8 | 1.460 | 1.472 | 1.477 | |
| S2-O4 | 1.807 | 1.719 | 1.488 | |
| S2-O6 | 1.500 | 1.493 | 1.481 | |
| S2-O9 | 1.461 | 1.472 | 1.463 | |
| S2-O10 | 1.459 | 1.472 | 1.477 | |
| Dihedral angles (°) | ||||
| C12-C13-C16 | 118.4 | 118.9 | 120.9 | |
| C12-C13-C18 | 123.3 | 122.5 | 121.3 | |
| C12-C14-C17 | 119.5 | 118.3 | 120.9 | |
| C12-C14-C19 | 122.0 | 123.1 | 121.3 | |
| C12-C15-N11 | 118.1 | 118.4 | ||
| C12-C15-C20 | 120.1 | 119.3 | ||
| O7=S1=O8 | 118.7 | 115.6 | 109.6 | |
| O7=S1=O5 | 114.9 | 114.7 | 109.6 | |
| O8=S1=O5 | 115.3 | 115.0 | 109.3 | |
| O3-S1=O8 | 94.9 | 105.7 | 108.9 | |
| O9=S2=O10 | 118.6 | 115.6 | 109.6 | |
| O9=S2=O6 | 114.8 | 114.8 | 109.6 | |
| O6=S2=O10 | 115.3 | 114.9 | 109.3 | |
| O4-S2=O6 | 94.7 | 96.9 | 108.9 | |
| S1-O5-Na43 | 103.8 | 104.4 | 87.4 | |
| S2-O6-Na44 | 103.9 | 104.3 | 87.4 | |
| Dihedral angles (°) | ||||
| C15-C12-C13-C18 | −39.3 | −41.3 | ||
| C15-C12-C14-C19 | 72.2 | 96.0 | ||
| C14-C12-C15-C20 | 119.8 | 139.4 | ||
| C14-C12-C15-N11 | −59.2 | −41.2 | ||
| C25-O3-S1=O5 | 177.2 | 172.6 | ||
| O3-S1=O5-Na43 | 0.0 | −2.6 | −20.0 | |
| C26-O4-S2=O6 | 176.7 | 178.4 | ||
| O4-S2=O6-Na44 | −0.4 | −0.7 | −20.0 | |
This work.
[35].
[36].
Atomic MK and NPA charges, Molecular electrostatic potentials (MEP) and bond orders (Wiberg indexes) for anhydrous sodium picosulfate in both media at B3LYP/6-31G* level of theory.
| Atoms | MK | NPA | MEP | Wiberg index | ||||
|---|---|---|---|---|---|---|---|---|
| Gas | PCM | Gas | PCM | Gas | PCM | Gas | PCM | |
| 1S | 1.137 | 1.141 | 2.537 | 2.564 | −58.941 | −58.949 | 4.210 | 4,217 |
| 2S | 1.137 | 1.140 | 2.539 | 2.564 | −58.948 | −58.958 | 4.210 | 4,217 |
| 3 O | −0.759 | −0.703 | −0.847 | −0.841 | −22.284 | −22.274 | 1.759 | 1,770 |
| 4 O | −0.752 | −0.713 | −0.846 | −0.842 | −22.291 | −22.283 | 1.763 | 1,769 |
| 5 O | −0.661 | −0.669 | −1.055 | −1.065 | −22.332 | −22.341 | 1.489 | 1,478 |
| 6 O | −0.662 | −0.673 | −1.055 | −1.066 | −22.339 | −22.350 | 1.488 | 1,476 |
| 7 O | −0.484 | −0.502 | −0.925 | −0.944 | −22.345 | −22.363 | 1.670 | 1,638 |
| 8 O | −0.479 | −0.508 | −0.918 | −0.942 | −22.345 | −22.364 | 1.679 | 1,641 |
| 9 O | −0.489 | −0.504 | −0.926 | −0.945 | −22.352 | −22.373 | 1.667 | 1,637 |
| 10 O | −0.476 | −0.500 | −0.917 | −0.941 | −22.353 | −22.373 | 1.681 | 1,641 |
| 11N | −0.559 | −0.579 | −0.478 | −0.459 | −18.363 | −18.367 | 3.074 | 3,073 |
| 12C | −0.215 | −0.521 | −0.291 | −0.294 | −14.721 | −14.720 | 3.958 | 3,958 |
| 13C | −0.052 | 0.124 | −0.026 | −0.028 | −14.733 | −14.728 | 4.003 | 4,003 |
| 14C | 0.179 | 0.296 | −0.029 | −0.024 | −14.739 | −14.737 | 4.004 | 4,005 |
| 15C | 0.575 | 0.757 | 0.242 | 0.233 | −14.696 | −14.698 | 3.988 | 3,992 |
| 16C | −0.043 | −0.122 | −0.217 | −0.215 | −14.742 | −14.736 | 3.947 | 3,947 |
| 17C | −0.233 | −0.231 | −0.220 | −0.218 | −14.746 | −14.745 | 3.949 | 3,948 |
| 18C | −0.071 | −0.202 | −0.226 | −0.227 | −14.746 | −14.739 | 3.934 | 3,936 |
| 19C | −0.105 | −0.272 | −0.205 | −0.204 | −14.751 | −14.749 | 3.938 | 3,940 |
| 20C | −0.418 | −0.520 | −0.262 | −0.265 | −14.730 | −14.731 | 3.944 | 3,944 |
| 21C | −0.380 | −0.286 | −0.255 | −0.249 | −14.744 | −14.737 | 3.940 | 3,940 |
| 22C | −0.288 | −0.209 | −0.257 | −0.250 | −14.752 | −14.747 | 3.939 | 3,943 |
| 23C | −0.336 | −0.243 | −0.253 | −0.248 | −14.742 | −14.736 | 3.949 | 3,946 |
| 24C | −0.290 | −0.210 | −0.255 | −0.245 | −14.749 | −14.748 | 3.949 | 3,944 |
| 25C | 0.575 | 0.478 | 0.284 | 0.280 | −14.686 | −14.678 | 3.905 | 3,900 |
| 26C | 0.505 | 0.430 | 0.290 | 0.279 | −14.691 | −14.689 | 3.905 | 3,900 |
| 27C | 0.105 | 0.136 | −0.193 | −0.195 | −14.719 | −14.720 | 3.943 | 3,944 |
| 28C | 0.297 | 0.288 | 0.034 | 0.032 | −14.703 | −14.706 | 3.927 | 3,927 |
| 29C | −0.367 | −0.377 | −0.279 | −0.280 | −14.729 | −14.731 | 3.943 | 3,943 |
| 30H | 0.064 | 0.127 | 0.252 | 0.256 | −1.118 | −1.114 | 0.939 | 0,937 |
| 31H | 0.120 | 0.133 | 0.234 | 0.236 | −1.111 | −1.105 | 0.947 | 0,946 |
| 32H | 0.146 | 0.136 | 0.231 | 0.232 | −1.115 | −1.113 | 0.948 | 0,948 |
| 33H | 0.132 | 0.161 | 0.256 | 0.255 | −1.118 | −1.111 | 0.937 | 0,938 |
| 34H | 0.126 | 0.201 | 0.252 | 0.249 | −1.124 | −1.123 | 0.938 | 0,940 |
| 35H | 0.163 | 0.184 | 0.240 | 0.238 | −1.096 | −1.096 | 0.944 | 0,945 |
| 36H | 0.201 | 0.184 | 0.257 | 0.258 | −1.110 | −1.103 | 0.936 | 0,936 |
| 37H | 0.199 | 0.164 | 0.260 | 0.253 | −1.118 | −1.112 | 0.935 | 0,938 |
| 38H | 0.166 | 0.156 | 0.241 | 0.246 | −1.106 | −1.100 | 0.944 | 0,941 |
| 39H | 0.159 | 0.165 | 0.240 | 0.252 | −1.113 | −1.114 | 0.945 | 0,939 |
| 40H | 0.100 | 0.094 | 0.242 | 0.241 | −1.092 | −1.092 | 0.943 | 0,943 |
| 41H | 0.053 | 0.065 | 0.224 | 0.228 | −1.107 | −1.111 | 0.951 | 0,950 |
| 42H | 0.161 | 0.159 | 0.243 | 0.242 | −1.095 | −1.096 | 0.943 | 0,943 |
| 43 Na | 0.908 | 0.910 | 0.919 | 0.925 | −35.350 | −35.329 | 0.165 | 0,151 |
| 44 Na | 0.912 | 0.915 | 0.920 | 0.925 | −35.358 | −35.338 | 0.164 | 0,151 |
Fig. 4Calculated electrostatic potential surfaces on the molecular surface of anhydrous sodium picosulfate in gas phase. Color ranges, in au: from red −1.186 to blue ++1.186. B3LYP functional and 6-31G* basis set. Isodensity value of 0.005.
Main delocalization energy (in kJ/mol) for anhydrous picosulfate in gas and in aqueous solution phases at B3LYP/6-31G* level of theory.
| Delocalization | Gas | PCM |
|---|---|---|
| 53.80 | 55.26 | |
| 115.16 | 112.15 | |
| 85.10 | 84.52 | |
| 88.91 | 90.04 | |
| 83.77 | ||
| 85.48 | ||
| 86.65 | ||
| 89.83 | ||
| 82.01 | 84.14 | |
| 87.65 | 88.74 | |
| 81.93 | ||
| 86.86 | ||
| 81.38 | ||
| 89.62 | ||
| 119.34 | 117.54 | |
| 71.94 | 70.85 | |
| 82.93 | ||
| 79.42 | ||
| 81.30 | 80.13 | |
| 81.55 | 83.26 | |
| 80.05 | ||
| 84.43 | ||
| 68.55 | 67.46 | |
| 95.01 | 95.09 | |
| 59.52 | 62.28 | |
| 57.93 | 57.43 | |
| 116.16 | 102.66 | |
| 59.60 | 60.53 | |
| 57.85 | 59.23 | |
| 115.70 | 102.24 | |
| 70.81 | 64.58 | |
| 76.16 | 75.20 | |
| 185.13 | 153.40 | |
| 71.94 | 64.62 | |
| 76.66 | 75.78 | |
| 188.60 | 155.83 | |
| 70.51 | 64.41 | |
| 76.03 | 75.32 | |
| 183.96 | 153.65 | |
| 72.06 | 64.66 | |
| 76.87 | 75.57 | |
| 188.64 | 154.87 | |
| 42.26 | ||
| 61.15 | ||
| 69.97 | ||
| 71.23 | 92.25 | |
| 70.85 | 93.04 | |
| 71.60 | 92.59 | |
| 70.39 | 92.33 | |
| 1075.84 | 1116.56 | |
| 884.44 | 748.55 | |
| 158.13 | ||
| 1107.11 | ||
| 184.21 | ||
| 1078.31 | ||
Analysis of the topological properties for sodium picosulfate in both media by using the B3LYP/6-31G* method.
| Parameter | S1⋯O3 | S1⋯O5 | S1⋯O7 | S1⋯O8 | Na43⋯O3 | Na43⋯O5 | O7⋯H36 | N11⋯H33 | N11⋯H34 | S2⋯O4 | S2⋯O6 | S2⋯O9 | S2⋯O10 | Na44⋯O4 | Na44⋯O6 | O9⋯H37 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ρ(rc) | 0.1544 | 0.2682 | 0.2865 | 0.2872 | 0.0267 | 0.0317 | 0.0069 | 0.0140 | 0.0084 | 0.1549 | 0.2683 | 0.2863 | 0.2874 | 0.0268 | 0.0314 | 0.0076 |
| ▿2ρ(rc) | −0.0910 | 0.6997 | 1.0500 | 1.0644 | 0.1920 | 0.2235 | 0.0273 | 0.0462 | 0.0304 | −0.0940 | 0.6999 | 1.0466 | 1.0669 | 0.1882 | 0.2204 | 0.0292 |
| λ1 | −0.2328 | −0.4491 | −0.4872 | −0.4884 | −0.0348 | −0.0438 | −0.0047 | −0.0137 | −0.0062 | −0.2330 | −0.4493 | −0.4869 | −0.4887 | −0.0351 | −0.0432 | −0.0063 |
| λ2 | −0.2211 | −0.4199 | −0.4395 | −0.4398 | −0.0325 | −0.0406 | −0.0012 | −0.0122 | −0.0016 | −0.2215 | −0.4206 | −0.4399 | −0.4403 | −0.0328 | −0.0400 | −0.0036 |
| λ3 | 0.3629 | 1.5688 | 1.9768 | 1.9927 | 0.2544 | 0.3079 | 0.0333 | 0.0721 | 0.0382 | 0.3605 | 1.5698 | 1.9734 | 1.9960 | 0.2561 | 0.3037 | 0.0391 |
| ǀλ1ǀ/λ3 | 0.6415 | 0.2863 | 0.2465 | 0.2451 | 0.1368 | 0.1423 | 0.1411 | 0.1900 | 0.1623 | 0.6463 | 0.2862 | 0.2467 | 0.2448 | 0.1371 | 0.1422 | 0.1611 |
| Distance | 1.810 | 1.500 | 1.461 | 1.460 | 2.191 | 2.151 | 2.743 | 2.376 | 2.742 | 1.807 | 1.500 | 1.461 | 1.459 | 2.190 | 2.156 | 2.665 |
| Parameter | S1⋯O3 | S1−O5 | S1−O7 | S1−O8 | Na43⋯O3 | Na43⋯O5 | N11⋯H33 | S2⋯O4 | S2−O6 | S2−O9 | S2−O10 | Na44⋯O4 | Na44⋯O6 | |||
| ρ(rc) | 0.1800 | 0.2716 | 0.2833 | 0.2835 | 0.0201 | 0.0247 | 0.0088 | 0.1804 | 0.2715 | 0.2833 | 0.2835 | 0.0202 | 0.0247 | |||
| ▿2ρ(rc) | −0.2020 | 0.7773 | 0.9332 | 0.9353 | 0.1252 | 0.1551 | 0.0302 | −0.2033 | 0.7852 | 0.9340 | −0.9330 | 0.1262 | 0.1554 | |||
| λ1 | −0.2623 | −0.4560 | −0.4741 | −0.4744 | −0.0236 | −0.0312 | −0.0073 | −0.2630 | −0.4560 | −0.4743 | −0.4741 | −0.0237 | −0.0312 | |||
| λ2 | −0.2476 | −0.4409 | −0.4367 | −0.4353 | −0.0227 | −0.0290 | −0.0031 | −0.2481 | −0.4412 | −0.4363 | −0.4355 | −0.0228 | −0.0290 | |||
| λ3 | 0.3081 | 1.6743 | 1.8440 | 1.8451 | 0.1715 | 0.2154 | 0.0410 | 0.3079 | 1.6757 | 1.8446 | 1.8427 | 0.1728 | 0.2157 | |||
| ǀλ1ǀ/λ3 | 0.8513 | 0.2724 | 0.2571 | 0.2571 | 0.1376 | 0.1448 | 0.1780 | 0.8542 | 0.2721 | 0.2571 | 0.2573 | 0.1372 | 0.1446 | |||
| Distance | 1.720 | 1.493 | 1.472 | 1.472 | 2.316 | 2.263 | 2.617 | 1.719 | 1.493 | 1.472 | 1.472 | 2.313 | 2.263 |
Calculated HOMO and LUMO orbitals, energy band gap, chemical potential (μ), electronegativity (χ), global hardness (η), global softness (S) and global electrophilicity index (ω) for sodium picosulfate in gas phase and in aqueous solution.
| B3LYP/6-31G* method | ||||||||
|---|---|---|---|---|---|---|---|---|
| Frontier orbitals (eV) | Sodium picosulfate | thione | thiol | Cidofovirc | brincidofovirc | |||
| Gas | PCM | Gas | PCM | Gas | PCM | Gas | Gas | |
| HOMO | −5.912 | −6.100 | −6.4443 | −6.4066 | −6.8847 | −6.9012 | −5.9366 | −5.5435 |
| LUMO | −1.949 | −2.173 | −2.7918 | −2.8545 | −2.6194 | −2.6679 | −0.6401 | −1.772 |
| GAP | −3.963 | −3.927 | −3.6525 | −3.5521 | −4.2653 | −4.2333 | −5.2965 | −3.7715 |
| Descriptors (eV) | ||||||||
| χ | −1.9815 | −1.9635 | −1.8263 | −1.7761 | −2.1327 | −2.1167 | −2.6483 | −1.8858 |
| μ | −3.9305 | −4.1365 | −4.61805 | −4.63055 | −4.7521 | −4.7846 | −3.2884 | −3.6578 |
| η | 1.9815 | 1.9635 | 1.8263 | 1.7761 | 2.1327 | 2.1167 | 2.6483 | 1.8858 |
| 0.2523 | 0.2546 | 0.2738 | 0.2815 | 0.2345 | 0.2362 | 0.1888 | 0.2651 | |
| ω | 3.8983 | 4.3572 | 5.8388 | 6.0364 | 5.2943 | 5.4076 | 2.0416 | 3.5474 |
| E; | −7.7883 | −8.1220 | −8.4337 | −8.2241 | −10.1345 | −10.1272 | −8.7087 | −6.8979 |
S = ½η;ω = μ2/2η; E = μ∗η.
χ = - [E(LUMO) − E(HOMO)]/2; μ = [E(LUMO) + E(HOMO)]/2; η = [E(LUMO) − E(HOMO)]/2;.
This work.
From [33],cFrom [38].
Fig. 5Structures of the different compounds compared with anhydrous sodium picosulfate in gas phase.
Observed in DMSO-d and calculated 1H chemical shifts (δ in ppm) for sodium picosulfate in gas phase and aqueous solution.
| H atom | Sodium picosulfate | Pred. | Exp | |
|---|---|---|---|---|
| Gas | PCM | |||
| 30-H | 5.15 | 5.55 | 5.51 | 2.50 |
| 31-H | 7.38 | 7.43 | 7.51 | 7.08 |
| 32-H | 7.40 | 7.27 | 7.51 | 7.20 |
| 33-H | 8.63 | 7.68 | 7.51 | 8.52 |
| 34-H | 8.32 | 7.56 | 7.51 | 7.74 |
| 35-H | 7.43 | 7.34 | 7.27 | 7.22 |
| 36-H | 7.58 | 7.63 | 7.08 | 7.24 |
| 37-H | 7.69 | 7.46 | 7.08 | 7.70 |
| 38-H | 7.19 | 7.31 | 7.08 | 5.57 |
| 39-H | 7.14 | 7.49 | 7.08 | 3.34 |
| 40-H | 7.74 | 7.68 | 7.69 | 7.72 |
| 41-H | 9.11 | 9.02 | 8.53 | 8.53 |
| 42-H | 7.28 | 7.22 | 7.21 | 7.05 |
This work GIAO/B3LYP/6-31G* Ref. to TMS.
From [39].
From [40].
Calculated 13C chemical shifts (δ in ppm) for sodium picosulfate in gas phase and in aqueous solution.
| C atoms | Sodium picosulfate | Pred. | |
|---|---|---|---|
| Gas | PCM | ||
| 12-C | 71.06 | 71.33 | 40.95 |
| 13-C | 144.70 | 144.35 | 141.23 |
| 14-C | 143.99 | 144.06 | 141.23 |
| 15-C | 167.12 | 168.38 | 162.39 |
| 16-C | 134.27 | 134.69 | 126.66 |
| 17-C | 133.04 | 133.64 | 126.66 |
| 18-C | 131.64 | 134.19 | 126.66 |
| 19-C | 134.88 | 135.96 | 126.66 |
| 20-C | 127.53 | 127.24 | 118.43 |
| 21-C | 127.54 | 128.19 | 121.75 |
| 22-C | 126.30 | 127.48 | 121.75 |
| 23-C | 127.23 | 127.93 | 121.75 |
| 24-C | 127.05 | 128.47 | 121.75 |
| 25-C | 154.03 | 153.24 | 151.67 |
| 26-C | 154.77 | 153.15 | 151.67 |
| 27-C | 138.95 | 138.53 | 136.80 |
| 28-C | 153.28 | 154.58 | 149.33 |
| 29-C | 124.73 | 124.23 | 123.37 |
This work GIAO/B3LYP/6-31G* Ref. to TMS.
From [41, 42].
Fig. 6Experimental available infrared spectra of sodium picosulfate hydrate (upper) taken from [43] and the corresponding anhydrous predicted in gas phase (medium) and in aqueous solution (bottom) by using B3LYP/6-31G* level of theory.
Observed and calculated wavenumbers (cm−1) and assignments for anhydrous sodium picosulfate in both media.
| Experimental | B3LYP/6-31G* Method | |||
|---|---|---|---|---|
| IR | Gas phase | Aqueous solution | ||
| solid | SQM | Assignments | SQM | Assignments |
| 3639w | νOH H2O | |||
| 3458m | νOH H2O | |||
| 3100 sh | 3103 | νC19-H34 | 3100 | νC18-H33 |
| 3096 | νC21-H36 | 3097 | νC21-H36 | |
| 3091 | νC18-H33 | 3096 | νC29-H42 | |
| 3084 | νC29-H42 | 3095 | νC24-H39 | |
| 3072 | νC20-H35 | 3086 | νC23-H38 | |
| 3069 | νC22-H37 | 3085 | νC20-H35 | |
| 3068w | 3068 | νC24-H39 | 3083 | νC19-H34 |
| 3068 | νC23-H38 | 3074 | νC27-H40 | |
| 3058 | νC27-H40 | 3072 | νC17-H32 | |
| 3047w | 3049 | νC16-H31 | 3070 | νC16-H31 |
| 3045 | νC17-H32 | 3059 | νC22-H37 | |
| 2999w | 3041 | νC28-H41 | 3057 | νC28-H41 |
| 2915w | 2932 | νC12-H30 | 2950 | νC12-H30 |
| 1653m | 1606 | νC16-C21 | 1600 | νC16-C21,νC23-C18 |
| 1616m | 1593 | νC27-C20 | 1592 | νC28-C29,νC20-C15 |
| 1600 sh | 1586 | νC24-C19,νC14-C17 | 1583 | νC18-C13,νC13-C16 |
| 1560 sh | 1579 | νC18-C13,νC13-C16 | 1580 | νC14-C17,νC26-C24 |
| 1541 sh | 1577 | νC29-C27 | 1571 | νC29-C27,νC15-N11 |
| 1529s | 1560 | νC19-C14,νC26-C24 | 1562 | νC19-C14,νC22-C26 |
| 1495m | 1502 | βC16-H31 | 1498 | βC16-H31,νC21-C25 |
| 1462m | 1479 | βC24-H39 | 1476 | βC28-H41,βC20-H35 |
| 1454m | 1476 | βC28-H41,βC20-H35 | 1471 | βC24-H39 |
| 1438w | 1436 | βC29-H42 | 1429 | βC29-H42 |
| 1420 | νC23-C18 | 1416 | ρC12-H30 | |
| 1405 | ρ’C12-H30,βC17-H32,βC19-H34 | 1396 | βC17-H32 | |
| 1347 sh | 1355 | βC28-H41 | 1345 | ρ’C12-H30 |
| 1324 | ρC12-H30 | 1327 | ρ’C12-H30,ρC12-H30 | |
| 1301s | 1306 | βC22-H37 | 1302 | βC19-H34 |
| 1271 sh | 1295 | νC25-C23,νC21-C25 | 1298 | νC25-C23 |
| 1284 | νC22-C26 | 1281 | νN11-C28 | |
| 1258 vs | 1274 | νaSO3(2) | 1266 | νN11-C28 |
| 1272 | νaSO3(1) | 1246 | νC19-C14,ρC12-H30 | |
| 1271 | νN11-C28 | 1240 | νC15-N11 | |
| 1226s | 1239 | νC15-N11 | 1192 | νC25-O3 |
| 1234 | ρC12-H30,νC19-C14 | 1190 | νaSO3(1) | |
| 1196sh | 1211 | νC25-O3 | 1190 | νaSO3(2) |
| 1183 sh | 1204 | νC26-O4 | 1185 | νC26-O4 |
| 1186 | νC20-C15 | 1184 | νC12-C15 | |
| 1177 | νaSO3(1) | 1176 | νC12-C13 | |
| 1175 | νaSO3(2) | 1159 | βC21-H36 | |
| 1166 sh | 1166 | νC12-C13 | 1158 | βC22-H37 |
| 1163 | βC23-H38 | 1152 | νC12-C14,νC24-C19 | |
| 1130 sh | 1161 | νaSO3(2),νC26-O4 | 1143 | νaSO3(2) |
| 1121w | 1157 | νC12-C14 | 1143 | βC27-H40 |
| 1151 | βC27-H40 | 1142 | νaSO3(1) | |
| 1105 | βC21-H36,βC18-H33 | 1101 | βC23-H38 | |
| 1086s | 1092 | βC29-H42,νC17-C22 | 1089 | νC17-C22 |
| 1073 sh | 1090 | νC17-C22 | 1088 | νC27-C20 |
| 1033m | 1044 | νC28-C29 | 1043 | νC29-C27 |
| 1009w | 1020 | βR1(1) | 1016 | βR1(1) |
| 996 | βR1(3) | 1012 | γC27-H40 | |
| 995 | γC27-H40 | 994 | βR1(3) | |
| 993 | βR1(2) | 992 | βR1(2) | |
| 979w | 975 | γC18-H33 | 980 | γC28-H41 |
| 965w | 966 | γC28-H41 | 972 | γC18-H33 |
| 952w | 949 | γC16-H31 | 963 | γC19-H34 |
| 892s | 948 | νsSO3(2) | 959 | γC16-H31 |
| 892s | 947 | νsSO3(1) | 951 | νsSO3(1) |
| 942 | γC24-H39 | 950 | νsSO3(2) | |
| 933 | γC17-H32 | 947 | γC17-H32 | |
| 900 | γC20-H35 | 911 | γC20-H35 | |
| 871m | 889 | γC22-H37 | 888 | γC24-H39 |
| 868 | γC23-H38 | 875 | γC23-H38 | |
| 842m | 854 | δC13C12C15 | 856 | δC13C12C15 |
| 826 sh | 837 | γC19-H34 | 836 | γC23-H38,γC24-H39 |
| 830 | νC26-O4 | 831 | γC23-H38 | |
| 828 | γC21-H36 | 829 | γC21-H36 | |
| 824 | γC19-H34 | 822 | γC24-H39 | |
| 811 | γC22-H37 | 816 | γC22-H37 | |
| 783m | 809 | δC13C12C14 | 806 | δC13C12C14 |
| 762m | 763 | γC29-H42 | 769 | γC29-H42 |
| 747w | 747 | tR1(3) | 752 | tR1(3) |
| 731w | 730 | tR1(2) | 729 | tR1(2) |
| 718w | 710 | tR1(1) | 711 | tR1(1) |
| 676 sh | 686 | βR2(3),βR3(3) | 681 | βR2(3) |
| 660m | 646 | βR2(1),βR3(1) | 644 | βR3(1) |
| 650w | 640 | βR2(3) | 642 | βR2(1) |
| 630 sh | 629 | βR2(2) | 631 | βR2(2) |
| 625w | 620 | βR3(3) | 626 | νS1-O3 |
| 610w | 610 | βR3(2) | 621 | βR3(2) |
| 598m | 600 | δsSO3(2) | 615 | νS2-O4 |
| 581w | 596 | δsSO3(1) | 608 | βR3(3) |
| 575 sh | 565 | tR1(1) | 565 | δsSO3(1) |
| 560 sh | 564 | tR1(2) | 563 | δsSO3(2) |
| 528 sh | 525 | δaSO3(1) | 523 | δaSO3(1) |
| 524 | δaSO3(2) | 522 | δaSO3(2) | |
| 521w | 519 | δaSO3(1) | 518 | δaSO3(2),γC26-O4 |
| 514 sh | 514 | δaSO3(2),γC26-O4 | 514 | δaSO3(1),γC25-O3,γC13-C12 |
| 500 sh | 490 | tR2(3),γC15-C12 | 498 | tR2(3) |
| 477 | tR2(2) | 473 | tR2(2) | |
| 458 sh | 468 | tR2(1) | 468 | tR2(1) |
| 429 sh | 437 | βC25-O3 | 441 | βC25-O3 |
| 421w | 422 | βC26-O4 | 435 | βC26-O4 |
| 412 | tR3(1) | 415 | tR3(1) | |
| 405w | 405 | tR3(3) | 408 | tR3(2) |
| 398w | 399 | tR3(2) | 407 | tR3(3) |
| 380 | νO6-Na44 | 373 | νS1-O3 | |
| 366 | ρSO3(1) | 355 | νS2-O4,tR1(2) | |
| 333 | νS2-O4 | 342 | ρSO3(1) | |
| 313 | νS1-O3 | 322 | ρSO3(2) | |
| 303 | ρ’sO3(1) | 310 | ρ’sO3(1) | |
| 294 | ρ’sO3(2) | 298 | ρ’sO3(2) | |
| 280 | νO5-Na43 | 257 | βC15-C12 | |
| 268 | ρSO3(2) | 248 | νO5-Na43,δS1O5Na43 | |
| 264 | δS1O5Na43 | 230 | νO5-Na43 | |
| 244 | βC15-C12 | 226 | νO6-Na44 | |
| 234 | ρ’sO3(2),βC15-C12 | 215 | βC14-C12 | |
| 206 | βC13-C12,βC14-C12 | 206 | βC13-C12 | |
| 179 | tR2(1),tR2(2) | 181 | tR2(2),tR2(1) | |
| 169 | tR2(2),νO5-Na43 | 155 | δC25O3S1 | |
| 145 | tR2(2),ρSO3(2) | 131 | δS1O5Na43 | |
| 134 | δC25O3S1 | 120 | δS2O6Na44 | |
| 92 | δC13C12C15 | 86 | δC26O4S2 | |
| 72 | γC25-O3 | 71 | δC26O4S2 | |
| 67 | δC26O4S2,δC14C12C15 | 67 | τwC25-O3 | |
| 50 | τNa44-O6 | 60 | τNa43-O5 | |
| 49 | τNa43-O5 | 59 | τNa44-O6 | |
| 47 | τNa43-O5,τwC15-C12 | 57 | τwC14-C12 | |
| 39 | twSO3(2) | 51 | τwC15-C12 | |
| 37 | twSO3(1) | 47 | τwC25-O3,τwC13-C12 | |
| 32 | τwC13-C12 | 35 | twSO3(2) | |
| 26 | τwC15-C12 | 29 | γC14-C12 | |
| 21 | τwC14-C12 | 27 | τwC13-C12 | |
| 13 | τwC26-O4 | 19 | twSO3(1) | |
| 11 | γC14-C12 | 18 | τwC13-C12,τwC14-C12 | |
| 4 | τwC25-O3 | 15 | τwC26-O4 | |
Abbreviations: ν, stretching; β, deformation in the plane; γ, deformation out of plane; wag, wagging; τ, torsion; βR, deformation ring τR, torsion ring; ρ, rocking; τw, twisting; δ, deformation; a, antisymmetric; s, symmetric; (1), glucopyranose Ring1; (2), glucopyranose Ring2.
This work.
From scaled quantum mechanics force field.
From [43].
Fig. 7Predicted Raman spectra of anhydrous sodium picosulfate in gas phase and in aqueous solution at B3LYP/6-31G* level of theory.
Comparison of scaled internal force constants for sodium picosulfate in both media with those calculated for compounds with similar groups.
| Force constant | B3LYP/6-31G* | B3P86/6-31G* | ||||
|---|---|---|---|---|---|---|
| Picosulfate | CrO2(SO3F)2 | BOSNa | K5[B(SO4)4] | |||
| Gas | PCM | Gas | Gas | Force constant | Gas | |
| 8.25 | 7.79 | 10.6 | 7.27 | 8.7 | ||
| 1.65 | 2.37 | 4.7 | 4.3 | |||
| 6.50 | 6.51 | 6.48 | ||||
| 7.03 | 6.87 | 8.17 | ||||
| 3.97 | 4.00 | |||||
| 5.33 | 5.01 | 5.72 | ||||
| 0.88 | 0.52 | 0.82 | 1.42 | |||
| 5.18 | 5.21 | |||||
| 1.72 | 1.59 | 1.6 | 1.91 | 2.0 | ||
| 0.87 | 0.95 | |||||
| 1.83 | 1.93 | |||||
| 2.56 | 1.33 | 0.40 | ||||
Units are mdyn Å−1 for stretching and mdyn Å rad−2 for angle deformations, A6, pyridinyl and phenyl Rings.
This work.
From [3].
From [4] for benzisoxazole methane sulfonic acid sodium salt (BOSNa); X = (O,F).
Fig. 8Comparisons between the experimental available UV-Vis spectrum of sodium picosulfate hydrate (upper) taken from [47] and the theoretical spectrum of the anhydrous form (bottom) by using B3LYP/6-31G* level of theory.
TD-DFT calculated visible absorption wavelengths (nm) and oscillator strengths (f) for sodium picosulfate in aqueous solution.
| B3LYP6-31G*,a | Experimentalb | |||
|---|---|---|---|---|
| Energy Transition | λ(nm) | f | λ(nm) | Assignment |
| 5.9557 | 208.18 | 0.1042 | 157.00 sh | π→π* (C=C) |
| 5.2871 | 234.50 | 0.1413 | 262.54 s | π→π* (C-N) |
| 5.1603 | 240.26 | 0.1700 | 268.80 sh | π*→π*(C=C) |
This work.