Literature DB >> 27837089

The Arabidopsis Polycomb Repressive Complex 1 (PRC1) Components AtBMI1A, B, and C Impact Gene Networks throughout All Stages of Plant Development.

Wiam Merini1,2,3, Francisco J Romero-Campero1,2,3, Angeles Gomez-Zambrano1,2,3, Yue Zhou1,2,3, Franziska Turck1,2,3, Myriam Calonje4,5,6.   

Abstract

Polycomb Group regulation in Arabidopsis (Arabidopsis thaliana) is required to maintain cell differentiation and allow developmental phase transitions. This is achieved by the activity of three PcG repressive complex 2s (PRC2s) and the participation of a yet poorly defined PRC1. Previous results showed that apparent PRC1 components perform discrete roles during plant development, suggesting the existence of PRC1 variants; however, it is not clear in how many processes these components participate. We show that AtBMI1 proteins are required to promote all developmental phase transitions and to control cell proliferation during organ growth and development, expanding their proposed range of action. While AtBMI1 function during germination is closely linked to B3 domain transcription factors VAL1/2 possibly in combination with GT-box binding factors, other AtBMI1 regulatory networks require participation of different factor combinations. Conversely, EMF1 and LHP1 bind many H3K27me3 positive genes up-regulated in atbmi1a/b/c mutants; however, loss of their function affects expression of a different subset, suggesting that even if EMF1, LHP1, and AtBMI1 exist in a common PRC1 variant, their role in repression depends on the functional context.
© 2017 American Society of Plant Biologists. All Rights Reserved.

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Year:  2016        PMID: 27837089      PMCID: PMC5210725          DOI: 10.1104/pp.16.01259

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  78 in total

1.  JASPAR: an open-access database for eukaryotic transcription factor binding profiles.

Authors:  Albin Sandelin; Wynand Alkema; Pär Engström; Wyeth W Wasserman; Boris Lenhard
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 2.  The age of multiplexity: recruitment and interactions of Polycomb complexes in plants.

Authors:  Alexander Förderer; Yue Zhou; Franziska Turck
Journal:  Curr Opin Plant Biol       Date:  2016-01-28       Impact factor: 7.834

Review 3.  Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins.

Authors:  Leonie Ringrose; Renato Paro
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

Review 4.  A new world of Polycombs: unexpected partnerships and emerging functions.

Authors:  Yuri B Schwartz; Vincenzo Pirrotta
Journal:  Nat Rev Genet       Date:  2013-11-12       Impact factor: 53.242

5.  Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3.

Authors:  Gang Wu; R Scott Poethig
Journal:  Development       Date:  2006-08-16       Impact factor: 6.868

6.  agriGO: a GO analysis toolkit for the agricultural community.

Authors:  Zhou Du; Xin Zhou; Yi Ling; Zhenhai Zhang; Zhen Su
Journal:  Nucleic Acids Res       Date:  2010-04-30       Impact factor: 16.971

7.  Epigenetic regulation of gene programs by EMF1 and EMF2 in Arabidopsis.

Authors:  Sang Yeol Kim; T Zhu; Z Renee Sung
Journal:  Plant Physiol       Date:  2009-09-25       Impact factor: 8.340

8.  Interaction of Polycomb-group proteins controlling flowering in Arabidopsis.

Authors:  Yindee Chanvivattana; Anthony Bishopp; Daniel Schubert; Christine Stock; Yong-Hwan Moon; Z Renee Sung; Justin Goodrich
Journal:  Development       Date:  2004-09-29       Impact factor: 6.868

9.  AGRIS: Arabidopsis gene regulatory information server, an information resource of Arabidopsis cis-regulatory elements and transcription factors.

Authors:  Ramana V Davuluri; Hao Sun; Saranyan K Palaniswamy; Nicole Matthews; Carlos Molina; Mike Kurtz; Erich Grotewold
Journal:  BMC Bioinformatics       Date:  2003-06-23       Impact factor: 3.169

10.  Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements.

Authors:  Hua Wang; Chunmei Liu; Jingfei Cheng; Jian Liu; Lei Zhang; Chongsheng He; Wen-Hui Shen; Hong Jin; Lin Xu; Yijing Zhang
Journal:  PLoS Genet       Date:  2016-01-13       Impact factor: 5.917

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  17 in total

1.  PcG Proteins MSI1 and BMI1 Function Upstream of miR156 to Regulate Aerial Tuber Formation in Potato.

Authors:  Amit Kumar; Kirtikumar Ramesh Kondhare; Pallavi Vijay Vetal; Anjan Kumar Banerjee
Journal:  Plant Physiol       Date:  2019-08-19       Impact factor: 8.340

Review 2.  Molecular and epigenetic regulations and functions of the LAFL transcriptional regulators that control seed development.

Authors:  L Lepiniec; M Devic; T J Roscoe; D Bouyer; D-X Zhou; C Boulard; S Baud; B Dubreucq
Journal:  Plant Reprod       Date:  2018-05-24       Impact factor: 3.767

3.  The B3-Domain Transcription Factor VAL1 Regulates the Floral Transition by Repressing FLOWERING LOCUS T.

Authors:  Yanjun Jing; Qiang Guo; Rongcheng Lin
Journal:  Plant Physiol       Date:  2019-07-09       Impact factor: 8.340

Review 4.  Genetic and epigenetic modes of the regulation of somatic embryogenesis: a review.

Authors:  Iyyakkannu Sivanesan; Safia Nayeem; Baskar Venkidasamy; Sree Preethy Kuppuraj; Chithraanjane Rn; Ramkumar Samynathan
Journal:  Biol Futur       Date:  2022-07-13

5.  BLISTER promotes seed maturation and fatty acid biosynthesis by interacting with WRINKLED1 to regulate chromatin dynamics in Arabidopsis.

Authors:  Ruihua Huang; Mengling Liu; Guanping Gong; Pingzhi Wu; Mei Bai; Hongting Qin; Guohe Wang; Huimei Liao; Xiaoxiu Wang; Yanqun Li; Hong Wu; Xiaojing Wang; Chengwei Yang; Daniel Schubert; Shengchun Zhang
Journal:  Plant Cell       Date:  2022-05-24       Impact factor: 12.085

Review 6.  A transcriptional view on somatic embryogenesis.

Authors:  Anneke Horstman; Marian Bemer; Kim Boutilier
Journal:  Regeneration (Oxf)       Date:  2017-12-05

Review 7.  Developmental transitions: integrating environmental cues with hormonal signaling in the chromatin landscape in plants.

Authors:  Jun Xiao; Run Jin; Doris Wagner
Journal:  Genome Biol       Date:  2017-05-10       Impact factor: 13.583

8.  H2A monoubiquitination in Arabidopsis thaliana is generally independent of LHP1 and PRC2 activity.

Authors:  Yue Zhou; Francisco J Romero-Campero; Ángeles Gómez-Zambrano; Franziska Turck; Myriam Calonje
Journal:  Genome Biol       Date:  2017-04-12       Impact factor: 13.583

9.  Removal of H2Aub1 by ubiquitin-specific proteases 12 and 13 is required for stable Polycomb-mediated gene repression in Arabidopsis.

Authors:  Lejon E M Kralemann; Shujing Liu; Minerva S Trejo-Arellano; Rafael Muñoz-Viana; Claudia Köhler; Lars Hennig
Journal:  Genome Biol       Date:  2020-06-16       Impact factor: 13.583

Review 10.  Genetic and molecular basis of floral induction in Arabidopsis thaliana.

Authors:  Atsuko Kinoshita; René Richter
Journal:  J Exp Bot       Date:  2020-05-09       Impact factor: 6.992

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