Literature DB >> 27833434

Genetic variability of two ecomorphological forms of Stenus Latreille, 1797 in Iran, with notes on the infrageneric classification of the genus (Coleoptera, Staphylinidae, Steninae).

Sayeh Serri1, Johannes Frisch2, Thomas von Rintelen2.   

Abstract

In this study, the genetic diversity of Iranian populations of two widespread Stenus species representing two ecomorphological forms, the "open living species" Stenus erythrocnemus Eppelsheim, 1884 and the "stratobiont" Stenus callidus Baudi di Selve, 1848, is presented using data from a fragment of the mitochondrial COI gene. We evaluate the mitochondrial cytochrome oxidase I haplotypes and the intraspecific genetic distance of these two species. Our results reveal a very low diversity of COI sequences in Stenus erythrocnemus in contrast to Stenus callidus. Moreover, the COI based phylogeny of a selection of Iranian Stenus support the monophyly of some species groups of Stenus proposed by Puthz (2008) and contradicts the traditional infrageneric classification.

Entities:  

Keywords:  Iran; Staphylinidae; Stenus; ecomorphological forms; genetic variability; infrageneric classification

Year:  2016        PMID: 27833434      PMCID: PMC5096372          DOI: 10.3897/zookeys.626.8155

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


Introduction

Fast mutation rate and lack of recombination as well as its easy amplification and sequencing make COI a useful marker for the study of phylogeny, geographic variation and population genetics as well as species identification (Hebert et al. 2003a, b; Qian et al. 2014: 11). Many studies have demonstrated that mtDNA-COI can be used for population genetics (e.g. Szalanski et al. 2010: 8). Hajibabaei et al. (2007: 171) point out that DNA barcoding offers significant implications for the understanding of the genetic diversity of species. Here, we apply this method in the rove beetle genus Latreille, 1797 to test the infraspecific genetic variation of representatives of two distinct ecomorphological forms and the validity of the traditional subgeneric concept of the genus. is well-known for its unique prey-capture behavior (e.g. Betz 1996: 15–34). The eversible labium, an apomorphy, and the variability of the tarsal structures seem to be responsible for the enormous radiation in this genus (Betz 2002: 1097). The labial features are involved in catching prey in a sudden manner despite the limited reaction ability of the beetle (Betz 1999: 1708). The variable tarsal morphology among the members of this genus also has adaptive values which are in accord with their habitat preferences (Betz 2006: 413–414). With about 2674 species (Puthz, unpublished), is one of the species-richest genera of animals in the world (Puthz 2012: 286). The members of this rove beetle clade mostly dwell in humid places such as river banks, swamps, bogs and wet grasslands. The multifunctional secretion of the pygidial glands is species-specific and acts as a survival factor against predators. This character has been used in illuminating several evolutionary trends (Schierling et al. 2013: 48, 51) and presumably is a character adaptive to the habitat where the species live (Lang et al. 2015: 22). In , two major ecomorphological forms can be distinguished, which Kastcheev and Puthz (2011: 454) termed “open-living species” with longer legs and on average bigger bodies (Figure 1), that live in habitats with less dense, often sparse vegetation such as sandy or clayey banks, and “stratobionts” with shorter legs and compact body (Figure 2), which inhabit dense vegetation structures and organic litter. Both forms are moreover distinguished by their dispersal ability, because - unlike the open-living species - there is the evolutionary tendency in stratobionts towards flightlessness. Similar morphological adaptations were already described for many rove-beetle clades such as the paederine subtribe Mulsant & Rey, 1878 (Frisch et al. 2002: 30). The addressed morphological characters determine the ability of the organism to colonize particular habitats and to use their resources (Betz 2006: 413). This relation between morphological features of species and ecological characteristics of habitats seems to be descriptive for niche selection. In Iran, 68 species were recorded (Serri and Frisch 2016: 18), among which Eppelsheim, 1884 and Baudi di Selve, 1848 are the most widespread across the country and were found in most provinces of Iran. According to Kastcheev and Puthz (2011: 454), is an open-living species and a stratobiont. Based on Iranian populations of these species, we tested the hypothesis that open-living species show a lower infraspecific genetic diversity than stratobionts owing to their higher dispersal ability.
Figures 1–4.

1 Eppelsheim, 1884. 2 Baudi di Selve, 1848. 3 Haplotype network for DNA sequences of . The circle size shows the frequency of the haplotypes. Each dashed line represents a single mutation. 4 Haplotype network for DNA sequences of . The circle size shows the frequency of the haplotypes. Each dashed line represents a single mutation. Scale bars: 1mm.

cytochrome c oxidase subunit I

cytochrome c oxidase subunit I

1 Eppelsheim, 1884. 2 Baudi di Selve, 1848. 3 Haplotype network for DNA sequences of . The circle size shows the frequency of the haplotypes. Each dashed line represents a single mutation. 4 Haplotype network for DNA sequences of . The circle size shows the frequency of the haplotypes. Each dashed line represents a single mutation. Scale bars: 1mm. cytochrome c oxidase subunit I cytochrome c oxidase subunit I was traditionally divided into subgenera according to morphological characters. Based on European species only, Rey (1884: 31) introduced the six subgenera , , , , , and . Later, Heyden (1905: 262) replaced with because of a homonymy with a genus in the . Ádám (1987: 135), however, synonymized with the older name Motschulsky, 1860, because the type species of both subgenera are considered as subjective synonyms. Therefore he introduced the new subgenus for a distinct species group of (Herman 2001: 2041), but later he (Ádám 2001: 126) replaced this name with because of primary homonymy with Walker, 1834 in the . According to Puthz (2009: 47), the genus group name Özdikmen & Darılmaz, 2008, an unnecessary replacement name for , is a junior synonym of . Puthz (2001: 35) also synonymized with s. str. based on the assumption that the tarsal characters traditionally employed for these subgenera do not define distinct monophyletic groups. In the current edition of the Catalogue of Palaearctic , Schülke and Smetana (2015: 802–847) still divided this genus into five subgenera, which are Motschulsky, 1860, Rey, 1884, Latreille, 1797, PageBreak Ádám, 2001 and Rey, 1884. Puthz (2008: 139–148) conceived that the traditional subgeneric classification does not reflect the phylogenetic affinities within this genus and thus established 157 monophyletic species groups based on a wide range of presumed apomorphic morphological features of the species included. Ryvkin (2011: 59) argued, however, that it is better not to reject the traditional subgeneric concept prior to a comprehensive phylogenetic analysis of the subfamily. To date, there are only a few molecular studies that have investigated the phylogenetic relationships among species. The first was done recently by Koerner et al. (2013). Their results supported the monophyletic groups proposed by Puthz (2008: 139–148) and moreover revealed that some species groups of Leach, 1819, the second genus of the , actually constitute a monophyletic group within . The monophyly of some species groups proposed by Puthz (2008: 141–147) was also supported by Lang et al. (2015: 21). We performed a preliminary investigation on the intra- and interspecific genetic diversity of some Iranian to test the validity of the traditional classification of this genus by sequencing the “DNA Barcode” region of the mitochondrial COI gene of these species.

Material and methods

The specimens this study is based on were collected in the framework of the first author’s research project on the diversity and biogeography of this genus in Iran (Serri and Frisch 2016), which was a part of a joint project between the Museum für Naturkunde Berlin and the Iranian Research Institute of Plant Protection on biodiversity and biogeography of selected insect taxa in Iran. The specimens were collected in humid habitats such as river banks or grassland by hand collecting or sifting of gravelly soil, leaf litter and other phytodebris. Most specimens were killed with ethyl acetate, but some were directly fixated in 96% ethanol. For DNA extraction, the abdomen of the larger species and the whole body of the smaller species were used and the DNA was purified by the CTAB method (Winnepenninckx et al. 1993). The was used to amplify a 5’ end fragment of the mitochondrial gene using the primer pair LCO1490 5’-GGTCAACAAATCATAAAGATATTGG -3’ and HCO2198 5’-TAAACTTCAGGGTGACCAAAAAATCA -3’ (Folmer et al. 1994). PCR was performed in 25µl volumes including 2.5 µM PCR buffer, 1µM MgCl2, 0.5 µM dNTP, 1 µM of each forward and reverse primers, 1µM of Taq polymerase and ddH2O up to 25 µl total volumes. In the PCR thermocycles, there was an initial denaturation step at 94° for 1.5 min, followed by 6 cycles of 94° (for 30 s) denaturation, 45° (1.5 min) annealing and 72° (for 1 min) extension and subsequently 35 cycles of 94° (for 30 s) denaturation, 51° (1.5 min) annealing and 72° (for 1 min) extension. The PCR terminated at 72° (for 5 min) for final extension. The PCR products were purified on a silica membrane with Macherey and Nagel Nucleospin kits following the manufacturer’s protocol. The purified PC products were sequenced using an ABI 3130 DNA PageBreakPageBreakPageBreaksequencer. All sequences were aligned manually and corrected for misreads using Bioedit version 7.0.5.3 (Hall 1999). Additional mitochondrial COI GenBank sequences of (Lacordaire, 1835) and Peyerimhoff, 1937 were included in the dataset (GenBank accession numbers KM447120 and KM451370) as PageBreakoutgroup taxa. A Maximum Parsimony Analysis was conducted with PAUP*4.0 b10 (Swofford 2002). The dataset was also analyzed in MEGA 6 (Tamura et al. 2013) with maximum likelihood using the Tamura-Nei model with uniform rates among sites. The mean p-distance within each species of and were calculated separately using the Kimura2-parameter model (Kimura 1980) in MEGA 6. The haplotype data files of the populations of each species and the polymorphisms indices were obtained in DnaSP 5.10 (Librado and Rozas 2009) and the nexus files were transferred to PopART version 1.7 (Leigh and Bryant 2015) in order to construct a haplotype network based on the TCS algorithm (Clement et al. 2002). polymerase chain reaction cytochrome c oxidase subunit I

Results

The PCR amplification using LCO1490/HCO2198 primers yielded a product with a maximum length of 658 bp (excluding primers) from 91 individuals of 23 species out of a total of 157 specimens of 37 species of Iranian . The alignment was blasted against GenBank sequences and found to match with existing records of . The base composition of about 29% A, 39% T, 16% C and 16% G exhibits the common AT bias of COI. The alignment (total of 658 bp) contained 294 variable characters, of which 246 were parsimony informative and contributed to the Analysis. The MP Analyses produced two equally parsimonious trees with a tree length of 1197 steps, CI of 0.3768, RI of 0.8564 and RC of 0.3227 (Figure 7). Node support was estimated by bootstrap using 1000 pseudoreplicates and 100 replicates. The major clades are generally well supported (see below). All obtained sequences were submitted to GenBank (accession numbers in Table 1). The maximum likelihood tree was constructed by the heuristic search with the method, gaps treatment using all sites, the tree as the initial tree and bootstrapped with 1000 replications (Figure 8). The topology obtained from ML analyses does not deviate significantly from the MP tree. Both methods reveal a high degree of genetic homogeny among different populations of and more pronounced heterogeny in . The selected populations of cluster in seven groups, but these groupings do not correspond well to the geographic distribution of the examined populations and some are not well supported in the bootstrap analysis. There are, however, some populations that form separate geographical clusters such as the populations from Kerman (specimen no. 034) with those of the Ghohrud Mountains (specimen no. 094) and the populations from Tehran Province (specimens no. 105, 107). These apparent geographical clusters are, however, not significant, because they are made up of only two populations from the same region (Figure 9). Surprisingly, the populations of from Kordestan Province show a low similarity of the COI gene and appear in different clades of the cladogram (Figures 7, 8).
Figure 7.

Strict consensus of most-parsimonious trees. Values above the branches indicate clade bootstrap support (>50) using 1000 replicates. The geographical origin of the specimens is coded by numbers behind the species name which correspond to the geographical information in Table 1.

Table 1.

The specimens used in this study with their location data and the GenBank association number of submitted sequences of COI. The specimen number codes the geographical origin of the specimens in the phylogenetic tree (Figures 7, 8).

SpeciesSpecimen numberCollection siteGeneBank association number
Stenus alienigenus 147 Kordestan: 11 km E Sanandaj (35°20'11"N 47°09'07"E), 2100 m, 5.9.2008, leg. Serri and Frisch KU754268
Stenus araxis 118 Ardabil: N Mt Sabalan, Gheynarjeh (38°17'18"N 47°41'22"E), 2100 m, 24.6.2008, leg. Serri KU754251
Stenus araxis 121, 122 Esfahan: Kashan, NW Niasar, after Aznaveh (34°06'28.8"N 50°59'45.9"E), 2195 m, 19.5.2009, leg. Serri and Nasserzadeh KU754253 KU754254
Stenus araxis 117 Hamedan: W Kabudarahang, 5 km E Goltappeh (35°12'06"N 48°14'04"E), 2210 m, 21.7.2008, leg. Serri and Nasserzadeh KU754250
Stenus araxis 114 Kordestan: Saghez - Baneh, 27 km SW Saghez (36°08'12"N 46°02'42"E), 1600 m, 3.9.2008, leg. Serri and Frisch KU754247
Stenus araxis 111 West Azarbaijan: W Salmas, 19 km W Kuzerash (38°11'40"N 44°33'04"E), 1960 m, 31.8.2008, leg. Serri and Frisch KU754246
Stenus araxis 110 West Azarbaijan: Orumieh, S Silvaneh, 14 km S Ziveh (37°09'06"N 44°52'55"E), 2320 m, 1.9.2008, leg. Serri and Frisch KU754245
Stenus cf. araxis 120 Esfahan: Natanz, S Karkas Mts, Taragh (33°24'39"N 51°46'14"E), 2580 m, 20.5.2009, leg. Serri KU754252
Stenus cf. araxis 125 Esfahan: S Abyaneh, Bidhand (33°29'44"N 51°45'39"E), 2350 m, 18.5.2009, leg. Serri KU754256
Stenus cf. araxis, Stenus araxis 115, 116 Tehran: Firouzkuh, Badroud (35°48'15"N 52°39'21"E), 2060 m, 5.8.2009, leg. Serri and Nasserzadeh KU754248 KU754249
Stenus ater 136 Semnan: NE Chashm, Hikuh, Sheil, Parvar Protected Region (36°0'54"N 53°23'07"E), 1900 m, 7.8.2009, leg. Serri and Nasserzadeh KU754264
Stenus brunnipes 151 Mazandaran: Sari, N Mohammadabad (36°10'09"N 53°14'08"E), 820 m, 30.5.2008, leg. Serri, Nasserzadeh and Pütz KU754270
Stenus callidus 089 Chaharmahal & Bakhtiari: Ardel, Ghahrou, Tang-e Zeverdegan (31°59'10"N 50°51'23"E), 2350 m, 23.6.2009, leg. Serri KU754233
Stenus callidus 090 Esfahan: Chadegan, W Zayandehrud Dam (32°43'08"N 50°44'20"E), 2070 m, 20.6.2009, leg. Serri KU754234
Stenus callidus 094 Esfahan: Kashan, S Ghamsar, Ghazaan (33°42'20"N 51°23'48"E), 2220 m, 17.5.2009, leg. Serri KU754236
Stenus callidus 045, 046 Ghazvin: 5 km E Abgarm (35°47'53"N 49°22'43"E), 1510 m, 21.6.2004, leg. Serri and Frisch KU754199 KU754200
Stenus callidus 092 Hamedan: Eberou road, S Emamzadeh Abdollah (34°39'20"N 48°32'19"E), 2510 m, 22.7.2008, leg. Serri and Nasserzadeh KU754235
Stenus callidus 103 Hamedan: Shahrestaneh (34°42'56"N 48°22'21"E), 2220 m, 23.7.2008, leg. Serri and Nasserzadeh KU754240
Stenus callidus 031, 033 Hormozgan: Siahu, Talgerdo road, Bangolan (27°50'03"N 56°28'27"E), 890 m, 19.4.2006, leg. Serri and Frisch KU754193 KU754194
Stenus callidus 034 Kerman: Baft, 6 km N Rabor (29°20'28"N 56°50'47"E), 2640 m, 4.5.2007, leg. Serri and Frisch KU754195
Stenus callidus 084 Khuzestan: Baghmalek, Chamkureh (31°31'42"N 49°51'55"E), 670 m, 27-28.4.2009, leg Serri KU754231
Stenus callidus 079–082, 085, 086 Kordestan:11 km E Sanandaj (35°20'11"N 47°09'07"E), 2100 m, 5.9.2008, leg. Serri and Frisch KU754224 KU754225 KU754226 KU754227 KU754230 KU754231
Stenus callidus 087 Kordestan: 7 km S Ghorveh, Veihaj (35°06'34"N 47°45'54"E), 2060 m, 5.9.2008, leg. Serri and Frisch KU754232
Stenus callidus 098, 099 Kordestan: Saghez - Baneh, 27 km SW Saghez (36°08'12"N 46°02'42"E), 1600 m, 3.9.2008, leg. Serri and Frisch KU754237 KU754238
Stenus callidus 035, 036 Tehran: Firouzkuh road, Delichai (35°40'58"N 52°28'26"E), 2000 m, 21.5.2006, leg. Serri and Frisch KU754196 KU754197
Stenus callidus 105–108 Tehran: Firouzkuh, Badroud (35°48'15"N 52°39'21"E), 2060 m, 5.8.2009, leg. Serri and Nasserzadeh KU754241 KU754242 KU754243 KU754244
Stenus callidus 100 West Azarbaijan: 11 km E Takht-e Soleiman (36°36'43"N 47°18'48"E), 2280 m, 7.-8.9.2008, leg. Serri and Frisch KU754239
Stenus callidus 083 West Azarbaijan: 2 km E Takht-e Soleiman N (36°38'05"N 47°14'07"E), 2270 m, 7.-8.9.2008, leg. Serri and Frisch KU754228
Stenus callidus 037 Zanjan: Abbar - Gilvan (36°52'50"N 48°58'32"E), 430 m, 12.7.2006, leg. Serri KU754198
Stenus cautus 146 Esfahan: S Abyaneh, Bidhand (33°29'44"N 51°45'39"E), 2350 m, 18.5.2009, leg. Serri KU754267
Stenus erythrocnemus 059, 060, 062 Ardabil: N Mt Sabalan, Gheynarjeh (38°17'18"N 47°41'22"E), 2100 m, 24.6.2008, leg. Serri KU754213 KU754214 KU754215
Stenus erythrocnemus 024 East Azarbaijan: Zijenab (Mt Sahand) (37°52'08"N 46°18'46"E), 2150 m, 8.8.2005, leg. Serri and Frisch KU754192
Stenus erythrocnemus 134 Esfahan: Natanz, Taragh, Keshe, S Mt. Karkas (33°24'39.3"N 51°46'13.9"E), 2580 m, 17.5.2009, leg. Serri KU754262
Stenus erythrocnemus 070 Gilan: E Masuleh (37°09'48"N 49°00'19"E), 820 m, 8.6.2008, leg. Serri, Nasserzadeh and Pütz KU754219
Stenus erythrocnemus 009 Kerman: Mahan road, 3 km S pass (30°11'29"N 57°25'42"E), 2430 m, 30.4.2007, leg. Serri and Frisch KU754189
Stenus erythrocnemus 051–054 Tehran: Dizin (36°01'53"N 51°28'52"E), 2810 m, 10.6.2008, leg. Serri, Nasserzadeh and Pütz KU754205 KU754206 KU754207 KU754208
Stenus erythrocnemus 047–050 West Azarbaijan: SE Makou, Gharakelisa (39°05'32"N 44°32'40"E), 1860 m, 28.8.2008, leg. Serri and Frisch KU754201 KU754202 KU754203 KU754204
Stenus erythrocnemus 055–058 West Azarbaijan: Orumieh, S Silvaneh, 14 km S Ziveh (37°09'06"N 44°52'55"E), 2320 m, 1.9.2008, leg. Serri and Frisch KU754209 KU754210 KU754211 KU754212
Stenus erythrocnemus 064 West Azarbaijan: 18 km W Khoy, Ghotour road (38°28'45"N 44°47'08"E), 1320 m, 29.8.2008, leg. Serri and Frisch KU754216
Stenus erythrocnemus 068, 069 West Azarbaijan: Siahcheshmeh - Khoy, Kordkandy (N 38°55'02" E44°27'40’’), 1870 m, 28.8.2008, leg. Serri and Frisch KU754217 KU754218
Stenus erythrocnemus 071–074 West Azarbaijan: Siahcheshmeh - Khoy, W Zarabad (N 38°44'16" E44°28'10’’), 2400 m, 30.8.2008, leg. Serri and Frisch KU754220 KU754221 KU754222 KU754223
Stenus erythrocnemus 011, 012 Yazd: Taft, Dehbala (31°35'37"N 54°07'20"E), 2550 m, 15.5.2007, leg. Serri and Frisch KU754190 KU754191
Stenus fuscicornis 156 Mazandaran: Ramsar, Javaherdeh road, Eshkatechal (36°50'32"N 50°34'39"E), 1450 m, 6.6.2008, leg. Serri, Nasserzadeh and Pütz KU754272
Stenus ganglbaueri 153 Mazandaran: Baladeh, Nesen, E pass (36°14'37"N 51°27'17"E), 2960 m, 1.6.2008, leg. Serri, Nasserzadeh and Pütz KU754271
Stenus hypoproditor 137 Kordestan: N Divandarreh, SW Zarrineh, 5 km NW Ebrahimabad (35°59'10"N 46°52'11"E), 1960 m, 4.9.2008, leg. Serri and Frisch KU754265
Stenus intricatus zoufali 135 East Azarbaijan: Tabriz - Marand, 9 km N Amand (38°17'18"N 46°08'46"E), 1520 m, 26.8.2008, leg. Serri and Frisch KU754263
Stenus maculiger 133 West Azarbaijan: W Salmas, 10 km W Kuzerash (38°11'40"N 44°33'04"E), 1960 m, 31.8.2008, leg. Serri and Frisch KU754261
Stenus martensi 166 Mazandaran: Kelardasht- Marzanabad road, (36°35'39"N 51°08'37"E), 1000 m, 3.6.2008, leg. Serri, Nasserzadeh and Pütz KU754279
Stenus medus 161 Mazandaran: Rineh, S Mt Damavand (35°53'56"N 52°06'29"E), 2960 m, 3.8.2009, leg Serri and Nasserzadeh KU754276
Stenus mongolicus 138 Semnan: Shahroud, NE Mojem, Tash (36°31’N 54°42’E), 10.8.2009, leg. Serri and Nasserzadeh KU754266
Stenus ochropus 159 Fars: SE Sepidan, Dalkhon (30°14'40"N 52°06'09"E), 2090 m, 9.5.2007, leg. Serri and Frisch KU754275
Stenus persicus 163 Kordestan: Saghez - Baneh, 27 km SW Saghez (36°08'12"N 46°02'42"E), 1600 m, 3.9.2008, leg. Serri and Frisch KU754277
Stenus pieperi 157 Mazandaran: S Salmanshahr (36°38'49"N 51°10'27"E), 280 m, 4.6.2008, leg. Serri, Nasserzadeh and Pütz KU754273
Stenus ressli 158 Mazandaran: Tonekabon, Sehezar Forest (36°32'36"N 50°49'53"E), 1090 m, 5.6.2008, leg. Serri, Nasserzadeh and Pütz KU754274
Stenus schah 164 Kohgiluye & Boyerahmad: N Yasuj, Sepidar, Dilgan River (30°45'03"N 51°08'07"E), 2270 m, 18.6.2009, leg. Serri KU754278
Stenus turk 124 Esfahan: S Abyaneh, Bidhand (33°29'44"N 51°45'39"E), 2350 m, 18.5.2009, leg. Serri KU754255
Stenus turk 126–129 Golestan: NE Kalaleh, Zav, Totlitamak village (37°29'36"N 55°46'25"E), 1240 m, , 16.10.2009, leg. Serri KU754257 KU754258 KU754259 KU754260
Stenus viti 148 Mazandaran: Kelardasht - Marzanabad (36°35'40"N 51°08'37"E), 1000 m, 3.6.2008, leg. Serri, Nasserzadeh and Pütz KU754269
Figure 8.

Maximum likelihood phylogram. Numbers on branches are bootstrap values (>50). The specimen codes correspond to the geographical information in Table 1. Scale shows number of substitutions per site.

Figure 9.

Distribution map of sequenced specimens of (●) and (○). Numbers are haplotype numbers (see Table 4). Sites with more than one haplotype number indicate several geographically close localities.

Maximum Parsimony Nearest-Neighbor-Interchange neighbor-joining The specimens used in this study with their location data and the GenBank association number of submitted sequences of COI. The specimen number codes the geographical origin of the specimens in the phylogenetic tree (Figures 7, 8). The haplotype networks for COI of and (Figures 3, 4) comprise fourteen and four haplotypes, respectively. Haplotype diversity (h) was estimated at 0.911±0.034 for and 0.267±0.107 for . The nucleotide diversity (π i) of each species was calculated as 0.01348±0.00074 for and 0.00045±0.00019 PageBreakPageBreakPageBreakfor (Table 4). In , no haplotype has an outstandingly high frequency, while has a dominant haplotype (Hap_1) found in populations of the Elburz and Zagros Mountains and the central mountain ranges.
Table 4.

Summary of genetic diversity indices in the mitochondrial COI gene segment of and .

SpeciesNLkHh (±standard deviation)π (±standard deviation)Haplotype no.: sequence(s) no.
Stenus callidus 2965830140.911±0.0340.01348±0.00074Hap_1: 031, 033, 037, 085, 086 Hap_2: 034, 081 Hap_3: 035, 036 Hap_4: 045, 046 Hap_5: 079, 082 Hap_6: 080, 083, 084, 089, 090,100, 103 Hap_7: 087 Hap_8: 092 Hap_9: 094 Hap_10: 098,106 Hap_11: 099 Hap_12: 105 Hap_13: 107 Hap_14: 108
Stenus erythrocnemus 28658340.267±0.1070.00045±0.00019Hap_1: 009, 011, 012, 047, 048, 050, 051, 052, 053, 054, 055, 056, 057, 058, 059, 064, 068, 069, 070, 071, 072, 073, 074, 134 Hap_2: 024 Hap_3: 049, 062 Hap_4: 060

Abbreviations: N; L; k; H; h; π.

, number of sequences

, sequence length (number of bases)

, number of variable sites

, number of haplotypes

, haplotype diversity

, nucleotide diversity

The maximum genetic distance among populations does not exceed 0.003% in and is much higher in with 0.028% (Tables 2, 3). The highest genetic distance as well as the highest haplotype diversity in the populations of was observed in the central zone of the Zagros Mountains. In , the highest genetic distance is among the populations of northwestern Iran.
Table 2.

Kimura two-parameter pairwise genetic distances between populations of .

031033034035036037045046079080081082083084085086087089090092094098099100103105106107108
031
0330.000
0340.0060.006
0350.0220.0220.022
0360.0220.0220.0220.000
0370.0000.0000.0060.0220.022
0450.0020.0020.0080.0230.0230.002
0460.0020.0020.0080.0230.0230.0020.000
0790.0120.0120.0110.0280.0280.0120.0140.014
0800.0200.0200.0200.0020.0020.0200.0220.0220.026
0810.0060.0060.0000.0220.0220.0060.0080.0080.0110.020
0820.0120.0120.0110.0280.0280.0120.0140.0140.0000.0260.011
0830.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.026
0840.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.0260.000
0850.0000.0000.0060.0220.0220.0000.0020.0020.0120.0200.0060.0120.0200.020
0860.0000.0000.0060.0220.0220.0000.0020.0020.0120.0200.0060.0120.0200.0200.000
0870.0030.0030.0090.0220.0220.0030.0050.0050.0150.0200.0090.0150.0200.0200.0030.003
0890.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.0260.0000.0000.0200.0200.020
0900.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.0260.0000.0000.0200.0200.0200.000
0920.0230.0230.0230.0050.0050.0230.0250.0250.0300.0030.0230.0300.0030.0030.0230.0230.0230.0030.003
0940.0080.0080.0020.0230.0230.0080.0090.0090.0120.0220.0020.0120.0220.0220.0080.0080.0110.0220.0220.022
0980.0110.0110.0080.0200.0200.0110.0120.0120.0140.0190.0080.0140.0190.0190.0110.0110.0140.0190.0190.0220.009
0990.0030.0030.0090.0220.0220.0030.0020.0020.0150.0200.0090.0150.0200.0200.0030.0030.0030.0200.0200.0230.0110.014
1000.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.0260.0000.0000.0200.0200.0200.0000.0000.0030.0220.0190.020
1030.0200.0200.0200.0020.0020.0200.0220.0220.0260.0000.0200.0260.0000.0000.0200.0200.0200.0000.0000.0030.0220.0190.0200.000
1050.0140.0140.0110.0200.0200.0140.0150.0150.0170.0190.0110.0170.0190.0190.0140.0140.0140.0190.0190.0220.0120.0120.0140.0190.019
1060.0110.0110.0080.0200.0200.0110.0120.0120.0140.0190.0080.0140.0190.0190.0110.0110.0140.0190.0190.0220.0090.0000.0140.0190.0190.012
1070.0110.0110.0080.0170.0170.0110.0120.0120.0140.0150.0080.0140.0150.0150.0110.0110.0110.0150.0150.0190.0090.0090.0110.0150.0150.0030.009
1080.0120.0120.0090.0220.0220.0120.0140.0140.0150.0200.0090.0150.0200.0200.0120.0120.0150.0200.0200.0230.0110.0020.0150.0200.0200.0140.0020.011
Table 3.

Kimura two-parameter pairwise genetic distances between populations of .

009011012024047048049050051052053054055056057058059060062064068069070071072073074134
009
0110.000
0120.0000.000
0240.0020.0020.002
0470.0000.0000.0000.002
0480.0000.0000.0000.0020.000
0490.0020.0020.0020.0030.0020.002
0500.0000.0000.0000.0020.0000.0000.002
0510.0000.0000.0000.0020.0000.0000.0020.000
0520.0000.0000.0000.0020.0000.0000.0020.0000.000
0530.0000.0000.0000.0020.0000.0000.0020.0000.0000.000
0540.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.000
0550.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.000
0560.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.000
0570.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.000
0580.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.000
0590.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.000
0600.0020.0020.0020.0030.0020.0020.0030.0020.0020.0020.0020.0020.0020.0020.0020.0020.002
0620.0020.0020.0020.0030.0020.0020.0000.0020.0020.0020.0020.0020.0020.0020.0020.0020.0020.003
0640.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.002
0680.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.000
0690.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.000
0700.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.000
0710.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.0000.000
0720.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.0000.0000.000
0730.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.0000.0000.0000.000
0740.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.0000.0000.0000.0000.000
1340.0000.0000.0000.0020.0000.0000.0020.0000.0000.0000.0000.0000.0000.0000.0000.0000.0000.0020.0020.0000.0000.0000.0000.0000.0000.0000.000
Regarding the subgeneric concept of , our results (Figures 7, 8) do not support the traditional grouping except for , the selected species of which appear in the same clade. Our results rather support the monophyly of those species groups of Puthz (2008: 139–148), which we tested with at least two representatives. These species groups and the included species are: group with and , group with and , group with , and , group with , , and , group with , and . Kimura two-parameter pairwise genetic distances between populations of . Kimura two-parameter pairwise genetic distances between populations of . Summary of genetic diversity indices in the mitochondrial COI gene segment of and . Abbreviations: N; L; k; H; h; π. , number of sequences , sequence length (number of bases) , number of variable sites , number of haplotypes , haplotype diversity , nucleotide diversity

Discussion

With the example of Iranian populations of the open-living and the stratobiont , we demonstrate that different ecomorphological forms of congeneric species with differing dispersal ability and degree of geneflow can show a different degree of infraspecific genetic variability. The open-living is the most widespread in Iran. It was found in most of the country in high abundance at elevations between 250 m and 2800 m a.s. l. (Figure 5, after Serri and Frisch 2016: 27). As an example of the open-living ecomorphological form described by Kastcheev and Puthz (2011: 454), this mobile species does not show geographically structured populations. The low level of haplotype diversity as well as the low intraspecific distance of this species indicate a high level of gene flow between the populations of this species, which are connected to each other even across zoogeographic barriers due to the species’ dispersal ability. This gene flow within the Iranian meta-population of is probably supported by the wide ecological adaptability, which prevents geographic isolation. Unlike the remainder of Iranian , we repeatedly collected not only PageBreakin natural habitats, but also in polluted sites and anthropogenic places such as watering channels of farms far from natural, permanent watercourses.
Figure 5.

Distribution of in Iran (after Serri and Frisch 2016: 28).

Distribution of in Iran (after Serri and Frisch 2016: 28). The stratobiont , the second widespread in Iran, was collected in high abundance in most of the collecting sites all over the country (Figure 6, after Serri and Frisch 2016: 27). Our cladogram shows the separation of the tested populations into six genetic units, which can be explained by the limited dispersal ability of the mostly micropterous individuals of . The genetic variability of , as shown by the higher genetic distance among populations and more diverse haplotypes, might moreover be increased by discontinuity of suitable habitats caused by man-made destruction, because – in contrast to – the species usually avoids strongly disturbed sites.
Figure 6.

Distribution of in Iran (after Serri and Frisch 2016: 28).

Distribution of in Iran (after Serri and Frisch 2016: 28). Strict consensus of most-parsimonious trees. Values above the branches indicate clade bootstrap support (>50) using 1000 replicates. The geographical origin of the specimens is coded by numbers behind the species name which correspond to the geographical information in Table 1. Maximum likelihood phylogram. Numbers on branches are bootstrap values (>50). The specimen codes correspond to the geographical information in Table 1. Scale shows number of substitutions per site. Distribution map of sequenced specimens of (●) and (○). Numbers are haplotype numbers (see Table 4). Sites with more than one haplotype number indicate several geographically close localities. Though our COI examination of a limited number of West Palaearctic species of is not extensive when it comes to understanding the supraspecific phylogeny of the entire clade, it clearly shows the monophyly of the included species and the polyphyletic relationship among the investigated members of subgenus . The relationships of and with other species were not resolved, because we were able to extract DNA from only one species of each of these subgenera. The monophyly of the selected species is, however, consistent with the result of the analysis performed by Koerner et al. (2013: 340). Our results, which agree with those of Koerner et al. (2013: 345) and Lang et al. (2015: 20–21), further support the monophyly of the tested infrageneric species groups proposed by Puthz (2008: 139–148). On one hand, this result is not very significant, as only few species of some of these groupings were included in this study. On the other hand, our results clearly contradict the traditional subgeneric concept, which is followed until today, and proves the morphological characters this erroneous concept is based on to be phylogenetically uninformative convergencies. The included members of one of these traditional subgenera, , constitute, however, one well supported clade (bootstrap value >90) comprising the group, the group and the group. Particularly the first two species groups are closely related sister groups (bootstrap value 100). Further investigations are necessary to show whether – unlike the other traditional subgenera - actually represents a monophyletic group or not. Our results support the supraspecific phylogenetic concept of Puthz (2008: 139–148) and at the same time largely contradict the traditional subgenera. Therefore, these subgenera should not be used anymore in favour of the informal species groups, though the monophyly of some of them still has to be proved. Among the collected specimens of , there are specimens which show differences in the structure of the median lobe of the aedeagus and in the spermatheca. The cladogram shows that these specimens form a separate clade although they have no geographic separation. Both morphological and genetic examination of a broader basis of specimens is necessary to clarify whether this form should be considered as a distinct species. Since we did not succeed in extracting DNA from a large number of the recently collected species or from the Iranian material in Scheerpeltz solution collected by Senglet, it was not possible to include all Iranian species into the analysis. Moreover, the paucity of fresh specimens of many rare species did not allow us to use genetic data of these species in our phylogenetic analysis. Nevertheless, this preliminary study provides benchmark data for future phylogenetic investigations that include a higher number of taxa at a wider geographic scale and additional genes. Our current analysis based on a COI fragment suggests that the ‘barcoding fragment’ studied here can also be used for testing the phylogenetic validity of supraspecific groups.
  9 in total

1.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

2.  Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species.

Authors:  Paul D N Hebert; Sujeevan Ratnasingham; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-08-07       Impact factor: 5.349

Review 3.  DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics.

Authors:  Mehrdad Hajibabaei; Gregory A C Singer; Paul D N Hebert; Donal A Hickey
Journal:  Trends Genet       Date:  2007-02-20       Impact factor: 11.639

4.  DnaSP v5: a software for comprehensive analysis of DNA polymorphism data.

Authors:  P Librado; J Rozas
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

5.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Extraction of high molecular weight DNA from molluscs.

Authors:  B Winnepenninckx; T Backeljau; R De Wachter
Journal:  Trends Genet       Date:  1993-12       Impact factor: 11.639

8.  DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

Authors:  O Folmer; M Black; W Hoeh; R Lutz; R Vrijenhoek
Journal:  Mol Mar Biol Biotechnol       Date:  1994-10

9.  Performance and adaptive value of tarsal morphology in rove beetles of the genus Stenus (Coleoptera, Staphylinidae).

Authors:  Oliver Betz
Journal:  J Exp Biol       Date:  2002-04       Impact factor: 3.312

  9 in total
  1 in total

1.  Cretaceous origin of the unique prey-capture apparatus in mega-diverse genus: stem lineage of Steninae rove beetles discovered in Burmese amber.

Authors:  Dagmara Żyła; Shûhei Yamamoto; Karin Wolf-Schwenninger; Alexey Solodovnikov
Journal:  Sci Rep       Date:  2017-04-11       Impact factor: 4.379

  1 in total

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