| Literature DB >> 27825390 |
Shanli Zhu1, Sai Wang1, Yu Lin1, Pengyue Jiang1, Xiaobin Cui1, Xinye Wang1, Yuanbin Zhang1, Weiqing Pan2,3.
Abstract
BACKGROUND: Schistosoma japonicum is a parasitic flatworm that causes human schistosomiasis. Secreted extracellular vesicles (EVs) play a key role in pathogen-host interfaces. Previous studies have shown that S. japonicum adult worms can release microRNA (miRNA)-containing EVs, which can transfer their cargo to mammalian cells and regulate gene expression in recipient cells. Tissue-trapped eggs are generally considered the major contributor to the severe pathology of schistosomiasis; however, the interactions between the host and parasite in this critical stage remain largely unknown.Entities:
Keywords: Eggs; Extracellular vesicles; Schistosoma japonicum; Small non-coding RNAs; miRNAs
Mesh:
Substances:
Year: 2016 PMID: 27825390 PMCID: PMC5101684 DOI: 10.1186/s13071-016-1845-2
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Sequences of primers used for qRT-PCR
| Gene | Name | Sequence (5′–3′) |
|---|---|---|
| sja-miR-71b | RT stem-loop primer | CTCAACTGGTGTCGTGGAGTCGGCAATTCAGTTGAGCGTCTCA |
| Forward primer | ACACTCCAGCTGGGTGAAAGACTTGAGT | |
| sja-bantam | RT stem-loop primer | CTCAACTGGTGTCGTGGAGTCGGCAATTCAGTTGAGACCAGCT |
| Forward primer | ACACTCCAGCTGGGTGAGATCGCGATTA | |
| cel-miR-39 | RT stem-loop primer | CTCAACTGGTGTCGTGGAGTCGGCAATTCAGTTGAGCAAGCTG |
| Forward primer | ACACTCCAGCTGGGTGTCACCGGGTGTAAAT | |
| Common reverse primer | CTGGTGTCGTGGAGTCGGCAA | |
| mmu-U6 | Forward primer | GCTTCGGCAGCACATATACTAAAAT |
| Reverse primer | CGCTTCACGAATTTGCGTGTCAT |
Fig. 1Characterization of extracellular vesicles (EVs) obtained from the eggs of S. japonicum by transmission electron microscopy (TEM). EVs were isolated from in vitro culture supernatants of S. japonicum eggs and analyzed by TEM at 200,000× magnification. Scale-bar: 100 nm
Fig. 2Identification of small RNAs associated with S. japonicum egg extracellular vesicles (EVs). a Summary of the output of the Solexa data; the percentage in parentheses indicates the percentage of high-quality reads. b The length distribution of small RNA tags. c Classification of the small RNAs by comparison with the S. japonicum genome. d qRT-PCR validation of the abundance of Sja-bantam and Sja-miR-71b in the RNA isolated from S. japonicum egg EVs. Values are normalized to culture medium, based on equal volumes of starting material. Abbreviations: CM, culture medium; EVs, extracellular vesicles; Residuum, supernatant medium from the final step of EV extraction
List of identified miRNAs associated with S. japonicum egg EVs
| Small RNA ID | Location | Sequence | Readsa | miRNA | |||
|---|---|---|---|---|---|---|---|
| t0000052 | SJC_S000027 | 600247 | 600269 | – | CCACCGGGTAGACATTCATTCGC | 29608 | sja-miR-36-3p |
| t0000207 | SJC_S000052 | 314799 | 314820 | + | AACCCTGTAGACCCGAGTTTGG | 6156 | sja-miR-10-3p |
| t0000525 | SJC_S000254 | 288019 | 288040 | + | TGAGATCGCGATTAAAGCTGGT | 2307 | sja-bantam |
| t0000729 | SJC_S000054 | 245452 | 245472 | – | TCACAGCCAGTATTGATGAAC | 1332 | sja-miR-2a-3p |
| t0000925 | SJC_S000054 | 245576 | 245597 | – | TGAAAGACGATGGTAGTGAGAT | 1085 | sja-miR-71a |
| t0001363 | SJC_S000055 | 384663 | 384684 | – | TATTGCACTTACCTTCGCCTTG | 1070 | sja-miR-3479-3p |
| t0001942 | SJC_S000471 | 22294 | 22314 | – | TATTATGCAACGTTTCACTCT | 1038 | sja-miR-2162-3p |
| t0001985 | SJC_S000102 | 364277 | 364299 | + | AAAGACTTGAGTAGTGAGACGCT | 746 | sja-miR-71b-3p |
| t0002533 | SJC_S000054 | 245393 | 245413 | – | CGTCTCAAAGGACTGTGAGCC | 585 | sja-miR-2b-3p |
| t0002630 | SJC_S000664 | 24730 | 24752 | + | TGACTAGAAAGTGCACTCACTTC | 570 | sja-miR-61 |
| t0003175 | SJC_S000001 | 925810 | 925830 | – | TAAATGCATTTTCTGGCCCGT | 554 | sja-miR-277 |
| t0003502 | SJC_S004031 | 7481 | 7503 | + | TCACAACCTACTTGATTGAGGGG | 238 | sja-miR-307 |
| t0005635 | SJC_S000102 | 364554 | 364577 | + | TATCACAGTCCTGCTTAGGTGACG | 139 | sja-miR-2d-3p |
| t0007134 | SJC_S000110 | 287436 | 287456 | – | GGCCTCGTGGTGTAGCGGTTATC | 105 | novel-miR-7 |
aOnly miRNAs with > 100 reads are listed
Fig. 3Schistosoma japonicum egg extracellular vesicles (EVs) and RNAs were internalized by murine liver cells. a Uptake analysis of S. japonicum egg EVs by mouse liver cells detected by confocal microscopy. PKH67-labeled S. japonicum egg EVs, Hepa1-6 EVs, and PHK67-PBS were incubated with Hepa1-6 cells for 1 h. Nuclei were stained with DAPI (blue). Scale-bars: 20 μm. b Relative level of parasite-derived miRNAs (i.e. bantam and miR-71b) in murine liver cells 20 h post-incubation with 10 μg S. japonicum egg EVs following PBS washing. The data were normalized to the level of miRNAs in 10 μg of EVs. *P ≤ 0.05
Fig. 4qRT-PCR analysis of the Sja-miR-71b and Sja-bantam level in primary hepatocytes of infected mice. a qRT-PCR analysis of two of the miRNAs that are associated with S. japonicum egg EVs (i.e. Sja-miR-71b and Sja-bantam) in primary hepatocytes of infected mice at 49 dpi and 80 dpi. b, c The PCR products of Sja-miR-71b (68 bp) and Sja-bantam (67 bp). Lanes 1 and 3: primary hepatocytes of uninfected mice at days 49 and 80; Lanes 2 and 4: primary hepatocytes of infected mice at 49 dpi and 80 dpi; Lane 5: S. japonicum egg EVs; Lane 6: S. japonicum eggs