Literature DB >> 27814969

Cross-Family Transcription Factor Interactions: An Additional Layer of Gene Regulation.

Marian Bemer1, Aalt D J van Dijk2, Richard G H Immink1, Gerco C Angenent3.   

Abstract

Specific and dynamic gene expression strongly depends on transcription factor (TF) activity and most plant TFs function in a combinatorial fashion. They can bind to DNA and control the expression of the corresponding gene in an additive fashion or cooperate by physical interactions, forming larger protein complexes. The importance of protein-protein interactions between members of a particular plant TF family has long been recognised; however, a significant number of interfamily TF interactions has recently been reported. The biological implications and the molecular mechanisms involved in cross-family interactions have now started to be elucidated and the examples illustrate potential roles in the bridging of biological processes. Hence, cross-family TF interactions expand the molecular toolbox for plants with additional mechanisms to control and fine-tune robust gene expression patterns and to adapt to their continuously changing environment.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Keywords:  DNA binding; TF families; protein interactions; transcription factor; transcription regulation

Mesh:

Substances:

Year:  2016        PMID: 27814969     DOI: 10.1016/j.tplants.2016.10.007

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  31 in total

1.  Differences in DNA Binding Specificity of Floral Homeotic Protein Complexes Predict Organ-Specific Target Genes.

Authors:  Cezary Smaczniak; Jose M Muiño; Dijun Chen; Gerco C Angenent; Kerstin Kaufmann
Journal:  Plant Cell       Date:  2017-07-21       Impact factor: 11.277

2.  TEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR4 Interacts with WRINKLED1 to Mediate Seed Oil Biosynthesis.

Authors:  Que Kong; Sanjay K Singh; Jenny J Mantyla; Sitakanta Pattanaik; Liang Guo; Ling Yuan; Christoph Benning; Wei Ma
Journal:  Plant Physiol       Date:  2020-07-06       Impact factor: 8.340

3.  TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information.

Authors:  Shubhada R Kulkarni; Dries Vaneechoutte; Jan Van de Velde; Klaas Vandepoele
Journal:  Nucleic Acids Res       Date:  2018-04-06       Impact factor: 16.971

4.  The function of the WRI1-TCP4 regulatory module in lipid biosynthesis.

Authors:  Que Kong; Yuzhou Yang; Pui Man Low; Liang Guo; Ling Yuan; Wei Ma
Journal:  Plant Signal Behav       Date:  2020-09-03

5.  IDDomainSpotter: Compositional bias reveals domains in long disordered protein regions-Insights from transcription factors.

Authors:  Peter S Millard; Katrine Bugge; Riccardo Marabini; Wouter Boomsma; Meike Burow; Birthe B Kragelund
Journal:  Protein Sci       Date:  2019-11-11       Impact factor: 6.725

6.  Combinatorial interactions of the LEC1 transcription factor specify diverse developmental programs during soybean seed development.

Authors:  Leonardo Jo; Julie M Pelletier; Ssu-Wei Hsu; Russell Baden; Robert B Goldberg; John J Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-31       Impact factor: 11.205

7.  Putative cis-Regulatory Elements Predict Iron Deficiency Responses in Arabidopsis Roots.

Authors:  Birte Schwarz; Christina B Azodi; Shin-Han Shiu; Petra Bauer
Journal:  Plant Physiol       Date:  2020-01-14       Impact factor: 8.340

8.  CmCYC2-like transcription factors may interact with each other or bind to the promoter to regulate floral symmetry development in Chrysanthemum morifolium.

Authors:  Cunquan Yuan; Di Huang; Yi Yang; Ming Sun; Tangren Cheng; Jia Wang; Huitang Pan; Qixiang Zhang
Journal:  Plant Mol Biol       Date:  2020-02-22       Impact factor: 4.076

9.  Determinants of correlated expression of transcription factors and their target genes.

Authors:  Adam B Zaborowski; Dirk Walther
Journal:  Nucleic Acids Res       Date:  2020-11-18       Impact factor: 16.971

10.  Transcription factor VqERF114 regulates stilbene synthesis in Chinese wild Vitis quinquangularis by interacting with VqMYB35.

Authors:  Lan Wang; Yuejin Wang
Journal:  Plant Cell Rep       Date:  2019-08-14       Impact factor: 4.570

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