| Literature DB >> 27812144 |
Baoli Heng1, Hongwen Ding1, Haolin Ren1, Liping Shi1, Jie Chen1, Xun Wu1, Caiyong Lai1, Ganshen Yu1, Yin Xu1, Zexuan Su1.
Abstract
BACKGROUND: The value of Fas ligand (FASL) as a diagnostic immune marker for acute renal rejection is controversial; this meta-analysis aimed to clarify the role of FASL in acute renal rejection.Entities:
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Year: 2016 PMID: 27812144 PMCID: PMC5094747 DOI: 10.1371/journal.pone.0165628
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Study search flow for meta-analysis.
Basic information extracted from the eligible studies.
| Authors | Publication Year | Country | Sample | Method | Fluorescence Staining | Housekeeping Gene | Sample Collecting Time Post Tx | Number of Subjects | TP | FP | FN | TN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Strehlau et al.[ | 1997 | US | graft biopsy | competitive RT-PCR | EB | GAPDH | day 4 and 11 | 40 | 10 | 2 | 2 | 26 |
| Lipman et al.[ | 1998 | US | graft biopsy | competitive RT-PCR | EB | GAPDH | 1, 2, 3, and 6 months | 21 | 2 | 0 | 9 | 10 |
| Vasconcellos et al.[ | 1998 | US | PBLs | competitive RT-PCR | EB | GAPDH | NA | 31 | 11 | 5 | 0 | 15 |
| Vasconcellos et al.[ | 1998 | US | graft biopsy | competitive RT-PCR | EB | GAPDH | NA | 31 | 9 | 4 | 2 | 16 |
| Sharma et al.[ | 1998 | US | graft biopsy | RT-PCR | EB | β-actin | NA | 80 | 11 | 1 | 42 | 26 |
| Dugre et al.[ | 2000 | Canada | PBL | RT-PCR | EB | β-actin | 3 months | 21 | 2 | 1 | 6 | 12 |
| Netto et al.[ | 2002 | Brazil | PBL | RT-PCR | EB | β-actin | day 10 | 29 | 7 | 0 | 0 | 22 |
| Netto et al.[ | 2002 | Brazil | graft biopsy | RT-PCR | EB | β-actin | day 10 | 29 | 7 | 0 | 0 | 22 |
| Dias et al.[ | 2004 | Brazil | graft biopsy | RT-PCR | EB | GAPDH | 2 months | 21 | 8 | 1 | 3 | 9 |
| Desvaux et al.[ | 2004 | France | graft biopsy | Real-Time Quantitative RT-PCR | FHP | GAPDH | 24biopsies:6–90 days; 10biopsies:5months-8years | 41 | 23 | 0 | 9 | 9 |
| Shin et al.[ | 2005 | Korea | PBL | competitive RT-PCR | EB | β-actin | days 2, 4, 6, 8, 10, 12 | 15 | 1 | 0 | 6 | 8 |
| Graziotto et al.[ | 2006 | Italy | graft biopsy | Real-Time Quantitative RT-PCR | SYBR | GAPDH | diagnostic biopsy: 5–10days; protocol biopsy: 2 months | 17 | 8 | 1 | 3 | 5 |
| Galante et al.[ | 2006 | Brazil | urine | Real-Time Quantitative RT-PCR | SYBR | cyclophilin | 499 ± 629.6days | 24 | 12 | 0 | 1 | 11 |
| Dias et al.[ | 2008 | Brazil | PBL | RT-PCR | FHP(TaqMan) | β-actin | 7 to 55 days | 48 | 18 | 2 | 2 | 26 |
| Dias et al.[ | 2008 | Brazil | urine | RT-PCR | FHP(TaqMan) | cyclophilin | 7 to 55 days | 48 | 20 | 10 | 0 | 18 |
FN, false negative; FP, false positive; PBL, peripheral blood; PCR, polymerase chain reaction; TN, true negative; TP, true positive; EB, ethidium bromide; FHP, fluorescence hybridization probes; Tx, renal transplant; NA, not available.
Fig 2Diagnostic performance of FasL for AR.
Forest plots of overall sensitivity(A), specificity(B), positive likelihood ratio (LR)(C), negative LR(D), diagnostic odds ratio (OR) (E), and SROC curve (F).
Fig 3The Fagan's nomograms and post-test probability of FasL detection for developing AR.
Fig 4SROC plot of FasL test for AR diagnosis in subgroups analyses.
(A), the year of publication; (B), sample; (C), area; (D), PCR technique; (E), housekeeping gene; (F), fluorescence staining; (G), clinical classification of AR.
Diagnostic accuracy of FasL for AR after kidney transplantation.
| Subgroups | No. of independent data sets | Independent estimates (95% CI) | Likelihood ratio (95% CI) | DOR (95% CI) | AUC (SE) | ||
|---|---|---|---|---|---|---|---|
| SEN | SPE | PLR | NLR | ||||
| Before 2000 | 6 | 0.43(0.33–0.52) | 0.89(0.82–0.94) | 4.51(2.76–7.35) | 0.52(0.29–0.96) | 16.06(6.18–41.74) | 0.9149 (0.0354) |
| After 2000 | 9 | 0.81(0.73–0.88) | 0.90(0.84–0.95) | 8.70(3.34–22.64) | 0.19(0.07–0.53) | 56.44(21.50–148.13) | 0.9526 (0.0185) |
| PBL | 5 | 0.74(0.60–0.85) | 0.91(0.83–0.96) | 6.27(2.48–15.86) | 0.27(0.07–1.08) | 34.71(5.64–213.66) | 0.9561 (0.0237) |
| Urine | 2 | 0.97(0.84–1.00) | 0.74(0.58–0.87) | 5.71(2.02–5.44) | 0.09(0.02–0.33) | 110.64(12.50–979.34) | SROC-Unavailable |
| Graft biopsy | 8 | 0.53(0.44–0.61) | 0.93(0.88–0.97) | 6.41(3.58–11.49) | 0.37(0.19–0.71) | 22.42(9.44–53.23) | 0.9264 (0.0315) |
| North America | 6 | 0.43(0.33–0.52) | 0.89(0.82–0.94) | 4.51(2.76–7.35) | 0.52(0.29–0.96) | 16.06(6.18–41.74) | 0.9149 (0.0354) |
| Europe | 2 | 0.72(0.56–0.85) | 0.93(0.68–1.00) | 6.31(1.39–28.69) | 0.31(0.19–0.50) | 22.75(3.35–154.47) | SROC-Unavailable |
| Brazil | 6 | 0.92(0.84–0.97) | 0.89(0.82–0.94) | 11.21(3.00–41.94) | 0.14(0.07–0.28) | 108.44(33.88–347.13) | 0.9648 (0.0158) |
| RT-PCR | 7 | 0.58(0.49–0.67) | 0.90(0.84–0.94) | 7.57(2.77–20.72) | 0.22(0.06–0.78) | 40.56(10.19–161.41) | 0.9534 (0.0207) |
| Competitive RT-PCR | 5 | 0.63(0.49–0.76) | 0.87(0.78–0.93) | 4.48(2.69–7.47) | 0.38(0.14–1.06) | 22.57(7.43–68.52) | 0.9168 (0.0351) |
| Real-time quantitative RT-PCR | 3 | 0.77(0.64–0.87) | 0.96(0.80–1.00) | 8.43(2.25–31.64) | 0.28(0.17–0.45) | 38.93(7.43–204.06) | 0.8874 (0.1543) |
| GAPDH | 7 | 0.72(0.62–0.80) | 0.87(0.79–0.93) | 4.81(2.99–7.73) | 0.30(0.13–0.68) | 26.07(10.30–65.96) | 0.9158 (0.0304) |
| β-actin | 6 | 0.45(0.35–0.55) | 0.97(0.92–0.99) | 10.21(4.35–23.92) | 0.42(0.18–0.99) | 31.79(5.29–191.18) | 0.9845 (0.0121) |
| Cyclophilin | 2 | 0.97(0.84–1) | 0.74(0.58–0.87) | 5.71(0.50–65.85) | 0.09(0.02–0.33) | 110.64(12.50–979.34) | SROC-Unavailable |
| EB | 9 | 0.49(0.41–0.58) | 0.92(0.87–0.96) | 5.21(3.31–8.21) | 0.43(0.24–0.78) | 22.05(8.39–57.94) | 0.9358(0.0251) |
| FHP | 3 | 0.85(0.74–0.92) | 0.82(0.70–0.90) | 6.43(1.33–31.12) | 0.14(0.03–0.68) | 82.92(19.34–355.51) | 0.9575(0.0233) |
| SYBR | 3 | 0.83(0.63–0.95) | 0.94(0.71–1) | 7.22(1.54–33.83) | 0.22(0.07–0.67) | 40.58(3.07–535.85) | SROC-Unavailable |
| clinical AR | 13 | 0.66(0.59–0.72) | 0.89(0.85–0.93) | 5.84(3.43–9.94) | 0.24(0.11–0.52) | 34.85(15.34–79.17) | 0.9400(0.0177) |
| Subclinical AR | 2 | 0.46(0.24–0.68) | 0.95(0.75–1) | 6.35(1.29–31.11) | 0.54(0.15–1.93) | 13.81(1.99–96.00) | SROC-Unavailable |
| 10 | 0.73(0.64–0.81) | 0.90(0.85–0.94) | 6.90(3.24–14.69) | 0.30(0.13–0.67) | 33.62(12.08–93.61) | 0.9486(0.0193) | |
| 15 | 0.64(0.57–0.70) | 0.90(0.85–0.93) | 5.66(3.51–9.11) | 0.30(0.16–0.54) | 30.63(14.67–63.92) | 0.9389(0.0175) | |
AUC, the area under the summary receiver operating characteristics curve; CI, confidence interval; DOR, diagnostic odds ratio; NLR, negative likelihood ratio; PLR, positive likelihood ratio; PBL, peripheral blood; SEN, sensitivity; SPE, specificity; Tx, renal transplantation, EB, ethidium bromide; FHP, fluorescence hybridization probes.
Fig 5SROC plot of FasL, granzyme B and perforin for AR diagnosis.
Fig 6Deeks’ funnel plot for the assessment of potential bias in FasL analysis.