Literature DB >> 27810897

Oxidative Unfolding of the Rubredoxin Domain and the Natively Disordered N-terminal Region Regulate the Catalytic Activity of Mycobacterium tuberculosis Protein Kinase G.

Matthias Wittwer1, Qi Luo2,3, Ville R I Kaila2, Sonja A Dames4,5.   

Abstract

Mycobacterium tuberculosis escapes killing in human macrophages by secreting protein kinase G (PknG). PknG intercepts host signaling to prevent fusion of the phagosome engulfing the mycobacteria with the lysosome and, thus, their degradation. The N-terminal NORS (no regulatory secondary structure) region of PknG (approximately residues 1-75) has been shown to play a role in PknG regulation by (auto)phosphorylation, whereas the following rubredoxin-like metal-binding motif (RD, residues ∼74-147) has been shown to interact tightly with the subsequent catalytic domain (approximately residues 148-420) to mediate its redox regulation. Deletions or mutations in NORS or the redox-sensitive RD significantly decrease PknG survival function. Based on combined NMR spectroscopy, in vitro kinase assay, and molecular dynamics simulation data, we provide novel insights into the regulatory roles of the N-terminal regions. The NORS region is indeed natively disordered and rather dynamic. Consistent with most earlier data, autophosphorylation occurs in our assays only when the NORS region is present and, thus, in the NORS region. Phosphorylation of it results only in local conformational changes and does not induce interactions with the subsequent RD. Although the reduced, metal-bound RD makes tight interactions with the following catalytic domain in the published crystal structures, it can also fold in its absence. Our data further suggest that oxidation-induced unfolding of the RD regulates substrate access to the catalytic domain and, thereby, PknG function under different redox conditions, e.g. when exposed to increased levels of reactive oxidative species in host macrophages.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Mycobacterium tuberculosis; NMR; autophosphorylation; intrinsically disordered protein; metal ion-protein interaction; molecular dynamics; oxidative stress; protein kinase G (PKG); protein phosphorylation; redox regulation

Mesh:

Substances:

Year:  2016        PMID: 27810897      PMCID: PMC5207137          DOI: 10.1074/jbc.M116.747089

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  49 in total

1.  Using NMRView to visualize and analyze the NMR spectra of macromolecules.

Authors:  Bruce A Johnson
Journal:  Methods Mol Biol       Date:  2004

2.  Understanding Rubredoxin Redox Potentials: Role of H-Bonds on Model Complexes.

Authors:  Ana Patricia Gámiz-Hernández; Artur S Galstyan; Ernst-Walter Knapp
Journal:  J Chem Theory Comput       Date:  2009-10-13       Impact factor: 6.006

3.  Key residues in Mycobacterium tuberculosis protein kinase G play a role in regulating kinase activity and survival in the host.

Authors:  Divya Tiwari; Rajnish Kumar Singh; Kasturi Goswami; Sunil Kumar Verma; Balaji Prakash; Vinay Kumar Nandicoori
Journal:  J Biol Chem       Date:  2009-07-28       Impact factor: 5.157

Review 4.  Role of oxidants in microbial pathophysiology.

Authors:  R A Miller; B E Britigan
Journal:  Clin Microbiol Rev       Date:  1997-01       Impact factor: 26.132

5.  Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch.

Authors:  Alaji Bah; Robert M Vernon; Zeba Siddiqui; Mickaël Krzeminski; Ranjith Muhandiram; Charlie Zhao; Nahum Sonenberg; Lewis E Kay; Julie D Forman-Kay
Journal:  Nature       Date:  2014-12-22       Impact factor: 49.962

6.  Expression and purification of the natively disordered and redox sensitive metal binding regions of Mycobacterium tuberculosis protein kinase G.

Authors:  Matthias Wittwer; Sonja A Dames
Journal:  Protein Expr Purif       Date:  2015-04-01       Impact factor: 1.650

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

Review 8.  The eukaryotic-like Ser/Thr protein kinases of Mycobacterium tuberculosis.

Authors:  Y Av-Gay; M Everett
Journal:  Trends Microbiol       Date:  2000-05       Impact factor: 17.079

9.  The Mycobacterium tuberculosis protein serine/threonine kinase PknG is linked to cellular glutamate/glutamine levels and is important for growth in vivo.

Authors:  Siobhan Cowley; Mary Ko; Neora Pick; Rayken Chow; Katrina J Downing; Bhavna G Gordhan; Joanna C Betts; Valerie Mizrahi; Debbie A Smith; Richard W Stokes; Yossef Av-Gay
Journal:  Mol Microbiol       Date:  2004-06       Impact factor: 3.501

10.  Downregulation of protein kinase C-alpha enhances intracellular survival of Mycobacteria: role of PknG.

Authors:  Shivendra K Chaurasiya; Kishore K Srivastava
Journal:  BMC Microbiol       Date:  2009-12-24       Impact factor: 3.605

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Authors:  Éva Kiss; Jana Knoppová; Guillem Pascual Aznar; Jan Pilný; Jianfeng Yu; Petr Halada; Peter J Nixon; Roman Sobotka; Josef Komenda
Journal:  Plant Cell       Date:  2019-07-18       Impact factor: 11.277

2.  Identifying RO9021 as a Potential Inhibitor of PknG from Mycobacterium tuberculosis: Combinative Computational and In Vitro Studies.

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Journal:  ACS Omega       Date:  2022-05-31

3.  Mycobacterium bovis PknG R242P Mutation Results in Structural Changes with Enhanced Virulence in the Mouse Model of Infection.

Authors:  Fábio Muniz de Oliveira; Victor Oliveira Procopio; Gabriela de Lima Menezes; Roosevelt Alves da Silva; André Kipnis; Ana Paula Junqueira-Kipnis
Journal:  Microorganisms       Date:  2022-03-22

4.  An Aspartate-Specific Solute-Binding Protein Regulates Protein Kinase G Activity To Control Glutamate Metabolism in Mycobacteria.

Authors:  Nabanita Bhattacharyya; Irene Nailain Nkumama; Zaccheus Newland-Smith; Li-Ying Lin; Wen Yin; Rebecca E Cullen; Jack S Griffiths; Alexander R Jarvis; Michael J Price; Pei Ying Chong; Russell Wallis; Helen M O'Hare
Journal:  mBio       Date:  2018-07-31       Impact factor: 7.867

5.  Cosolvent Sites-Based Discovery of Mycobacterium Tuberculosis Protein Kinase G Inhibitors.

Authors:  Osvaldo Burastero; Lucas A Defelipe; Gabriel Gola; Nancy L Tateosian; Elias D Lopez; Camila Belen Martinena; Juan Pablo Arcon; Martín Dodes Traian; Diana E Wetzler; Isabel Bento; Xavier Barril; Javier Ramirez; Marcelo A Marti; Maria M Garcia-Alai; Adrián G Turjanski
Journal:  J Med Chem       Date:  2022-06-23       Impact factor: 8.039

Review 6.  "It Takes Two to Tango": Role of Neglected Macrophage Manipulators Coronin 1 and Protein Kinase G in Mycobacterial Pathogenesis.

Authors:  Saradindu Saha; Payel Das; Somdeb BoseDasgupta
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  6 in total

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