Literature DB >> 27795332

Host-Based Peripheral Blood Gene Expression Analysis for Diagnosis of Infectious Diseases.

Zachary E Holcomb1, Ephraim L Tsalik2,3,4, Christopher W Woods2,3,5, Micah T McClain6,3,5.   

Abstract

Emerging pandemic infectious threats, inappropriate antibacterial use contributing to multidrug resistance, and increased morbidity and mortality from diagnostic delays all contribute to a need for improved diagnostics in the field of infectious diseases. Historically, diagnosis of infectious diseases has relied on pathogen detection; however, a novel concept to improve diagnostics in infectious diseases relies instead on the detection of changes in patterns of gene expression in circulating white blood cells in response to infection. Alterations in peripheral blood gene expression in the infected state are robust and reproducible, yielding diagnostic and prognostic information to help facilitate patient treatment decisions.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  diagnostics; gene expression

Mesh：

Year:  2016        PMID： 27795332      PMCID： PMC5277504          DOI： 10.1128/JCM.01057-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  28 in total

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Journal:  Lancet       Date:  2004-02-21       Impact factor: 79.321

2.  The Blood Sedimentation Test; Its History, Technique, Nature and Clinical Application.

Authors:  T R Waugh
Journal:  Can Med Assoc J       Date:  1923-08       Impact factor: 8.262

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Journal:  Blood       Date:  2006-11-14       Impact factor: 22.113

4.  Transcriptional profiling of Francisella tularensis infected peripheral blood mononuclear cells: a predictive tool for tularemia.

Authors:  Chrysanthi Paranavitana; Phillip R Pittman; Mahendran Velauthapillai; Elzbieta Zelazowska; Luis Dasilva
Journal:  FEMS Immunol Med Microbiol       Date:  2008-08-01

5.  An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis.

Authors:  Matthew P R Berry; Christine M Graham; Finlay W McNab; Zhaohui Xu; Susannah A A Bloch; Tolu Oni; Katalin A Wilkinson; Romain Banchereau; Jason Skinner; Robert J Wilkinson; Charles Quinn; Derek Blankenship; Ranju Dhawan; John J Cush; Asuncion Mejias; Octavio Ramilo; Onn M Kon; Virginia Pascual; Jacques Banchereau; Damien Chaussabel; Anne O'Garra
Journal:  Nature       Date:  2010-08-19       Impact factor: 49.962

6.  Identification of sepsis subtypes in critically ill adults using gene expression profiling.

Authors:  David M Maslove; Benjamin M Tang; Anthony S McLean
Journal:  Crit Care       Date:  2012-10-04       Impact factor: 9.097

7.  Transcriptional blood signatures distinguish pulmonary tuberculosis, pulmonary sarcoidosis, pneumonias and lung cancers.

Authors:  Chloe I Bloom; Christine M Graham; Matthew P R Berry; Fotini Rozakeas; Paul S Redford; Yuanyuan Wang; Zhaohui Xu; Katalin A Wilkinson; Robert J Wilkinson; Yvonne Kendrick; Gilles Devouassoux; Tristan Ferry; Makoto Miyara; Diane Bouvry; Dominique Valeyre; Valeyre Dominique; Guy Gorochov; Derek Blankenship; Mitra Saadatian; Phillip Vanhems; Huw Beynon; Rama Vancheeswaran; Melissa Wickremasinghe; Damien Chaussabel; Jacques Banchereau; Virginia Pascual; Ling-Pei Ho; Marc Lipman; Anne O'Garra
Journal:  PLoS One       Date:  2013-08-05       Impact factor: 3.240

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Authors:  Rina Das; Rasha Hammamieh; Roger Neill; George V Ludwig; Steven Eker; Patrick Lincoln; Preveen Ramamoorthy; Apsara Dhokalia; Sachin Mani; Chanaka Mendis; Christiano Cummings; Brian Kearney; Atabak Royaee; Xiao-Zhe Huang; Chrysanthi Paranavitana; Leonard Smith; Sheila Peel; Niranjan Kanesa-Thasan; David Hoover; Luther E Lindler; David Yang; Erik Henchal; Marti Jett
Journal:  BMC Infect Dis       Date:  2008-07-30       Impact factor: 3.090

9.  Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection.

Authors:  Asuncion Mejias; Blerta Dimo; Nicolas M Suarez; Carla Garcia; M Carmen Suarez-Arrabal; Tuomas Jartti; Derek Blankenship; Alejandro Jordan-Villegas; Monica I Ardura; Zhaohui Xu; Jacques Banchereau; Damien Chaussabel; Octavio Ramilo
Journal:  PLoS Med       Date:  2013-11-12       Impact factor: 11.069

10.  A blood RNA signature for tuberculosis disease risk: a prospective cohort study.

Authors:  Daniel E Zak; Adam Penn-Nicholson; Thomas J Scriba; Ethan Thompson; Sara Suliman; Lynn M Amon; Hassan Mahomed; Mzwandile Erasmus; Wendy Whatney; Gregory D Hussey; Deborah Abrahams; Fazlin Kafaar; Tony Hawkridge; Suzanne Verver; E Jane Hughes; Martin Ota; Jayne Sutherland; Rawleigh Howe; Hazel M Dockrell; W Henry Boom; Bonnie Thiel; Tom H M Ottenhoff; Harriet Mayanja-Kizza; Amelia C Crampin; Katrina Downing; Mark Hatherill; Joe Valvo; Smitha Shankar; Shreemanta K Parida; Stefan H E Kaufmann; Gerhard Walzl; Alan Aderem; Willem A Hanekom
Journal:  Lancet       Date:  2016-03-24       Impact factor: 79.321
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  25 in total

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Journal:  J Clin Microbiol       Date:  2019-06-25       Impact factor: 5.948

Review 2.  Incipient and Subclinical Tuberculosis: a Clinical Review of Early Stages and Progression of Infection.

Authors:  Paul K Drain; Kristina L Bajema; David Dowdy; Keertan Dheda; Kogieleum Naidoo; Samuel G Schumacher; Shuyi Ma; Erin Meermeier; David M Lewinsohn; David R Sherman
Journal:  Clin Microbiol Rev       Date:  2018-07-18       Impact factor: 26.132

3.  Cytokine and Gene Expression Profiling in Patients with HFE-Associated Hereditary Hemochromatosis according to Genetic Profile.

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4.  Human transcriptomic response to periprosthetic joint infection.

Authors:  Thao L Masters; Aditya V Bhagwate; Mrunal K Dehankar; Kerryl E Greenwood-Quaintance; Matthew P Abdel; Jay N Mandrekar; Robin Patel
Journal:  Gene       Date:  2022-03-17       Impact factor: 3.688

5.  Emerging Microtechnologies and Automated Systems for Rapid Bacterial Identification and Antibiotic Susceptibility Testing.

Authors:  Yiyan Li; Xing Yang; Weian Zhao
Journal:  SLAS Technol       Date:  2017-08-29       Impact factor: 3.047

6.  Host Gene Expression in Nose and Blood for the Diagnosis of Viral Respiratory Infection.

Authors:  Jinsheng Yu; Derick R Peterson; Andrea M Baran; Soumyaroop Bhattacharya; Todd N Wylie; Ann R Falsey; Thomas J Mariani; Gregory A Storch
Journal:  J Infect Dis       Date:  2019-04-01       Impact factor: 5.226

Review 7.  Recent trends in molecular diagnostics of yeast infections: from PCR to NGS.

Authors:  Toni Gabaldón
Journal:  FEMS Microbiol Rev       Date:  2019-09-01       Impact factor: 16.408

8.  Future Research Directions in Pneumonia. NHLBI Working Group Report.

Authors:  Charles S Dela Cruz; Richard G Wunderink; David C Christiani; Stephania A Cormier; Kristina Crothers; Claire M Doerschuk; Scott E Evans; Daniel R Goldstein; Purvesh Khatri; Lester Kobzik; Jay K Kolls; Bruce D Levy; Mark L Metersky; Michael S Niederman; Roomi Nusrat; Carlos J Orihuela; Paula Peyrani; Alice S Prince; Julio A Ramírez; Karen M Ridge; Sanjay Sethi; Benjamin T Suratt; Jacob I Sznajder; Ephraim L Tsalik; Allan J Walkey; Sachin Yende; Neil R Aggarwal; Elisabet V Caler; Joseph P Mizgerd
Journal:  Am J Respir Crit Care Med       Date:  2018-07-15       Impact factor: 21.405

9.  The effect of cell isolation methods on the human transcriptome profiling and microbial transcripts of peripheral blood.

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10.  TIPICO X: report of the 10th interactive infectious disease workshop on infectious diseases and vaccines.

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Journal:  Hum Vaccin Immunother       Date:  2020-08-05       Impact factor: 3.452
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