Literature DB >> 27782473

Fast, accurate 2D-MR relaxation exchange spectroscopy (REXSY): Beyond compressed sensing.

Ruiliang Bai1, Dan Benjamini1, Jian Cheng1, Peter J Basser1.   

Abstract

Previously, we showed that compressive or compressed sensing (CS) can be used to reduce significantly the data required to obtain 2D-NMR relaxation and diffusion spectra when they are sparse or well localized. In some cases, an order of magnitude fewer uniformly sampled data were required to reconstruct 2D-MR spectra of comparable quality. Nonetheless, this acceleration may still not be sufficient to make 2D-MR spectroscopy practicable for many important applications, such as studying time-varying exchange processes in swelling gels or drying paints, in living tissue in response to various biological or biochemical challenges, and particularly for in vivo MRI applications. A recently introduced framework, marginal distributions constrained optimization (MADCO), tremendously accelerates such 2D acquisitions by using a priori obtained 1D marginal distribution as powerful constraints when 2D spectra are reconstructed. Here we exploit one important intrinsic property of the 2D-MR relaxation exchange spectra: the fact that the 1D marginal distributions of each 2D-MR relaxation exchange spectrum in both dimensions are equal and can be rapidly estimated from a single Carr-Purcell-Meiboom-Gill (CPMG) or inversion recovery prepared CPMG measurement. We extend the MADCO framework by further proposing to use the 1D marginal distributions to inform the subsequent 2D data-sampling scheme, concentrating measurements where spectral peaks are present and reducing them where they are not. In this way we achieve compression or acceleration that is an order of magnitude greater than that in our previous CS method while providing data in reconstructed 2D-MR spectral maps of comparable quality, demonstrated using several simulated and real 2D T2 - T2 experimental data. This method, which can be called "informed compressed sensing," is extendable to other 2D- and even ND-MR exchange spectroscopy.

Entities:  

Year:  2016        PMID: 27782473      PMCID: PMC5074998          DOI: 10.1063/1.4964144

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  35 in total

1.  On the use of 2D correlation and exchange NMR spectroscopy in organic porous materials.

Authors:  Petrik Galvosas; Ying Qiao; Monika Schönhoff; Paul T Callaghan
Journal:  Magn Reson Imaging       Date:  2007-01-18       Impact factor: 2.546

2.  Observation of exchange of micropore water in cement pastes by two-dimensional T(2)-T(2) nuclear magnetic resonance relaxometry.

Authors:  L Monteilhet; J-P Korb; J Mitchell; P J McDonald
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-12-22

3.  Magnetic resonance in porous media: recent progress.

Authors:  Yi-Qiao Song; H Cho; Tim Hopper; Andrew E Pomerantz; Phillip Zhe Sun
Journal:  J Chem Phys       Date:  2008-02-07       Impact factor: 3.488

4.  Water diffusion, T(2), and compartmentation in frog sciatic nerve.

Authors:  S Peled; D G Cory; S A Raymond; D A Kirschner; F A Jolesz
Journal:  Magn Reson Med       Date:  1999-11       Impact factor: 4.668

5.  T2-Filtered T2 - T2 Exchange NMR.

Authors:  Marcel Nogueira d'Eurydice; Elton Tadeu Montrazi; Carlos Alberto Fortulan; Tito José Bonagamba
Journal:  J Chem Phys       Date:  2016-05-28       Impact factor: 3.488

6.  The robust identification of exchange from T2-T2 time-domain features.

Authors:  Ruobing Song; Yi-Qiao Song; Muthusamy Vembusubramanian; Jeffrey L Paulsen
Journal:  J Magn Reson       Date:  2016-02-10       Impact factor: 2.229

7.  Effect of intercompartmental water exchange on the apparent myelin water fraction in multiexponential T2 measurements of rat spinal cord.

Authors:  Kevin D Harkins; Adrienne N Dula; Mark D Does
Journal:  Magn Reson Med       Date:  2011-06-28       Impact factor: 4.668

8.  Insights into brain microstructure from the T2 distribution.

Authors:  Alex MacKay; Cornelia Laule; Irene Vavasour; Thorarin Bjarnason; Shannon Kolind; Burkhard Mädler
Journal:  Magn Reson Imaging       Date:  2006-03-20       Impact factor: 2.546

9.  Dependencies of multi-component T2 and T1ρ relaxation on the anisotropy of collagen fibrils in bovine nasal cartilage.

Authors:  Nian Wang; Yang Xia
Journal:  J Magn Reson       Date:  2011-07-07       Impact factor: 2.229

10.  Mapping human brain capillary water lifetime: high-resolution metabolic neuroimaging.

Authors:  William D Rooney; Xin Li; Manoj K Sammi; Dennis N Bourdette; Edward A Neuwelt; Charles S Springer
Journal:  NMR Biomed       Date:  2015-04-27       Impact factor: 4.044

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  6 in total

1.  Water mobility spectral imaging of the spinal cord: Parametrization of model-free Laplace MRI.

Authors:  Dan Benjamini; Peter J Basser
Journal:  Magn Reson Imaging       Date:  2018-12-22       Impact factor: 2.546

2.  Magnetic resonance microdynamic imaging reveals distinct tissue microenvironments.

Authors:  Dan Benjamini; Peter J Basser
Journal:  Neuroimage       Date:  2017-09-22       Impact factor: 6.556

3.  Rapid detection of the presence of diffusion exchange.

Authors:  Teddy X Cai; Dan Benjamini; Michal E Komlosh; Peter J Basser; Nathan H Williamson
Journal:  J Magn Reson       Date:  2018-10-10       Impact factor: 2.229

4.  Generalized Mean Apparent Propagator MRI to Measure and Image Advective and Dispersive Flows in Medicine and Biology.

Authors:  Dan Benjamini; Michal E Komlosh; Nathan H Williamson; Peter J Basser
Journal:  IEEE Trans Med Imaging       Date:  2018-07-12       Impact factor: 10.048

5.  Magnetic resonance measurements of cellular and sub-cellular membrane structures in live and fixed neural tissue.

Authors:  Nathan H Williamson; Rea Ravin; Dan Benjamini; Hellmut Merkle; Melanie Falgairolle; Michael James O'Donovan; Dvir Blivis; Dave Ide; Teddy X Cai; Nima S Ghorashi; Ruiliang Bai; Peter J Basser
Journal:  Elife       Date:  2019-12-12       Impact factor: 8.140

6.  Retaining information from multidimensional correlation MRI using a spectral regions of interest generator.

Authors:  Kristofor Pas; Michal E Komlosh; Daniel P Perl; Peter J Basser; Dan Benjamini
Journal:  Sci Rep       Date:  2020-02-24       Impact factor: 4.379

  6 in total

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