Literature DB >> 27780789

Drug repurposing by integrated literature mining and drug-gene-disease triangulation.

Peng Sun1, Jiong Guo2, Rainer Winnenburg3, Jan Baumbach4.   

Abstract

Drug design is expensive, time-consuming and becoming increasingly complicated. Computational approaches for inferring potentially new purposes of existing drugs, referred to as drug repositioning, play an increasingly important part in current pharmaceutical studies. Here, we first summarize recent developments in computational drug repositioning and introduce the utilized data sources. Afterwards, we introduce a new data fusion model based on n-cluster editing as a novel multi-source triangulation strategy, which was further combined with semantic literature mining. Our evaluation suggests that utilizing drug-gene-disease triangulation coupled to sophisticated text analysis is a robust approach for identifying new drug candidates for repurposing.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2016        PMID: 27780789     DOI: 10.1016/j.drudis.2016.10.008

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  8 in total

1.  A new computational drug repurposing method using established disease-drug pair knowledge.

Authors:  Nafiseh Saberian; Azam Peyvandipour; Michele Donato; Sahar Ansari; Sorin Draghici
Journal:  Bioinformatics       Date:  2019-10-01       Impact factor: 6.937

2.  Drug Repositioning in the Mirror of Patenting: Surveying and Mining Uncharted Territory.

Authors:  Hermann A M Mucke
Journal:  Front Pharmacol       Date:  2017-12-15       Impact factor: 5.810

3.  Exploring Drug Treatment Patterns Based on the Action of Drug and Multilayer Network Model.

Authors:  Liang Yu; Yayong Shi; Quan Zou; Shuhang Wang; Liping Zheng; Lin Gao
Journal:  Int J Mol Sci       Date:  2020-07-16       Impact factor: 5.923

4.  Studies on Isoniazid Derivatives through a Medicinal Chemistry Approach for the Identification of New Inhibitors of Urease and Inflammatory Markers.

Authors:  Fazila Rizvi; Majid Khan; Almas Jabeen; Hina Siddiqui; M Iqbal Choudhary
Journal:  Sci Rep       Date:  2019-05-01       Impact factor: 4.379

5.  Active repurposing of drug candidates for melanoma based on GWAS, PheWAS and a wide range of omics data.

Authors:  Ali Khosravi; B Jayaram; Bahram Goliaei; Ali Masoudi-Nejad
Journal:  Mol Med       Date:  2019-06-20       Impact factor: 6.354

Review 6.  Artificial Intelligence in Drug Discovery: A Comprehensive Review of Data-driven and Machine Learning Approaches.

Authors:  Hyunho Kim; Eunyoung Kim; Ingoo Lee; Bongsung Bae; Minsu Park; Hojung Nam
Journal:  Biotechnol Bioprocess Eng       Date:  2021-01-07       Impact factor: 3.386

7.  An Evaluation Model for the Influence Factors of Interest in Literature Courses Based on Data Analysis and Association Rules in a Small-Sample Environment.

Authors:  Yiqian Zhao
Journal:  J Environ Public Health       Date:  2022-09-09

Review 8.  Drug Repositioning for Effective Prostate Cancer Treatment.

Authors:  Beste Turanli; Morten Grøtli; Jan Boren; Jens Nielsen; Mathias Uhlen; Kazim Y Arga; Adil Mardinoglu
Journal:  Front Physiol       Date:  2018-05-15       Impact factor: 4.566

  8 in total

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