| Literature DB >> 27775674 |
Lucie Pinasseau1, Arnaud Verbaere2, Maryline Roques3,4,5, Emmanuelle Meudec6, Anna Vallverdú-Queralt7, Nancy Terrier8, Jean-Claude Boulet9, Véronique Cheynier10, Nicolas Sommerer11.
Abstract
A rapid, sensitive, and selective analysis method using ultra high performance liquid chromatography coupled with triple-quadrupole mass spectrometry (UHPLC-QqQ-MS) has been developed for the characterization and quantification of grape skin flavan-3-ols after acid-catalysed depolymerization in the presence of phloroglucinol (phloroglucinolysis). The compound detection being based on specific MS transitions in Multiple Reaction Monitoring (MRM) mode, this fast gradient robust method allows analysis of constitutive units of grape skin proanthocyanidins, including some present in trace amounts, in a single injection, with a throughput of 6 samples per hour. This method was applied to a set of 214 grape skin samples from 107 different red and white grape cultivars grown under two conditions in the vineyard, irrigated or non-irrigated. The results of triplicate analyses confirmed the robustness of the method, which was thus proven to be suitable for high-throughput and large-scale metabolomics studies. Moreover, these preliminary results suggest that analysis of tannin composition is relevant to investigate the genetic bases of grape response to drought.Entities:
Keywords: grapes; metabolomics; method validation; phloroglucinolysis; quantitative UHPLC-QqQ-MS; tannins
Mesh:
Substances:
Year: 2016 PMID: 27775674 PMCID: PMC6273201 DOI: 10.3390/molecules21101409
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Acid-catalysed depolymerization of a proanthocyanidin dimer in the presence of phloroglucinol.
Figure 2Superimposition of MRM traces from the UHPLC-QqQ-MS analysis of proanthocyanidin units of a grape skin extract after phloroglucinolysis; (a) 4× zoomed display; (b) full display.
List of quantified compounds, MRM parameters (ion mode, precursor and product ions m/z, retention times), and calibration ranges.
| Position | Compound | Ion Mode | Retention Time (min) | Calibration Range (µmol/L) | |||
|---|---|---|---|---|---|---|---|
| Upper units | Cup | + | 415.1 | 127.1 | 289.1 | 3.46 | as equivalents of ECterm |
| ECup | + | 415.1 | 127.1 | 289.1 | 4.09 | as equivalents of ECterm | |
| EGCup | + | 431.2 | 127.1 | 305.1 | 1.98 | as equivalents of ECterm | |
| ECGup | + | 567.2 | 153.1 | 247.2 | 4.94 | as equivalents of ECterm | |
| Terminal units | Cterm | + | 291.1 | 139.0 | 123.1 | 4.90 | 0.01–333.33 µmol/L |
| ECterm | + | 291.1 | 139.0 | 123.1 | 5.43 | 0.02–333.33 µmol/L | |
| GCterm | + | 307.1 | 139.0 | 151.0 | 3.23 | as equivalents of EGCterm | |
| EGCterm | + | 307.1 | 139.0 | 151.0 | 4.87 | 0.01–333.33 µmol/L | |
| ECGterm | + | 443.1 | 123.1 | 273.1 | 5.76 | 0.02–333.33 µmol/L |
a span: 0.2. +, positive.
Figure 3Fragmentation scheme for epicatechin gallate terminal unit in positive ionization mode. The fragmentation pathway involving benzofuran-forming fission (BFF) is demonstrated.
Composition of the grape skin extract used for validation compared to the range of concentrations and average concentrations measured in a panel of 50 red and white grape skin extracts.
| Grape Skin Extract | Cup | ECup | EGCup | ECGup | Cterm | ECterm | GCterm | EGCterm | ECGterm |
|---|---|---|---|---|---|---|---|---|---|
| Concentration (µmol/L) | |||||||||
| Composition of the extract used for validation | 0.6 | 168.9 | 104.6 | 14.2 | 13.3 | 0.9 | 4.0 | 0.7 | 0.4 |
| Average of measured concentrations | 0.6 | 109.5 | 51.0 | 7.1 | 14.1 | 1.3 | 4.7 | 0.7 | 0.4 |
| Lowest measured concentration | 0.14 | 18.0 | 1.5 | 0.9 | 3.1 | 0.2 | 0.4 | 0.02 | 0.06 |
| Highest measured concentration | 1.6 | 270.1 | 131.3 | 31.2 | 48.4 | 4.5 | 11.5 | 3.7 | 1.9 |
Concentration levels (µmol/L) for each compound in the solutions used for method validation and method validation parameters: limits of detection (LOD) and quantification (LOQ), recovery and precisions intra and inter-day, suppression/enhancement effect and stability at different concentration levels (GE: grape skin extract used for method validation (Table 2) A–G: standard solutions, Supplementary Materials, Table S2).
| ECup | EGCup | ECGup | Cterm | ECterm | EGCterm | ECGterm | |
|---|---|---|---|---|---|---|---|
| Concentration (µmol/L) | |||||||
| GE + A | 238.1 | ||||||
| GE + B | 166.6 | ||||||
| GE + C | 1074 | 171.7 | 101.4 | 536.7 | 489.2 | 110 | |
| GE + D | 358.4 | 98.9 | 33.4 | 141.3 | 122.8 | 47.4 | 27.7 |
| GE + E | 179.6 | 80.7 | 15.9 | 17.7 | 8.3 | 3.4 | 2 |
| GE + F | 131.9 | 75.9 | 11.2 | 9.8 | 0.9 | 0.5 | 0.4 |
| GE + G | 121.8 | 74.8 | 10.3 | 9.5 | 0.6 | 0.3 | |
| GE | 120 | 74.3 | 10 | 9.5 | 0.643 | 0.5 | 0.285 |
| LOD (µmol/L) | 0.026 | 0.008 | 0.029 | 0.021 | 0.008 | 0.002 | 0.007 |
| (nmol/g of grape skin) | 1.456 | 0.448 | 1.624 | 1.176 | 0.448 | 0.112 | 0.392 |
| LOQ (µmol/L) | 0.086 | 0.027 | 0.096 | 0.070 | 0.026 | 0.006 | 0.023 |
| (nmol/g of grape skin) | 4.816 | 1.512 | 5.376 | 3.920 | 1.456 | 0.336 | 1.288 |
| A | n.d | 95.0 ± 5.1 | n.d | n.d | n.d | n.d | n.d |
| B | n.d | 101.0 ± 5.9 | n.d | n.d | n.d | n.d | n.d |
| C | 98.0 ± 4.1 | 92.3 ± 5.4 | 85.0 ± 5.6 | 106.7 ± 4.6 | 132.7 ± 4.1 | n.a | 110.7 ± 4.9 |
| D | 104.3 ± 2.5 | 98.7 ± 3.4 | 98.3 ± 4.4 | 97.3 ± 3.5 | 124.3 ± 1.9 | 70.7 ± 2.8 | 114.0 ± 2.1 |
| E | 112.7 ± 2.9 | n.a | 95.0 ± 3.4 | 102.0 ± 4.4 | 127.3 ± 2.9 | 69.3 ± 3.8 | 113.3 ± 2.1 |
| F | n.a | n.a | n.a | 103.4 ± 0.6 | 116.3 ± 1.7 | 73.3 ± 2.0 | 107.0 ± 1.8 |
| G | n.a | n.a | n.a | n.a | 118.0 ± 3.3 | n.a | 108.3 ± 3.1 |
| C | 5 | 9 | 5 | 6 | 7 | n.a | 7 |
| D | 3 | 6 | 6 | 3 | 3 | 3 | 5 |
| E | 6 | n.a | 6 | 5 | 6 | 3 | 4 |
| F | n.a | n.a | n.a | 5 | 5 | 3 | 7 |
| G | n.a | n.a | n.a | n.a | 8 | n.a | 9 |
| A | n.d | 5 | n.d | n.d | n.d | n.d | n.d |
| B | n.d | 6 | n.d | n.d | n.d | n.d | n.d |
| C | 4 | 5 | 5 | 5 | 6 | n.a | 6 |
| D | 2 | 3 | 4 | 3 | 2 | 2 | 2 |
| E | 3 | n.a | 3 | 5 | 5 | 3 | 2 |
| F | n.a | n.a | n.a | 1 | 2 | 1 | 2 |
| G | n.a | n.a | n.a | n.a | 3 | n.a | 3 |
| A | n.d | 85.0 ± 10.0 | n.d | n.d | n.d | n.d | n.d |
| B | n.d | 96.0 ± 13.0 | n.d | n.d | n.d | n.d | n.d |
| C | 99.7 ± 4.3 | 105.0 ± 28.3 | 91.3 ± 5.3 | 104.0 ± 5.0 | 103.0 ± 4.0 | n.a | 97.7 ± 5.0 |
| D | 105.0 ± 2.3 | 91.0 ± 21.7 | 92.0 ± 4.6 | 104.3 ± 3.6 | 103.7 ± 2.0 | 110.3 ± 3.0 | 99.7 ± 2.0 |
| E | 120.3 ± 6.0 | n.a | 95.6 ± 5.0 | 110.3 ± 5.0 | 107.0 ± 4.3 | 106.7 ± 4.3 | 104.7 ± 2.3 |
| F | n.a | n.a | n.a | 116.3 ± 1.0 | 99.3 ± 2.0 | 101.3 ± 2.3 | 94.7 ± 1.7 |
| G | n.a | n.a | n.a | n.a | 99.3 ± 3.3 | n.a | 100.0 ± 3.7 |
| 24 h | |||||||
| C | 8 | 8 | 1 | 7 | n.a | n.a | 8 |
| E | 4 | n.a | 5 | 4 | 1 | 1 | 4 |
| G | n.a | n.a | n.a | n.a | 7 | n.a | 3 |
| 48 h | |||||||
| C | 9 | 6 | 0 | 8 | 8 | n.a | 9 |
| E | 7 | n.a | 2 | 4 | 2 | 4 | 10 |
| G | n.a | n.a | n.a | n.a | 15 | n.a | 21 |
n.d: non detected; n.a: not applicable (value lower than the variation coefficient of the mass signal).
Figure 4Projection of the grape samples on the first two principal components of the PCA performed on the skin flavan-3-ol composition data (Cup, ECup, EGCup, ECGup, Cterm, ECterm, GCterm, EGCterm and ECGterm; mg/g berry skin; centred reduced data).
Figure 5Projection of the variables on the first two principal components, PC1 () and PC2 (), of the PCA performed on the skin flavan-3-ol composition data mg/g berry skin; centered reduced data).