Literature DB >> 27768252

DNA barcoding of tuberous Orchidoideae: a resource for identification of orchids used in Salep.

Abdolbaset Ghorbani1,2, Barbara Gravendeel3,4, Sugirthini Selliah5, Shahin Zarré6, Hugo de Boer1,3,5.   

Abstract

Tubers of terrestrial orchids are harvested and traded from the eastern Mediterranean to the Caspian Sea for the traditional product Salep. Overexploitation of wild populations and increased middle-class prosperity have escalated prices for Salep, causing overharvesting, depletion of native populations and providing an incentive to expand harvesting to untapped areas in Iran. Limited morphological distinctiveness among traded Salep tubers renders species identification impossible, making it difficult to establish which species are targeted and affected the most. In this study, a reference database of 490 nrITS, trnL-F spacer and matK sequences of 133 taxa was used to identify 150 individual tubers from 31 batches purchased in 12 cities in Iran to assess species diversity in commerce. The sequence reference database consisted of 211 nrITS, 158 trnL-F and 121 matK sequences, including 238 new sequences from collections made for this study. The markers enabled unambiguous species identification with tree-based methods for nrITS in 67% of the tested tubers, 58% for trnL-F and 59% for matK. Species in the genera Orchis (34%), Anacamptis (27%) and Dactylorhiza (19%) were the most common in Salep. Our study shows that all tuberous orchid species in this area are threatened by this trade, and further stresses the urgency of controlling illegal harvesting and cross-border trade of Salep tubers.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  zzm321990CITESzzm321990; molecular identification; orchid conservation; overharvesting; plant DNA barcoding; wildlife trade

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Year:  2016        PMID: 27768252     DOI: 10.1111/1755-0998.12615

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  7 in total

1.  DNA metabarcoding of orchid-derived products reveals widespread illegal orchid trade.

Authors:  Hugo J de Boer; Abdolbaset Ghorbani; Vincent Manzanilla; Ancuta-Cristina Raclariu; Anna Kreziou; Sarawut Ounjai; Maslin Osathanunkul; Barbara Gravendeel
Journal:  Proc Biol Sci       Date:  2017-09-27       Impact factor: 5.349

2.  Molecular characterization of endangered Iranian terrestrial orchids using ISSR markers and association with floral and tuber-related phenotypic traits.

Authors:  Soheila Gholami; Yavar Vafaee; Farzad Nazari; Abdolbaset Ghorbani
Journal:  Physiol Mol Biol Plants       Date:  2021-01-16

3.  Exploring genetic variations in threatened medicinal orchids using start codon targeted (SCoT) polymorphism and marker-association with seed morphometric traits.

Authors:  Soheila Gholami; Yavar Vafaee; Farzad Nazari; Abdolbaset Ghorbani
Journal:  Physiol Mol Biol Plants       Date:  2021-03-23

4.  Turkish graveyards as refuges for orchids against tuber harvest.

Authors:  Attila Molnár V; Timea Nagy; Viktor Löki; Kristóf Süveges; Attila Takács; Judit Bódis; Jácint Tökölyi
Journal:  Ecol Evol       Date:  2017-11-23       Impact factor: 2.912

5.  Trade in Zambian Edible Orchids-DNA Barcoding Reveals the Use of Unexpected Orchid Taxa for Chikanda.

Authors:  Sarina Veldman; Seol-Jong Kim; Tinde R van Andel; Maria Bello Font; Ruth E Bone; Benny Bytebier; David Chuba; Barbara Gravendeel; Florent Martos; Geophat Mpatwa; Grace Ngugi; Royd Vinya; Nicholas Wightman; Kazutoma Yokoya; Hugo J de Boer
Journal:  Genes (Basel)       Date:  2018-11-30       Impact factor: 4.096

6.  DNA barcoding of medicinal orchids in Asia.

Authors:  Bhakta Bahadur Raskoti; Rita Ale
Journal:  Sci Rep       Date:  2021-12-08       Impact factor: 4.379

7.  Veronica officinalis Product Authentication Using DNA Metabarcoding and HPLC-MS Reveals Widespread Adulteration with Veronica chamaedrys.

Authors:  Ancuta C Raclariu; Andrei Mocan; Madalina O Popa; Laurian Vlase; Mihael C Ichim; Gianina Crisan; Anne K Brysting; Hugo de Boer
Journal:  Front Pharmacol       Date:  2017-06-19       Impact factor: 5.810

  7 in total

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