Literature DB >> 27766355

Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis nov.

Hiroko Makita1,2, Emiko Tanaka3,4, Satoshi Mitsunobu5, Masayuki Miyazaki3, Takuro Nunoura3, Katsuyuki Uematsu6, Yoshihiro Takaki3, Shinro Nishi3, Shigeru Shimamura3, Ken Takai3.   

Abstract

A novel iron-oxidizing chemolithoautotrophic bacterium, strain ET2T, was isolated from a deep-sea sediment in a hydrothermal field of the Bayonnaise knoll of the Izu-Ogasawara arc. Cells were bean-shaped, curved short rods. Growth was observed at a temperature range of 15-30 °C (optimum 25 °C, doubling time 24 h) and a pH range of 5.8-7.0 (optimum pH 6.4) in the presence of NaCl at a range of 1.0-4.0 % (optimum 2.75 %). The isolate was a microaerophilic, strict chemolithoautotroph capable of growing using ferrous iron and molecular oxygen (O2) as the sole electron donor and acceptor, respectively; carbon dioxide as the sole carbon source; and either ammonium or nitrate as the sole nitrogen source. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the new isolate was related to the only previously isolated Mariprofundus species, M. ferrooxydans. Although relatively high 16S rRNA gene similarity (95 %) was found between the new isolate and M. ferrooxydans, the isolate was distinct in terms of cellular fatty acid composition, genomic DNA G+C content and cell morphology. Furthermore, genomic comparison between ET2T and M. ferrooxydans PV-1 indicated that the genomic dissimilarity of these strains met the standard for species-level differentiation. On the basis of its physiological and molecular characteristics, strain ET2T (= KCTC 15556T = JCM 30585 T) represents a novel species of Mariprofundus, for which the name Mariprofundus micogutta is proposed. We also propose the subordinate taxa Mariprofundales ord. nov. and Zetaproteobacteria classis nov. in the phylum Proteobacteria.

Entities:  

Keywords:  Bayonnaise knoll; Hydrothermal field; Iron-oxidizing bacteria; Mariprofundus sp.; Zetaproteobacteria

Mesh:

Substances:

Year:  2016        PMID: 27766355     DOI: 10.1007/s00203-016-1307-4

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  16 in total

Review 1.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

2.  Genomic Insights into Two Novel Fe(II)-Oxidizing Zetaproteobacteria Isolates Reveal Lifestyle Adaption to Coastal Marine Sediments.

Authors:  Nia Blackwell; Casey Bryce; Daniel Straub; Andreas Kappler; Sara Kleindienst
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

3.  Complex Microbial Communities Drive Iron and Sulfur Cycling in Arctic Fjord Sediments.

Authors:  J Buongiorno; L C Herbert; L M Wehrmann; A B Michaud; K Laufer; H Røy; B B Jørgensen; A Szynkiewicz; A Faiia; K M Yeager; K Schindler; K G Lloyd
Journal:  Appl Environ Microbiol       Date:  2019-07-01       Impact factor: 4.792

Review 4.  Iron-oxidizing bacteria in marine environments: recent progresses and future directions.

Authors:  Hiroko Makita
Journal:  World J Microbiol Biotechnol       Date:  2018-07-04       Impact factor: 3.312

5.  Aerobic and anaerobic iron oxidizers together drive denitrification and carbon cycling at marine iron-rich hydrothermal vents.

Authors:  Sean M McAllister; Rebecca Vandzura; Jessica L Keffer; Shawn W Polson; Clara S Chan
Journal:  ISME J       Date:  2020-12-17       Impact factor: 10.302

6.  Prokaryotic Community Composition in Arctic Kongsfjorden and Sub-Arctic Northern Bering Sea Sediments As Revealed by 454 Pyrosequencing.

Authors:  Yin-Xin Zeng; Yong Yu; Hui-Rong Li; Wei Luo
Journal:  Front Microbiol       Date:  2017-12-12       Impact factor: 5.640

7.  Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov., sp. nov.

Authors:  Jiro F Mori; Jarrod J Scott; Kevin W Hager; Craig L Moyer; Kirsten Küsel; David Emerson
Journal:  ISME J       Date:  2017-08-18       Impact factor: 10.302

8.  Zetaproteobacteria Pan-Genome Reveals Candidate Gene Cluster for Twisted Stalk Biosynthesis and Export.

Authors:  Elif Koeksoy; Oliver M Bezuidt; Timm Bayer; Clara S Chan; David Emerson
Journal:  Front Microbiol       Date:  2021-06-18       Impact factor: 5.640

9.  A Journey across Genomes Uncovers the Origin of Ubiquinone in Cyanobacteria.

Authors:  Mauro Degli Esposti
Journal:  Genome Biol Evol       Date:  2017-11-01       Impact factor: 3.416

10.  Novel Pelagic Iron-Oxidizing Zetaproteobacteria from the Chesapeake Bay Oxic-Anoxic Transition Zone.

Authors:  Beverly K Chiu; Shingo Kato; Sean M McAllister; Erin K Field; Clara S Chan
Journal:  Front Microbiol       Date:  2017-07-18       Impact factor: 5.640

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