| Literature DB >> 27763569 |
Yafeng Wang1,2,3, Mingxu Wang4, Xiaoqing Zhang5, Jing Nie6, Ming Zhang7, Xiaohong Liu8, Le Ma9.
Abstract
The purpose of this study was to evaluate the association of the hepatic lipase (LIPC) rs493258 polymorphism and susceptibility to age-related macular degeneration (AMD). A systematic search in PubMed, EMBASE, and ISI web of science databases was performed to identify eligible published studies without language restrictions up to April 2016. Pooled odds ratios (ORs) with 95% confidence intervals (CIs) in different stages of AMD were estimated under different genetic models using meta-analytic methods. Seven studies comprising 20,559 cases and 17,200 controls met the inclusion criteria and were included in the meta-analysis. The LIPC rs493258 polymorphism showed a significant association with a lower risk of AMD under the allelic model (OR = 0.87, 95% CI = 0.84-0.90). Significant relationships between the variant and AMD were also observed in other genetic models (OR ranging from 0.71 to 0.86, all p < 0.05). Stratified analysis based on ethnicity found that LIPC rs493258 polymorphism had a significant association with the decreased risk of the disease in the Caucasian population, but not in the Asian population. For late AMD, significant associations of the rs493258 polymorphism with a lower risk of this disease were also observed in the allelic genetic model (OR = 0.87, 95% CI = 0.83-0.90). This meta-analysis demonstrates that the T allele in the LIPC rs493258 polymorphism was significantly associated with the risk of any and late AMD. The associations of the locus with early and late AMD risk in various populations need further exploration.Entities:
Keywords: LIPC; age-related macular degeneration; meta-analysis; polymorphism
Mesh:
Substances:
Year: 2016 PMID: 27763569 PMCID: PMC5086761 DOI: 10.3390/ijerph13101022
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Figure 1The flowchart of study inclusion and exclusion.
Characteristics of studies included in this meta-analysis of the LIPC rs493258 polymorphism and age-related macular degeneration.
| Source | Country | Study Design | Sample Size (Case/Control) | Mean Age, y (Case/Control) | Classification Criteria | Type of Case | Genotyping Method | Adjustment * | HWE | Study Quality ** |
|---|---|---|---|---|---|---|---|---|---|---|
| Neale et al., 2010 [ | USA | GWAS | 6768/5943 | 79.5/74.2 | CARMS | Late AMD | iPLEX, AFFY | Yes | Yes | High |
| Chen et al., 2010 [ | ||||||||||
| Discovery | USA | GWAS | 2157/1150 | 78.6/74.1 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Tufts/MGH II | USA | GWAS | 798/1632 | 79.7/73.0 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Tufts/MGH | USA | GWAS | 821/1709 | 80.3/74.1 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Johns Hopkins | USA | GWAS | 641/122 | 75.5/74.7 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Penn-NJ | USA | GWAS | 556/347 | 79.8/75.6 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Oregon | USA | GWAS | 509/253 | 79.8/74.0 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Spain | Spain | GWAS | 348/276 | 76.7/75.1 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| ME | USA | GWAS | 386/190 | 76.0/75.4 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| CWR | USA | GWAS | 1178/1430 | 78.5/72.5 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Pittsburgh | USA | GWAS | 170/143 | 69.9/76.7 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| MDV | USA | GWAS | 690/245 | 75.7/68.4 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Japan | Japan | GWAS | 654/333 | 74.8/74.2 | CARMS | Any AMD | ILMN | Yes | Yes | High |
| Peter et al., 2011 [ | European | Case-control | 146/1269 | 74.5/73.6 | WARMGS | Any AMD and late AMD | TM, AB | No | Yes | High |
| Cipriani et al., 2012 [ | UK | GWAS | 893/2199 | 78.6/44.5 | ICGS | Late AMD | ILMN | No | NP | High |
| Merle et al., 2013 [ | European | Case-control | 347/1031 | 78.3/76.5 | ICGS | Any AMD and late AMD | TM, AB | Yes | Yes | High |
| Zhang et al., 2013 [ | China | Case-control | 157/204 | 65.4/69.0 | NR | Late AMD | TM, AB | Yes | NP | High |
| Lee et al., 2013 [ | USA | GWAS | 1626/859 | 79.3/72.6 | ICGS | Late AMD | AB | No | Yes | High |
AB: Applied Biosystems; AFFY: Affymetrix SNP GeneChip; AMD: age-related macular degeneration; CARMS: Clinical Age-Related Maculopathy Staging System; CIRCL: the Cologne Image Reading Center and Laboratory; GWAS: genome-wide association study; HWE: Hardy-Weinberg equilibrium in controls; ICGS: International Classification and Grading System; ILMN: Illumina Human CNV370v1 Bead Array; MAF: minor allele frequency in control; MALDI-TOF MS: matrix-assisted laser desorption ionization-time-of-flight mass spectrometry; NR: not reported; TM: TaqMan; WARMGS: Wisconsin Age-related Maculopathy Grading System. * Adjust for CFH gene. ** Study quality was judged based on Newcastle-Ottawa Scale.
Figure 2Forest plot on the associations between the LIPC rs493258 polymorphism and age-related macular degeneration (AMD) under the different genetic models. The boxes and lines indicate the odds ratios (ORs) and their 95% confidence intervals (CIs) on a log scale for each study. The pooled odds ratio is represented by a diamond. The size of the black squares indicates the relative weight of each estimate. (a) T vs. C; (b) TC vs. CC; (c) TT vs. CC; (d) (TT + TC) vs. CC.
Stratified analysis of the association between the LIPC rs493258 polymorphism and age-related macular degeneration in the allelic (T vs. C) genetic model.
| Subgroup | N | Cases/Controls | Pooled OR (CI) |
| |
|---|---|---|---|---|---|
| Heterogeneity | Meta-Regression | ||||
| Any AMD | 16 | 20,559/17,200 | 0.87 (0.84, 0.90) | 0.89 | |
| Late AMD | 4 | 11,650/10,307 | 0.87 (0.83, 0.90) | 0.85 | |
| Ethnicity | |||||
| Caucasians | 14 | 19,712/16,714 | 0.87 (0.84, 0.89) | 0.83 | 0.43 |
| Asians | 2 | 847/486 | 0.88 (0.72, 1.05) | 0.49 | |
| Age of case | |||||
| ≥75 | 13 | 18,022/16,469 | 0.86 (0.83, 0.89) | 0.90 | 0.22 |
| <75 | 3 | 1537/731 | 0.93 (0.80, 1.06) | 0.51 | |
| Study design | |||||
| GWAS | 15 | 20,355/17,043 | 0.87 (0.84, 0.89) | 0.88 | 0.76 |
| Case-control | 1 | 204/157 | 0.99 (0.65, 1.34) | ||
| Adjusting for CFH gene | |||||
| Yes | 14 | 15,881/12,993 | 0.87 (0.83, 0.90) | 0.81 | 0.25 |
| No | 2 | 4678/4207 | 0.88 (0.80, 0.95) | 0.68 | |
Figure 3Forest plot on the association between the LIPC rs493258 polymorphism and late age-related macular degeneration (AMD) under the allelic (T vs. C) genetic model. The boxes and lines indicate the odds ratios (ORs) and their 95% confidence intervals (CIs) on a log scale for each study. The pooled odds ratio is represented by a diamond. The size of the black squares indicates the relative weight of each estimate.