Literature DB >> 27761405

Draft genome sequence of Mycobacterium tuberculosis strain B9741 of Beijing B0/W lineage from HIV positive patient from Siberia.

K V Shur1, M V Zaychikova1, N E Mikheecheva1, K M Klimina1, O B Bekker1, S N Zhdanova2, O B Ogarkov2, V N Danilenko1.   

Abstract

We report a draft genome sequence of Mycobacterium tuberculosis strain B9741 belonging to Beijing B0/W lineage isolated from a HIV patient from Siberia, Russia. This clinical isolate showed MDR phenotype and resistance to isoniazid, rifampin, streptomycin and pyrazinamide. We analyzed SNPs associated with virulence and resistance. The draft genome sequence and annotation have been deposited at GenBank under the accession NZ_LVJJ00000000.

Entities:  

Keywords:  Beijing lineage; HIV; Mycobacterium tuberculosis; Virulence; draft genome sequencing

Year:  2016        PMID： 27761405      PMCID： PMC5064989          DOI： 10.1016/j.gdata.2016.08.001

Source DB:  PubMed          Journal:  Genom Data        ISSN： 2213-5960


  10 in total

Review 1.  The PIN-domain toxin-antitoxin array in mycobacteria.

Authors:  Vickery L Arcus; Paul B Rainey; Susan J Turner
Journal:  Trends Microbiol       Date:  2005-08       Impact factor: 17.079

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Journal:  J Clin Microbiol       Date:  2012-08-29       Impact factor: 5.948

Review 3.  [The virulence factors of Mycobacterium tuberculosis: genetic control, new conceptions].

Authors:  A A Prozorov; I A Fedorova; O B Bekker; V N Danilenko
Journal:  Genetika       Date:  2014-08

4.  Identification of an ABC transporter required for iron acquisition and virulence in Mycobacterium tuberculosis.

Authors:  G Marcela Rodriguez; Issar Smith
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5.  Mammalian cell-entry proteins encoded by the mce3 operon of Mycobacterium tuberculosis are expressed during natural infection in humans.

Authors:  S Ahmad; S El-Shazly; A S Mustafa; R Al-Attiyah
Journal:  Scand J Immunol       Date:  2004-10       Impact factor: 3.487

6.  Clade-specific virulence patterns of Mycobacterium tuberculosis complex strains in human primary macrophages and aerogenically infected mice.

Authors:  Norbert Reiling; Susanne Homolka; Kerstin Walter; Julius Brandenburg; Lisa Niwinski; Martin Ernst; Christian Herzmann; Christoph Lange; Roland Diel; Stefan Ehlers; Stefan Niemann
Journal:  MBio       Date:  2013-07-30       Impact factor: 7.867

7.  High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms.

Authors:  Susanne Homolka; Michaela Projahn; Silke Feuerriegel; Tanja Ubben; Roland Diel; Ulrich Nübel; Stefan Niemann
Journal:  PLoS One       Date:  2012-07-02       Impact factor: 3.240

8.  Mycobacterium tuberculosis Type II Toxin-Antitoxin Systems: Genetic Polymorphisms and Functional Properties and the Possibility of Their Use for Genotyping.

Authors:  Marina V Zaychikova; Natalia V Zakharevich; Maria O Sagaidak; Nadezhda A Bogolubova; Tatiana G Smirnova; Sofya N Andreevskaya; Elena E Larionova; Maria G Alekseeva; Larisa N Chernousova; Valery N Danilenko
Journal:  PLoS One       Date:  2015-12-14       Impact factor: 3.240

9.  Mechanistic insights into a novel exporter-importer system of Mycobacterium tuberculosis unravel its role in trafficking of iron.

Authors:  Aisha Farhana; Sandeep Kumar; Shailendra S Rathore; Prahlad C Ghosh; Nasreen Z Ehtesham; Anil K Tyagi; Seyed E Hasnain
Journal:  PLoS One       Date:  2008-05-07       Impact factor: 3.240

Review 10.  Multiple toxin-antitoxin systems in Mycobacterium tuberculosis.

Authors:  Ambre Sala; Patricia Bordes; Pierre Genevaux
Journal:  Toxins (Basel)       Date:  2014-03-06       Impact factor: 4.546
  10 in total
  1 in total

1.  A Nonsynonymous SNP Catalog of Mycobacterium tuberculosis Virulence Genes and Its Use for Detecting New Potentially Virulent Sublineages.

Authors:  Natalya E Mikheecheva; Marina V Zaychikova; Alexander V Melerzanov; Valery N Danilenko
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  1 in total

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