Literature DB >> 2775743

Proton NMR assignments and regular backbone structure of bovine pancreatic ribonuclease A in aqueous solution.

A D Robertson1, E O Purisima, M A Eastman, H A Scheraga.   

Abstract

Proton NMR assignments have been made for 121 of the 124 residues of bovine pancreatic ribonuclease A (RNase A). During the first stage of assignment, COSY and relayed COSY data were used to identify 40 amino acid spin systems belonging to alanine, valine, threonine, isoleucine, and serine residues. Approximately 60 other NH-alpha CH-beta CH systems were also identified but not assigned to specific amino acid type. NOESY data then were used to connect sequentially neighboring spin systems; approximately 475 of the possible 700 resonances in RNase A were assigned in this way. Our assignments agree with those for 20 residues assigned previously [Hahn, U., & Rüterjans, H. (1985) Eur. J. Biochem. 152, 481-491]. Additional NOESY correlations were used to identify regular backbone structure elements in RNase A, which are very similar to those observed in X-ray crystallographic studies [Wlodawer, A., Borkakoti, N., Moss, D. S., & Howlin, B. (1986) Acta Crystallogr. B42, 379-387].

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Year:  1989        PMID: 2775743     DOI: 10.1021/bi00440a033

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Native-state hydrogen-exchange studies of a fragment complex can provide structural information about the isolated fragments.

Authors:  G Chakshusmathi; G S Ratnaparkhi; P K Madhu; R Varadarajan
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

2.  Early folding intermediate of ribonuclease A.

Authors:  J B Udgaonkar; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

3.  A simple method to quantitatively measure polypeptide JHNH alpha coupling constants from TOCSY or NOESY spectra.

Authors:  Y Wang; A M Nip; D S Wishart
Journal:  J Biomol NMR       Date:  1997-12       Impact factor: 2.835

4.  The relationship between amide proton chemical shifts and secondary structure in proteins.

Authors:  T Asakura; K Taoka; M Demura; M P Williamson
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Kinetics of hydrogen bond breakage in the process of unfolding of ribonuclease A measured by pulsed hydrogen exchange.

Authors:  T Kiefhaber; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

6.  NMR study of the positions of His-12 and His-119 in the ribonuclease A-uridine vanadate complex.

Authors:  T D Veenstra; L Lee
Journal:  Biophys J       Date:  1994-07       Impact factor: 4.033

7.  Two-phase unfolding pathway of ribonuclease A during denaturation induced by dithiothreitol.

Authors:  Y B Yan; B Jiang; R Q Zhang; H M Zhou
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

8.  3D structure of bovine pancreatic ribonuclease A in aqueous solution: an approach to tertiary structure determination from a small basis of 1H NMR NOE correlations.

Authors:  M Rico; J Santoro; C González; M Bruix; J L Neira; J L Nieto; J Herranz
Journal:  J Biomol NMR       Date:  1991-09       Impact factor: 2.835

9.  Three-dimensional structure of the complexes of ribonuclease A with 2',5'-CpA and 3',5'-d(CpA) in aqueous solution, as obtained by NMR and restrained molecular dynamics.

Authors:  C Toiron; C González; M Bruix; M Rico
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

10.  Structure and stability of the P93G variant of ribonuclease A.

Authors:  L W Schultz; S R Hargraves; T A Klink; R T Raines
Journal:  Protein Sci       Date:  1998-07       Impact factor: 6.725

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