Literature DB >> 27754659

Photoinduced Chemistry in Fluorescent Proteins: Curse or Blessing?

Atanu Acharya1, Alexey M Bogdanov2,3, Bella L Grigorenko4,5, Ksenia B Bravaya6, Alexander V Nemukhin4,5, Konstantin A Lukyanov2,3, Anna I Krylov1.   

Abstract

Photoinduced reactions play an important role in the photocycle of fluorescent proteins from the green fluorescent protein (GFP) family. Among such processes are photoisomerization, photooxidation/photoreduction, breaking and making of covalent bonds, and excited-state proton transfer (ESPT). Many of these transformations are initiated by electron transfer (ET). The quantum yields of these processes vary significantly, from nearly 1 for ESPT to 10-4-10-6 for ET. Importantly, even when quantum yields are relatively small, at the conditions of repeated illumination the overall effect is significant. Depending on the task at hand, fluorescent protein photochemistry is regarded either as an asset facilitating new applications or as a nuisance leading to the loss of optical output. The phenomena arising due to phototransformations include (i) large Stokes shifts, (ii) photoconversions, photoactivation, and photoswitching, (iii) phototoxicity, (iv) blinking, (v) permanent bleaching, and (vi) formation of long-lived intermediates. The focus of this review is on the most recent experimental and theoretical work on photoinduced transformations in fluorescent proteins. We also provide an overview of the photophysics of fluorescent proteins, highlighting the interplay between photochemistry and other channels (fluorescence, radiationless relaxation, and intersystem crossing). The similarities and differences with photochemical processes in other biological systems and in dyes are also discussed.

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Year:  2016        PMID: 27754659     DOI: 10.1021/acs.chemrev.6b00238

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  21 in total

1.  Chromophore reduction plus reversible photobleaching: how the mKate2 "photoconversion" works.

Authors:  Elena A Protasova; Alexander S Mishin; Konstantin A Lukyanov; Eugene G Maksimov; Alexey M Bogdanov
Journal:  Photochem Photobiol Sci       Date:  2021-06-04       Impact factor: 3.982

2.  Super-Resolution Radial Fluctuations (SRRF) Microscopy.

Authors:  Jayme Salsman; Graham Dellaire
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Photoswitchable Fluorescent Proteins: Mechanisms on Ultrafast Timescales.

Authors:  Longteng Tang; Chong Fang
Journal:  Int J Mol Sci       Date:  2022-06-09       Impact factor: 6.208

4.  Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme.

Authors:  Chi-Yun Lin; Matthew G Romei; Irimpan I Mathews; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2022-02-24       Impact factor: 16.383

5.  Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.

Authors:  Matthew G Romei; Chi-Yun Lin; Steven G Boxer
Journal:  J Photochem Photobiol A Chem       Date:  2020-06-30       Impact factor: 4.291

6.  Imaging Intracellular S-Adenosyl Methionine Dynamics in Live Mammalian Cells with a Genetically Encoded Red Fluorescent RNA-Based Sensor.

Authors:  Xing Li; Liuting Mo; Jacob L Litke; Sourav Kumar Dey; Scott R Suter; Samie R Jaffrey
Journal:  J Am Chem Soc       Date:  2020-08-07       Impact factor: 15.419

7.  Electrostatic control of photoisomerization pathways in proteins.

Authors:  Matthew G Romei; Chi-Yun Lin; Irimpan I Mathews; Steven G Boxer
Journal:  Science       Date:  2020-01-03       Impact factor: 47.728

Review 8.  Frontiers in Multiscale Modeling of Photoreceptor Proteins.

Authors:  Maria-Andrea Mroginski; Suliman Adam; Gil S Amoyal; Avishai Barnoy; Ana-Nicoleta Bondar; Veniamin A Borin; Jonathan R Church; Tatiana Domratcheva; Bernd Ensing; Francesca Fanelli; Nicolas Ferré; Ofer Filiba; Laura Pedraza-González; Ronald González; Cristina E González-Espinoza; Rajiv K Kar; Lukas Kemmler; Seung Soo Kim; Jacob Kongsted; Anna I Krylov; Yigal Lahav; Michalis Lazaratos; Qays NasserEddin; Isabelle Navizet; Alexander Nemukhin; Massimo Olivucci; Jógvan Magnus Haugaard Olsen; Alberto Pérez de Alba Ortíz; Elisa Pieri; Aditya G Rao; Young Min Rhee; Niccolò Ricardi; Saumik Sen; Ilia A Solov'yov; Luca De Vico; Tomasz A Wesolowski; Christian Wiebeler; Xuchun Yang; Igor Schapiro
Journal:  Photochem Photobiol       Date:  2021-02-13       Impact factor: 3.521

9.  Synthesis of pH Dependent Pyrazole, Imidazole, and Isoindolone Dipyrrinone Fluorophores using a Claisen-Schmidt Condensation Approach.

Authors:  Nicole Benson; Adam Davis; Zachary R Woydziak
Journal:  J Vis Exp       Date:  2021-06-10       Impact factor: 1.424

10.  DNA mimics of red fluorescent proteins (RFP) based on G-quadruplex-confined synthetic RFP chromophores.

Authors:  Guangfu Feng; Chao Luo; Haibo Yi; Lin Yuan; Bin Lin; Xingyu Luo; Xiaoxiao Hu; Honghui Wang; Chunyang Lei; Zhou Nie; Shouzhuo Yao
Journal:  Nucleic Acids Res       Date:  2017-10-13       Impact factor: 16.971

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