Literature DB >> 27752679

Folding propensity of intrinsically disordered proteins by osmotic stress.

Amanda L Mansouri1, Laura N Grese2, Erica L Rowe2, James C Pino3, S Chakra Chennubhotla4, Arvind Ramanathan3, Hugh M O'Neill5, Valerie Berthelier1, Christopher B Stanley5.   

Abstract

Proteins imparted with intrinsic disorder conduct a range of essential cellular functions. To better understand the folding and hydration properties of intrinsically disordered proteins (IDPs), we used osmotic stress to induce conformational changes in nuclear co-activator binding domain (NCBD) and activator for thyroid hormone and retinoid receptor (ACTR) separate from their mutual binding. Osmotic stress was applied by the addition of small and polymeric osmolytes, where we discovered that water contributions to NCBD folding always exceeded those for ACTR. Both NCBD and ACTR were found to gain α-helical structure with increasing osmotic stress, consistent with their folding upon NCBD/ACTR complex formation. Using small-angle neutron scattering (SANS), we further characterized NCBD structural changes with the osmolyte ethylene glycol. Here a large reduction in overall size initially occurred before substantial secondary structural change. By focusing on folding propensity, and linked hydration changes, we uncover new insights that may be important for how IDP folding contributes to binding.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27752679      PMCID: PMC5363718          DOI: 10.1039/c6mb00512h

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  36 in total

1.  Effects of macromolecular crowding on the intrinsically disordered proteins c-Fos and p27(Kip1).

Authors:  S L Flaugh; K J Lumb
Journal:  Biomacromolecules       Date:  2001       Impact factor: 6.988

2.  Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators.

Authors:  Stephen J Demarest; Maria Martinez-Yamout; John Chung; Hongwu Chen; Wei Xu; H Jane Dyson; Ronald M Evans; Peter E Wright
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

3.  Enthalpically driven peptide stabilization by protective osmolytes.

Authors:  Regina Politi; Daniel Harries
Journal:  Chem Commun (Camb)       Date:  2010-07-26       Impact factor: 6.222

4.  Osmolyte-induced folding of an intrinsically disordered protein: folding mechanism in the absence of ligand.

Authors:  Yu-Chu Chang; Terrence G Oas
Journal:  Biochemistry       Date:  2010-06-29       Impact factor: 3.162

5.  Effects of macromolecular crowding on the collapse of biopolymers.

Authors:  Hongsuk Kang; Philip A Pincus; Changbong Hyeon; D Thirumalai
Journal:  Phys Rev Lett       Date:  2015-02-13       Impact factor: 9.161

Review 6.  Unusual biophysics of intrinsically disordered proteins.

Authors:  Vladimir N Uversky
Journal:  Biochim Biophys Acta       Date:  2012-12-23

7.  Separating chemical and excluded volume interactions of polyethylene glycols with native proteins: Comparison with PEG effects on DNA helix formation.

Authors:  Irina A Shkel; D B Knowles; M Thomas Record
Journal:  Biopolymers       Date:  2015-09       Impact factor: 2.505

8.  Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro.

Authors:  E S Courtenay; M W Capp; C F Anderson; M T Record
Journal:  Biochemistry       Date:  2000-04-18       Impact factor: 3.162

9.  The transition state structure for coupled binding and folding of disordered protein domains.

Authors:  Jakob Dogan; Xin Mu; Åke Engström; Per Jemth
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

Review 10.  A decade and a half of protein intrinsic disorder: biology still waits for physics.

Authors:  Vladimir N Uversky
Journal:  Protein Sci       Date:  2013-04-29       Impact factor: 6.725

View more
  6 in total

1.  Does water stress promote the proteome-wide adjustment of intrinsically disordered proteins in plants?

Authors:  Jesús Alejandro Zamora-Briseño; Sandi Julissa Reyes-Hernández; Luis Carlos Rodríguez Zapata
Journal:  Cell Stress Chaperones       Date:  2018-06-02       Impact factor: 3.667

2.  Revealing the Hidden Sensitivity of Intrinsically Disordered Proteins to their Chemical Environment.

Authors:  David Moses; Feng Yu; Garrett M Ginell; Nora M Shamoon; Patrick S Koenig; Alex S Holehouse; Shahar Sukenik
Journal:  J Phys Chem Lett       Date:  2020-11-16       Impact factor: 6.475

3.  NFAT5, which protects against hypertonicity, is activated by that stress via structuring of its intrinsically disordered domain.

Authors:  Raj Kumar; Jenna F DuMond; Shagufta H Khan; E Brad Thompson; Yi He; Maurice B Burg; Joan D Ferraris
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

4.  Characterization of an Extensive Interface on Vitronectin for Binding to Plasminogen Activator Inhibitor-1: Adoption of Structure in an Intrinsically Disordered Region.

Authors:  Letitia O Puster; Christopher B Stanley; Vladimir N Uversky; Joseph E Curtis; Susan Krueger; Yuzhuo Chu; Cynthia B Peterson
Journal:  Biochemistry       Date:  2019-12-16       Impact factor: 3.162

5.  Metabolic Profile of Oral Squamous Carcinoma Cell Lines Relies on a Higher Demand of Lipid Metabolism in Metastatic Cells.

Authors:  Ana Carolina B Sant'Anna-Silva; Gilson C Santos; Samir P Costa Campos; André Marco Oliveira Gomes; Juan Alberto Pérez-Valencia; Franklin David Rumjanek
Journal:  Front Oncol       Date:  2018-02-02       Impact factor: 6.244

6.  Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations.

Authors:  Utsab R Shrestha; Jeremy C Smith; Loukas Petridis
Journal:  Commun Biol       Date:  2021-02-23
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.