Literature DB >> 27735133

Optimized Tetrazine Derivatives for Rapid Bioorthogonal Decaging in Living Cells.

Xinyuan Fan1,2, Yun Ge1, Feng Lin1, Yi Yang1, Gong Zhang1,2, William Shu Ching Ngai1, Zhi Lin1, Siqi Zheng1, Jie Wang1,2, Jingyi Zhao1,2, Jie Li1, Peng R Chen3,4.   

Abstract

The inverse-electron-demand Diels-Alder (iDA) reaction has recently been repurposed as a bioorthogonal decaging reaction by accelerating the elimination process after an initial cycloaddition between trans-cyclooctene (TCO) and tetrazine (TZ). Herein, we systematically surveyed 3,6-substituted TZ derivatives by using a fluorogenic TCO-coumarin reporter followed by LC-MS analysis, which revealed that the initial iDA cycloaddition step was greatly accelerated by electron-withdrawing groups (EWGs) while the subsequent elimination step was strongly suppressed by EWGs. In addition, smaller substituents facilitated the decaging process. These findings promoted us to design and test unsymmetric TZs bearing an EWG group and a small non-EWG group at the 3- and 6-position, respectively. These TZs showed remarkably enhanced decaging rates, enabling rapid iDA-mediated protein activation in living cells.
© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Diels-Alder reactions; amino acids; decaging; protein activation; protein engineering

Mesh:

Substances:

Year:  2016        PMID: 27735133     DOI: 10.1002/anie.201608009

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  33 in total

1.  Tetrazine Carbon Nanotubes for Pretargeted In Vivo "Click-to-Release" Bioorthogonal Tumour Imaging.

Authors:  He Li; João Conde; Ana Guerreiro; Gonçalo J L Bernardes
Journal:  Angew Chem Int Ed Engl       Date:  2020-08-07       Impact factor: 15.336

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Journal:  ACS Chem Biol       Date:  2019-11-14       Impact factor: 5.100

4.  Constructing New Bioorthogonal Reagents and Reactions.

Authors:  R David Row; Jennifer A Prescher
Journal:  Acc Chem Res       Date:  2018-05-04       Impact factor: 22.384

5.  Spatiotemporally resolved subcellular phosphoproteomics.

Authors:  Yanjun Liu; Ruxin Zeng; Ruixuan Wang; Yicheng Weng; Ruixiang Wang; Peng Zou; Peng R Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-22       Impact factor: 11.205

6.  Stable, Reactive, and Orthogonal Tetrazines: Dispersion Forces Promote the Cycloaddition with Isonitriles.

Authors:  Julian Tu; Dennis Svatunek; Saba Parvez; Albert C Liu; Brian J Levandowski; Hannah J Eckvahl; Randall T Peterson; Kendall N Houk; Raphael M Franzini
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-06       Impact factor: 16.823

7.  Synthetic Sphingolipids with 1,2-Pyridazine Appendages Improve Antiproliferative Activity in Human Cancer Cell Lines.

Authors:  Sylvestre P J T Bachollet; Vito Vece; Alison N McCracken; Brendan T Finicle; Elizabeth Selwan; Nadine Ben Romdhane; Amogha Dahal; Cuauhtemoc Ramirez; Aimee L Edinger; Stephen Hanessian
Journal:  ACS Med Chem Lett       Date:  2020-02-12       Impact factor: 4.632

8.  Approach Matters: The Kinetics of Interfacial Inverse-Electron Demand Diels-Alder Reactions.

Authors:  Rickdeb Sen; Digvijay Gahtory; Jorge Escorihuela; Judith Firet; Sidharam P Pujari; Han Zuilhof
Journal:  Chemistry       Date:  2017-08-23       Impact factor: 5.236

9.  Photochemical syntheses, transformations, and bioorthogonal chemistry of trans-cycloheptene and sila trans-cycloheptene Ag(i) complexes.

Authors:  Yinzhi Fang; Han Zhang; Zhen Huang; Samuel L Scinto; Jeffrey C Yang; Christopher W Am Ende; Olga Dmitrenko; Douglas S Johnson; Joseph M Fox
Journal:  Chem Sci       Date:  2018-01-08       Impact factor: 9.825

10.  Controlled in-cell activation of RNA therapeutics using bond-cleaving bio-orthogonal chemistry.

Authors:  Irfan Khan; Leah M Seebald; Neil M Robertson; Mehmet V Yigit; Maksim Royzen
Journal:  Chem Sci       Date:  2017-06-14       Impact factor: 9.825

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