Literature DB >> 27726770

Paleomicrobiology: a Snapshot of Ancient Microbes and Approaches to Forensic Microbiology.

Jessica I Rivera-Perez1, Tasha M Santiago-Rodriguez2, Gary A Toranzos1.   

Abstract

Paleomicrobiology, or the study of ancient microorganisms, has raised both fascination and skepticism for many years. While paleomicrobiology is not a recent field, the application of emerging techniques, such as DNA sequencing, is proving essential and has provided novel information regarding the evolution of viruses, antibiotic resistance, saprophytes, and pathogens, as well as ancient health and disease status, cultural customs, ethnic diets, and historical events. In this review, we highlight the importance of studying ancient microbial DNA, its contributions to current knowledge, and the role that forensic paleomicrobiology has played in deciphering historical enigmas. We also discuss the emerging techniques used to study the microbial composition of ancient samples as well as major concerns that accompany ancient DNA analyses.

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Year:  2016        PMID: 27726770      PMCID: PMC5287379          DOI: 10.1128/microbiolspec.EMF-0006-2015

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  144 in total

1.  Ancient DNA analysis of human populations.

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Journal:  Am J Phys Anthropol       Date:  2000-01       Impact factor: 2.868

2.  A phenol-chloroform protocol for extracting DNA from ancient samples.

Authors:  Ross Barnett; Greger Larson
Journal:  Methods Mol Biol       Date:  2012

Review 3.  Geologically ancient DNA: fact or artefact?

Authors:  Martin B Hebsgaard; Matthew J Phillips; Eske Willerslev
Journal:  Trends Microbiol       Date:  2005-05       Impact factor: 17.079

4.  Bacterial community in ancient Siberian permafrost as characterized by culture and culture-independent methods.

Authors:  Tatiana A Vishnivetskaya; Maya A Petrova; John Urbance; Monica Ponder; Craig L Moyer; David A Gilichinsky; James M Tiedje
Journal:  Astrobiology       Date:  2006-06       Impact factor: 4.335

Review 5.  Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities.

Authors:  Ursel M E Schütte; Zaid Abdo; Stephen J Bent; Conrad Shyu; Christopher J Williams; Jacob D Pierson; Larry J Forney
Journal:  Appl Microbiol Biotechnol       Date:  2008-07-22       Impact factor: 4.813

6.  The retrieval of ancient human DNA sequences.

Authors:  O Handt; M Krings; R H Ward; S Pääbo
Journal:  Am J Hum Genet       Date:  1996-08       Impact factor: 11.025

7.  [Reactivation of dormant and nonculturable bacterial forms from paleosoils and subsoil permafrost].

Authors:  N A Kriazhevskikh; E V Demkina; N A Manucharova; V A Soina; V F Gal'chenko; G I El'-Registan
Journal:  Mikrobiologiia       Date:  2012 Jul-Aug

8.  The structure of a resuscitation-promoting factor domain from Mycobacterium tuberculosis shows homology to lysozymes.

Authors:  Martin Cohen-Gonsaud; Philippe Barthe; Claire Bagnéris; Brian Henderson; John Ward; Christian Roumestand; Nicholas H Keep
Journal:  Nat Struct Mol Biol       Date:  2005-02-20       Impact factor: 15.369

9.  Tuberculosis: a global emergency.

Authors:  D Rock
Journal:  Work       Date:  1997

10.  Distinct clones of Yersinia pestis caused the black death.

Authors:  Stephanie Haensch; Raffaella Bianucci; Michel Signoli; Minoarisoa Rajerison; Michael Schultz; Sacha Kacki; Marco Vermunt; Darlene A Weston; Derek Hurst; Mark Achtman; Elisabeth Carniel; Barbara Bramanti
Journal:  PLoS Pathog       Date:  2010-10-07       Impact factor: 6.823

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  4 in total

Review 1.  The paleopathological evidence on the origins of human tuberculosis: a review.

Authors:  I Buzic; V Giuffra
Journal:  J Prev Med Hyg       Date:  2020-04-30

2.  Hybrid Capture-Based Next Generation Sequencing and Its Application to Human Infectious Diseases.

Authors:  Maxime Gaudin; Christelle Desnues
Journal:  Front Microbiol       Date:  2018-11-27       Impact factor: 5.640

3.  Comparative Genomics Analysis Demonstrated a Link Between Staphylococci Isolated From Different Sources: A Possible Public Health Risk.

Authors:  Rory Cave; Raju Misra; Jiazhen Chen; Shiyong Wang; Hermine V Mkrtchyan
Journal:  Front Microbiol       Date:  2021-02-25       Impact factor: 5.640

Review 4.  The past, present and future of ancient bacterial DNA.

Authors:  Nicolas Arning; Daniel J Wilson
Journal:  Microb Genom       Date:  2020-07
  4 in total

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