Literature DB >> 27723719

Mitotic binding of Esrrb marks key regulatory regions of the pluripotency network.

Nicola Festuccia1, Agnès Dubois1, Sandrine Vandormael-Pournin2, Elena Gallego Tejeda1, Adrien Mouren1, Sylvain Bessonnard2, Florian Mueller3, Caroline Proux4, Michel Cohen-Tannoudji2, Pablo Navarro1.   

Abstract

Pluripotent mouse embryonic stem cells maintain their identity throughout virtually infinite cell divisions. This phenomenon, referred to as self-renewal, depends on a network of sequence-specific transcription factors (TFs) and requires daughter cells to accurately reproduce the gene expression pattern of the mother. However, dramatic chromosomal changes take place in mitosis, generally leading to the eviction of TFs from chromatin. Here, we report that Esrrb, a major pluripotency TF, remains bound to key regulatory regions during mitosis. We show that mitotic Esrrb binding is highly dynamic, driven by specific recognition of its DNA-binding motif and is associated with early transcriptional activation of target genes after completion of mitosis. These results indicate that Esrrb may act as a mitotic bookmarking factor, opening another perspective to molecularly understand the role of sequence-specific TFs in the epigenetic control of self-renewal, pluripotency and genome reprogramming.

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Year:  2016        PMID: 27723719     DOI: 10.1038/ncb3418

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  60 in total

1.  GeneProf: analysis of high-throughput sequencing experiments.

Authors:  Florian Halbritter; Harsh J Vaidya; Simon R Tomlinson
Journal:  Nat Methods       Date:  2011-12-28       Impact factor: 28.547

2.  Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b.

Authors:  Akiko Tsumura; Tomohiro Hayakawa; Yuichi Kumaki; Shin-ichiro Takebayashi; Morito Sakaue; Chisa Matsuoka; Kunitada Shimotohno; Fuyuki Ishikawa; En Li; Hiroki R Ueda; Jun-ichi Nakayama; Masaki Okano
Journal:  Genes Cells       Date:  2006-07       Impact factor: 1.891

3.  Mitotic occupancy and lineage-specific transcriptional control of rRNA genes by Runx2.

Authors:  Daniel W Young; Mohammad Q Hassan; Jitesh Pratap; Mario Galindo; Sayyed K Zaidi; Suk-hee Lee; Xiaoqing Yang; Ronglin Xie; Amjad Javed; Jean M Underwood; Paul Furcinitti; Anthony N Imbalzano; Sheldon Penman; Jeffrey A Nickerson; Martin A Montecino; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  Nature       Date:  2007-01-25       Impact factor: 49.962

4.  Marking of active genes on mitotic chromosomes.

Authors:  E F Michelotti; S Sanford; D Levens
Journal:  Nature       Date:  1997-08-28       Impact factor: 49.962

5.  Genome reactivation after the silence in mitosis: recapitulating mechanisms of development?

Authors:  Kenneth S Zaret
Journal:  Dev Cell       Date:  2014-04-28       Impact factor: 12.270

6.  Inhibition of pluripotential embryonic stem cell differentiation by purified polypeptides.

Authors:  A G Smith; J K Heath; D D Donaldson; G G Wong; J Moreau; M Stahl; D Rogers
Journal:  Nature       Date:  1988-12-15       Impact factor: 49.962

7.  A map of the cis-regulatory sequences in the mouse genome.

Authors:  Yin Shen; Feng Yue; David F McCleary; Zhen Ye; Lee Edsall; Samantha Kuan; Ulrich Wagner; Jesse Dixon; Leonard Lee; Victor V Lobanenkov; Bing Ren
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962

8.  Polycomb complexes act redundantly to repress genomic repeats and genes.

Authors:  Martin Leeb; Diego Pasini; Maria Novatchkova; Markus Jaritz; Kristian Helin; Anton Wutz
Journal:  Genes Dev       Date:  2010-02-01       Impact factor: 11.361

9.  Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin.

Authors:  Bernhard Lehnertz; Yoshihide Ueda; Alwin A H A Derijck; Ulrich Braunschweig; Laura Perez-Burgos; Stefan Kubicek; Taiping Chen; En Li; Thomas Jenuwein; Antoine H F M Peters
Journal:  Curr Biol       Date:  2003-07-15       Impact factor: 10.834

10.  RSAT 2015: Regulatory Sequence Analysis Tools.

Authors:  Alejandra Medina-Rivera; Matthieu Defrance; Olivier Sand; Carl Herrmann; Jaime A Castro-Mondragon; Jeremy Delerce; Sébastien Jaeger; Christophe Blanchet; Pierre Vincens; Christophe Caron; Daniel M Staines; Bruno Contreras-Moreira; Marie Artufel; Lucie Charbonnier-Khamvongsa; Céline Hernandez; Denis Thieffry; Morgane Thomas-Chollier; Jacques van Helden
Journal:  Nucleic Acids Res       Date:  2015-04-22       Impact factor: 16.971

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  50 in total

Review 1.  Cycling through developmental decisions: how cell cycle dynamics control pluripotency, differentiation and reprogramming.

Authors:  Abdenour Soufi; Stephen Dalton
Journal:  Development       Date:  2016-12-01       Impact factor: 6.868

Review 2.  A new bookmark of the mitotic genome in embryonic stem cells.

Authors:  Chris C-S Hsiung; Gerd A Blobel
Journal:  Nat Cell Biol       Date:  2016-10-27       Impact factor: 28.824

3.  Nuclear localization signal region in nuclear receptor PXR governs the receptor association with mitotic chromatin.

Authors:  Manjul Rana; Amit K Dash; Kalaiarasan Ponnusamy; Rakesh K Tyagi
Journal:  Chromosome Res       Date:  2018-07-15       Impact factor: 5.239

4.  Mitotic transcription and waves of gene reactivation during mitotic exit.

Authors:  Katherine C Palozola; Greg Donahue; Hong Liu; Gregory R Grant; Justin S Becker; Allison Cote; Hongtao Yu; Arjun Raj; Kenneth S Zaret
Journal:  Science       Date:  2017-09-14       Impact factor: 47.728

Review 5.  Pioneer transcription factors shape the epigenetic landscape.

Authors:  Alexandre Mayran; Jacques Drouin
Journal:  J Biol Chem       Date:  2018-03-05       Impact factor: 5.157

Review 6.  Role of cyclins and cyclin-dependent kinases in pluripotent stem cells and their potential as a therapeutic target.

Authors:  Siwanon Jirawatnotai; Stephen Dalton; Methichit Wattanapanitch
Journal:  Semin Cell Dev Biol       Date:  2020-05-14       Impact factor: 7.727

Review 7.  Mitotic Gene Bookmarking: An Epigenetic Mechanism for Coordination of Lineage Commitment, Cell Identity and Cell Growth.

Authors:  Sayyed K Zaidi; Jane B Lian; Andre van Wijnen; Janet L Stein; Gary S Stein
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

8.  Comparative transcriptomic analysis identifies evolutionarily conserved gene products in the vertebrate renal distal convoluted tubule.

Authors:  Yuya Sugano; Chiara Cianciolo Cosentino; Dominique Loffing-Cueni; Stephan C F Neuhauss; Johannes Loffing
Journal:  Pflugers Arch       Date:  2017-06-27       Impact factor: 3.657

9.  Widespread Mitotic Bookmarking by Histone Marks and Transcription Factors in Pluripotent Stem Cells.

Authors:  Yiyuan Liu; Bobbie Pelham-Webb; Dafne Campigli Di Giammartino; Jiexi Li; Daleum Kim; Katsuhiro Kita; Nestor Saiz; Vidur Garg; Ashley Doane; Paraskevi Giannakakou; Anna-Katerina Hadjantonakis; Olivier Elemento; Effie Apostolou
Journal:  Cell Rep       Date:  2017-05-16       Impact factor: 9.423

Review 10.  Nuclear organization mediates cancer-compromised genetic and epigenetic control.

Authors:  Sayyed K Zaidi; Andrew J Fritz; Kirsten M Tracy; Jonathan A Gordon; Coralee E Tye; Joseph Boyd; Andre J Van Wijnen; Jeffrey A Nickerson; Antony N Imbalzano; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  Adv Biol Regul       Date:  2018-05-09
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