Literature DB >> 27718551

Paired Design of dCas9 as a Systematic Platform for the Detection of Featured Nucleic Acid Sequences in Pathogenic Strains.

Yihao Zhang1,2, Long Qian3, Weijia Wei1,4,5, Yu Wang1, Beining Wang1, Pingping Lin1, Wenchao Liu1, Luze Xu1, Xiang Li1, Dongming Liu1, Sida Cheng1, Jiaofeng Li1, Yixuan Ye1, Hang Li1, Xiaohan Zhang1, Yiming Dong2, Xuejin Zhao4, Cuihua Liu6, Haoqian M Zhang2, Qi Ouyang2,7, Chunbo Lou4,5.   

Abstract

We developed an in vitro DNA detection system using a pair of dCas9 proteins linked to split halves of luciferase. Luminescence was induced upon colocalization of the reporter pair to a ∼44 bp target sequence defined by sgRNAs. We used the system to detect Mycobacterium tuberculosis DNA with high specificity and sensitivity. The reprogrammability of dCas9 was further leveraged in an array design that accesses sequence information across the entire genome.

Entities:  

Keywords:  DNA detection; dCas9; in vitro pathogenic detection; paired design; split luciferase; tuberculosis

Mesh:

Substances:

Year:  2016        PMID: 27718551     DOI: 10.1021/acssynbio.6b00215

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  19 in total

1.  Diversification of the CRISPR Toolbox: Applications of CRISPR-Cas Systems Beyond Genome Editing.

Authors:  Sarah Balderston; Gabrielle Clouse; Juan-José Ripoll; Grace K Pratt; Giedrius Gasiunas; Jens-Ole Bock; Eric Paul Bennett; Kiana Aran
Journal:  CRISPR J       Date:  2021-06

Review 2.  CRISPR/cas systems redefine nucleic acid detection: Principles and methods.

Authors:  Meng Wang; Rui Zhang; Jinming Li
Journal:  Biosens Bioelectron       Date:  2020-07-08       Impact factor: 10.618

3.  Futuristic CRISPR-based biosensing in the cloud and internet of things era: an overview.

Authors:  Abdullahi Umar Ibrahim; Fadi Al-Turjman; Zubaida Sa'id; Mehmet Ozsoz
Journal:  Multimed Tools Appl       Date:  2020-06-08       Impact factor: 2.577

Review 4.  Dead Cas Systems: Types, Principles, and Applications.

Authors:  Sergey Brezgin; Anastasiya Kostyusheva; Dmitry Kostyushev; Vladimir Chulanov
Journal:  Int J Mol Sci       Date:  2019-11-30       Impact factor: 5.923

Review 5.  Next-generation pathogen diagnosis with CRISPR/Cas-based detection methods.

Authors:  Xinjie Wang; Xiaoyun Shang; Xingxu Huang
Journal:  Emerg Microbes Infect       Date:  2020-12       Impact factor: 7.163

Review 6.  CRISPR-Cas systems for diagnosing infectious diseases.

Authors:  Anastasiya Kostyusheva; Sergey Brezgin; Yurii Babin; Irina Vasilyeva; Dieter Glebe; Dmitry Kostyushev; Vladimir Chulanov
Journal:  Methods       Date:  2021-04-09       Impact factor: 4.647

Review 7.  CRISPR-Cas-Led Revolution in Diagnosis and Management of Emerging Plant Viruses: New Avenues Toward Food and Nutritional Security.

Authors:  Susheel Kumar Sharma; Om Prakash Gupta; Neeta Pathaw; Devender Sharma; Albert Maibam; Parul Sharma; Jyotsana Sanasam; Suhas Gorakh Karkute; Sandeep Kumar; Bijoya Bhattacharjee
Journal:  Front Nutr       Date:  2021-12-16

Review 8.  Multiplexed CRISPR technologies for gene editing and transcriptional regulation.

Authors:  Alicia E Graham; Lucie Studená; Nicholas S McCarty; Rodrigo Ledesma-Amaro
Journal:  Nat Commun       Date:  2020-03-09       Impact factor: 14.919

9.  CRISPR/Cas9-Based Lateral Flow and Fluorescence Diagnostics.

Authors:  Mark J Osborn; Akshay Bhardwaj; Samuel P Bingea; Friederike Knipping; Colby J Feser; Christopher J Lees; Daniel P Collins; Clifford J Steer; Bruce R Blazar; Jakub Tolar
Journal:  Bioengineering (Basel)       Date:  2021-02-12

Review 10.  Programmable Biosensors Based on RNA-Guided CRISPR/Cas Endonuclease.

Authors:  Xiaolong Liu; Mubashir Hussain; Jianguo Dai; Yonghong Li; Lijun Zhang; Jian Yang; Zeeshan Ali; Nongyue He; Yongjun Tang
Journal:  Biol Proced Online       Date:  2022-01-23       Impact factor: 3.244

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