Literature DB >> 34152221

Diversification of the CRISPR Toolbox: Applications of CRISPR-Cas Systems Beyond Genome Editing.

Sarah Balderston1,2, Gabrielle Clouse1, Juan-José Ripoll2, Grace K Pratt1, Giedrius Gasiunas3,4, Jens-Ole Bock5, Eric Paul Bennett3,6, Kiana Aran1,2.   

Abstract

The discovery of CRISPR has revolutionized the field of genome engineering, but the potential of this technology is far from reaching its limits. In this review, we explore the broad range of applications of CRISPR technology to highlight the rapid expansion of the field beyond gene editing alone. It has been demonstrated that CRISPR technology can control gene expression, spatiotemporally image the genome in vivo, and detect specific nucleic acid sequences for diagnostics. In addition, new technologies are under development to improve CRISPR quality controls for gene editing, thereby improving the reliability of these technologies for therapeutics and beyond. These are just some of the many CRISPR tools that have been developed in recent years, and the toolbox continues to diversify.

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Year:  2021        PMID: 34152221      PMCID: PMC8418451          DOI: 10.1089/crispr.2020.0137

Source DB:  PubMed          Journal:  CRISPR J        ISSN: 2573-1599


  139 in total

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Authors:  W Herr
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1998

Review 2.  Small RNAs - Big Players in Plant-Microbe Interactions.

Authors:  Chien-Yu Huang; Huan Wang; Po Hu; Rachael Hamby; Hailing Jin
Journal:  Cell Host Microbe       Date:  2019-08-14       Impact factor: 21.023

3.  Programmable Inhibition and Detection of RNA Viruses Using Cas13.

Authors:  Catherine A Freije; Cameron Myhrvold; Chloe K Boehm; Aaron E Lin; Nicole L Welch; Amber Carter; Hayden C Metsky; Cynthia Y Luo; Omar O Abudayyeh; Jonathan S Gootenberg; Nathan L Yozwiak; Feng Zhang; Pardis C Sabeti
Journal:  Mol Cell       Date:  2019-10-10       Impact factor: 17.970

4.  Detection of unamplified target genes via CRISPR-Cas9 immobilized on a graphene field-effect transistor.

Authors:  Reza Hajian; Sarah Balderston; Thanhtra Tran; Tara deBoer; Jessy Etienne; Mandeep Sandhu; Noreen A Wauford; Jing-Yi Chung; Jolie Nokes; Mitre Athaiya; Jacobo Paredes; Regis Peytavi; Brett Goldsmith; Niren Murthy; Irina M Conboy; Kiana Aran
Journal:  Nat Biomed Eng       Date:  2019-03-25       Impact factor: 25.671

Review 5.  Editing the epigenome: technologies for programmable transcription and epigenetic modulation.

Authors:  Pratiksha I Thakore; Joshua B Black; Isaac B Hilton; Charles A Gersbach
Journal:  Nat Methods       Date:  2016-02       Impact factor: 28.547

6.  Live cell imaging of genomic loci using dCas9-SunTag system and a bright fluorescent protein.

Authors:  Huiying Ye; Zhili Rong; Ying Lin
Journal:  Protein Cell       Date:  2017-11       Impact factor: 14.870

7.  Engineered Cpf1 variants with altered PAM specificities.

Authors:  Linyi Gao; David B T Cox; Winston X Yan; John C Manteiga; Martin W Schneider; Takashi Yamano; Hiroshi Nishimasu; Osamu Nureki; Nicola Crosetto; Feng Zhang
Journal:  Nat Biotechnol       Date:  2017-06-05       Impact factor: 54.908

8.  RNA-guided gene activation by CRISPR-Cas9-based transcription factors.

Authors:  Pablo Perez-Pinera; D Dewran Kocak; Christopher M Vockley; Andrew F Adler; Ami M Kabadi; Lauren R Polstein; Pratiksha I Thakore; Katherine A Glass; David G Ousterout; Kam W Leong; Farshid Guilak; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

9.  Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins.

Authors:  Morgan L Maeder; James F Angstman; Marcy E Richardson; Samantha J Linder; Vincent M Cascio; Shengdar Q Tsai; Quan H Ho; Jeffry D Sander; Deepak Reyon; Bradley E Bernstein; Joseph F Costello; Miles F Wilkinson; J Keith Joung
Journal:  Nat Biotechnol       Date:  2013-10-09       Impact factor: 54.908

10.  Deployable CRISPR-Cas13a diagnostic tools to detect and report Ebola and Lassa virus cases in real-time.

Authors:  Kayla G Barnes; Anna E Lachenauer; Adam Nitido; Sameed Siddiqui; Robin Gross; Brett Beitzel; Katherine J Siddle; Catherine A Freije; Bonnie Dighero-Kemp; Samar B Mehta; Amber Carter; Jessica Uwanibe; Fehintola Ajogbasile; Testimony Olumade; Ikponmwosa Odia; John Demby Sandi; Mambu Momoh; Hayden C Metsky; Chloe K Boehm; Aaron E Lin; Molly Kemball; Daniel J Park; Luis Branco; Matt Boisen; Brian Sullivan; Mihret F Amare; Abdulwasiu B Tiamiyu; Zahra F Parker; Michael Iroezindu; Donald S Grant; Kayvon Modjarrad; Cameron Myhrvold; Robert F Garry; Gustavo Palacios; Lisa E Hensley; Stephen F Schaffner; Christian T Happi; Andres Colubri; Pardis C Sabeti
Journal:  Nat Commun       Date:  2020-08-17       Impact factor: 14.919

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  2 in total

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Authors:  Miguel Angel Villalobos-López; Analilia Arroyo-Becerra; Anareli Quintero-Jiménez; Gabriel Iturriaga
Journal:  Int J Mol Sci       Date:  2022-10-10       Impact factor: 6.208

Review 2.  Technologies Enabling Single-Molecule Super-Resolution Imaging of mRNA.

Authors:  Mark Tingey; Steven J Schnell; Wenlan Yu; Jason Saredy; Samuel Junod; Dhrumil Patel; Abdullah A Alkurdi; Weidong Yang
Journal:  Cells       Date:  2022-09-30       Impact factor: 7.666

  2 in total

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