Literature DB >> 27715448

Membrane orientation dynamics of lipid-modified small GTPases.

Priyanka Prakash1, Alemayehu A Gorfe1.   

Abstract

Lipid-modified GTPases in the Ras superfamily that mediate a variety of cell signaling processes were thought to be passively anchored to membranes. However, an increasing number of recent studies are finding that membrane binding of these proteins is hardly a passive process, and it involves the soluble catalytic domain as well as the lipid anchor. The catalytic domain adopts multiple orientations on the membrane surface due to internal fluctuations that are modulated by activation status and mutations. Distinct orientation preferences among small GTPases likely lead to differential signaling outcomes, as downstream effectors can sense different orientations. We review recent studies behind this important conclusion.

Entities:  

Keywords:  Ras; dynamics; membrane orientation; protein-membrane interaction

Mesh:

Substances:

Year:  2016        PMID: 27715448      PMCID: PMC5584734          DOI: 10.1080/21541248.2016.1211067

Source DB:  PubMed          Journal:  Small GTPases        ISSN: 2154-1248


  71 in total

Review 1.  Post-translational modifications and regulation of the RAS superfamily of GTPases as anticancer targets.

Authors:  Panagiotis A Konstantinopoulos; Michalis V Karamouzis; Athanasios G Papavassiliou
Journal:  Nat Rev Drug Discov       Date:  2007-07       Impact factor: 84.694

Review 2.  Membrane recognition by phospholipid-binding domains.

Authors:  Mark A Lemmon
Journal:  Nat Rev Mol Cell Biol       Date:  2008-02       Impact factor: 94.444

Review 3.  Signaling from the living plasma membrane.

Authors:  Hernán E Grecco; Malte Schmick; Philippe I H Bastiaens
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

Review 4.  Drugging the undruggable RAS: Mission possible?

Authors:  Adrienne D Cox; Stephen W Fesik; Alec C Kimmelman; Ji Luo; Channing J Der
Journal:  Nat Rev Drug Discov       Date:  2014-10-17       Impact factor: 84.694

5.  The role of G-domain orientation and nucleotide state on the Ras isoform-specific membrane interaction.

Authors:  Shobhna Kapoor; Katrin Weise; Mirko Erlkamp; Gemma Triola; Herbert Waldmann; Roland Winter
Journal:  Eur Biophys J       Date:  2012-08-01       Impact factor: 1.733

6.  Deciphering the deformation modes associated with function retention and specialization in members of the Ras superfamily.

Authors:  Francesco Raimondi; Modesto Orozco; Francesca Fanelli
Journal:  Structure       Date:  2010-03-10       Impact factor: 5.006

7.  All ras proteins are polyisoprenylated but only some are palmitoylated.

Authors:  J F Hancock; A I Magee; J E Childs; C J Marshall
Journal:  Cell       Date:  1989-06-30       Impact factor: 41.582

8.  RAN GTPase and Osteopontin in Pancreatic Cancer.

Authors:  Shivam Saxena; Ankit Gandhi; Pei-Wen Lim; Daniel Relles; Konrad Sarosiek; Christopher Kang; Galina Chipitsyna; Jocelyn Sendecki; Charles J Yeo; Hwyda A Arafat
Journal:  Pancreat Disord Ther       Date:  2013-04-01

Review 9.  The Ras protein superfamily: evolutionary tree and role of conserved amino acids.

Authors:  Ana Maria Rojas; Gloria Fuentes; Antonio Rausell; Alfonso Valencia
Journal:  J Cell Biol       Date:  2012-01-23       Impact factor: 10.539

10.  Galectin-1 dimers can scaffold Raf-effectors to increase H-ras nanoclustering.

Authors:  Olga Blaževitš; Yonatan G Mideksa; Maja Šolman; Alessio Ligabue; Nicholas Ariotti; Hossein Nakhaeizadeh; Eyad K Fansa; Anastassios C Papageorgiou; Alfred Wittinghofer; Mohammad R Ahmadian; Daniel Abankwa
Journal:  Sci Rep       Date:  2016-04-18       Impact factor: 4.379

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  22 in total

1.  Distinct dynamics and interaction patterns in H- and K-Ras oncogenic P-loop mutants.

Authors:  Abdallah Sayyed-Ahmad; Priyanka Prakash; Alemayehu A Gorfe
Journal:  Proteins       Date:  2017-05-31

2.  Dynamics of Membrane-Bound G12V-KRAS from Simulations and Single-Molecule FRET in Native Nanodiscs.

Authors:  Priyanka Prakash; Douglas Litwin; Hong Liang; Suparna Sarkar-Banerjee; Drew Dolino; Yong Zhou; John F Hancock; Vasanthi Jayaraman; Alemayehu A Gorfe
Journal:  Biophys J       Date:  2018-12-20       Impact factor: 4.033

Review 3.  RAS Proteins and Their Regulators in Human Disease.

Authors:  Dhirendra K Simanshu; Dwight V Nissley; Frank McCormick
Journal:  Cell       Date:  2017-06-29       Impact factor: 41.582

4.  The Plasma Membrane as a Competitive Inhibitor and Positive Allosteric Modulator of KRas4B Signaling.

Authors:  Chris Neale; Angel E García
Journal:  Biophys J       Date:  2020-01-22       Impact factor: 4.033

5.  Probing the Conformational and Energy Landscapes of KRAS Membrane Orientation.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  J Phys Chem B       Date:  2019-10-09       Impact factor: 2.991

6.  Remodeling of the interdomain allosteric linker upon membrane binding of CCTα pulls its active site close to the membrane surface.

Authors:  Daniel G Knowles; Jaeyong Lee; Svetla G Taneva; Rosemary B Cornell
Journal:  J Biol Chem       Date:  2019-09-04       Impact factor: 5.157

7.  Computational Modeling Reveals that Signaling Lipids Modulate the Orientation of K-Ras4A at the Membrane Reflecting Protein Topology.

Authors:  Zhen-Lu Li; Matthias Buck
Journal:  Structure       Date:  2017-03-09       Impact factor: 5.006

8.  K-Ras G-domain binding with signaling lipid phosphatidylinositol (4,5)-phosphate (PIP2): membrane association, protein orientation, and function.

Authors:  Shufen Cao; Stacey Chung; SoonJeung Kim; Zhenlu Li; Danny Manor; Matthias Buck
Journal:  J Biol Chem       Date:  2019-02-21       Impact factor: 5.157

Review 9.  A regulatory role of membrane by direct modulation of the catalytic kinase domain.

Authors:  Priyanka Prakash
Journal:  Small GTPases       Date:  2020-07-14

10.  Molecular Dynamics Simulation of Lipid-Modified Signaling Proteins.

Authors:  Vinay V Nair; Alemayehu A Gorfe
Journal:  Methods Mol Biol       Date:  2021
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