Literature DB >> 27714495

Molecular and biological properties of an endornavirus infecting winged bean (Psophocarpus tetragonolobus).

Ryo Okada1, Eri Kiyota1, Hiromitsu Moriyama1, Toshiyuki Fukuhara1,2, Rodrigo A Valverde3.   

Abstract

A double-stranded RNA (dsRNA) of approximately 15 kbp was isolated from asymptomatic winged bean (Psophocarpus tetragonolobus) plants. The size of the dsRNA, together with results of RT-PCR testing, suggested that it was the replicative form of a plant endornavirus. Cloning, sequencing, and sequence analyses confirmed the endornavirus nature of the dsRNA. Conserved motifs typical for endornaviruses were identified and their amino acid sequences compared with those of selected endornaviruses. Phylogenetic analyses revealed a close relationship with Bell pepper endornavirus, Phaseolus vulgaris endornavirus 2, and Hot pepper endornavirus. The dsRNA was present in most P. tetragonolobus genotypes tested. The virus was provisionally named Winged bean endornavirus 1 (WBEV-1).

Entities:  

Keywords:  Endornaviridae; Legume crop; Winged bean; dsRNA

Mesh:

Substances:

Year:  2016        PMID: 27714495     DOI: 10.1007/s11262-016-1398-7

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  13 in total

1.  Complete genome sequence of the first endornavirus from the ascocarp of the ectomycorrhizal fungus Tuber aestivum Vittad.

Authors:  Benjamin Stielow; Hans-Peter Klenk; Wulf Menzel
Journal:  Arch Virol       Date:  2010-12-12       Impact factor: 2.574

2.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

3.  Molecular characterization of two evolutionarily distinct endornaviruses co-infecting common bean (Phaseolus vulgaris).

Authors:  Ryo Okada; Chee Keat Yong; Rodrigo A Valverde; Sead Sabanadzovic; Nanako Aoki; Shunsuke Hotate; Eri Kiyota; Hiromitsu Moriyama; Toshiyuki Fukuhara
Journal:  J Gen Virol       Date:  2012-09-26       Impact factor: 3.891

4.  Nucleotide sequence, genetic organization and expression strategy of the double-stranded RNA associated with the '447' cytoplasmic male sterility trait in Vicia faba.

Authors:  P Pfeiffer
Journal:  J Gen Virol       Date:  1998-10       Impact factor: 3.891

5.  Complete genome sequence of a double-stranded RNA virus from avocado.

Authors:  Francisco Villanueva; Sead Sabanadzovic; Rodrigo A Valverde; Jesús Navas-Castillo
Journal:  J Virol       Date:  2012-01       Impact factor: 5.103

6.  Bell pepper endornavirus: molecular and biological properties, and occurrence in the genus Capsicum.

Authors:  Ryo Okada; Eri Kiyota; Sead Sabanadzovic; Hiromitsu Moriyama; Toshiyuki Fukuhara; Prasenjit Saha; Marilyn J Roossinck; Ake Severin; Rodrigo A Valverde
Journal:  J Gen Virol       Date:  2011-07-20       Impact factor: 3.891

7.  Putative replication intermediates in endornavirus, a novel genus of plant dsRNA viruses.

Authors:  Hideki Horiuchi; Toshiyuki Fukuhara
Journal:  Virus Genes       Date:  2004-12       Impact factor: 2.332

8.  Identification of a short viral transcript in Leishmania RNA virus-infected cells.

Authors:  I K Chung; T C Armstrong; J L Patterson
Journal:  Virology       Date:  1994-02       Impact factor: 3.616

9.  Complete genomic sequence of barley (Hordeum vulgare) endornavirus (HvEV) determined by next-generation sequencing.

Authors:  Thierry Candresse; Armelle Marais; Roberto Sorrentino; Chantal Faure; Sébastien Theil; Valérie Cadot; Mathieu Rolland; Julie Villemot; Frank Rabenstein
Journal:  Arch Virol       Date:  2015-12-14       Impact factor: 2.574

10.  The short transcript of Leishmania RNA virus is generated by RNA cleavage.

Authors:  K J MacBeth; J L Patterson
Journal:  J Virol       Date:  1995-06       Impact factor: 5.103

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  3 in total

Review 1.  A Review on Current Status and Future Prospects of Winged Bean (Psophocarpus tetragonolobus) in Tropical Agriculture.

Authors:  Patrush Lepcha; Ashley N Egan; Jeff J Doyle; N Sathyanarayana
Journal:  Plant Foods Hum Nutr       Date:  2017-09       Impact factor: 3.921

2.  Complete nucleotide sequence of an alphaendornavirus isolated from common buckwheat (Fagopyrum esculentum).

Authors:  Ryo Okada; Hiromitsu Moriyama; Takashi Ogawara; Heather Cizek; Rodrigo A Valverde
Journal:  Arch Virol       Date:  2021-10-04       Impact factor: 2.574

Review 3.  Viruses Infecting the Plant Pathogenic Fungus Rhizoctonia solani.

Authors:  Assane Hamidou Abdoulaye; Mohamed Frahat Foda; Ioly Kotta-Loizou
Journal:  Viruses       Date:  2019-11-30       Impact factor: 5.048

  3 in total

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