| Literature DB >> 27709689 |
Russell W Driver1, Timothy D W Claridge1, Steve Scheiner2, Martin D Smith3.
Abstract
The precise role of non-conventional hydrogen bonds such as the C-H⋅⋅⋅O interaction in influencing the conformation of small molecules remains unresolved. Here we survey a series of β-turn mimetics using X-ray crystallography and NMR spectroscopy in conjunction with quantum calculation, and conclude that favourable torsional and electronic effectsEntities:
Keywords: NMR spectroscopy; crystallography; density functional calculations; foldamers; hydrogen bonds
Year: 2016 PMID: 27709689 PMCID: PMC5113693 DOI: 10.1002/chem.201602905
Source DB: PubMed Journal: Chemistry ISSN: 0947-6539 Impact factor: 5.236
Figure 1Strategy to probe torsional and electronic control of the C−H⋅⋅⋅O interaction.
Figure 2Solid‐state conformations of β‐turn mimic bearing different C−H⋅⋅⋅O donors with relevant intramolecular distances and angles (some atoms omitted for clarity; distances [Å] are indicated between atoms in bold).10 Positions of hydrogen atoms are calculated. *: Asymmetric unit contains two conformationally similar but crystallographically unique molecules; distances and hydrogen‐bond angles are given for only one molecule. Xanth=9‐xanthene.
Figure 3Solid‐state conformations of constructs that do not populate β‐turn like conformations. Positions of hydrogen atoms are calculated.
Figure 41H NMR chemical shift data for selected compounds bearing different C−H⋅⋅⋅O bond donors versus controls (C6D6, 298 K, 50 μm). Compounds are in decreasing Cα−H Δδ H.
Temperature coefficients for protons potentially involved in H‐bonding interactions.[a]
| Cmpd. | R1/R2 | Cα− | N− | |
|---|---|---|---|---|
|
|
| CF3/CF3 | −4.1 | −5.1 |
|
| cyclobutyl | −3.0 | −5.5 | |
|
| Me/Me | −3.0 | −5.2 | |
|
| H/H | −1.7 | −5.2 |
[a] Spectra recorded at 500 MHz, [D8]toluene, 50.0 μm, Δδ in ppb K−1.
Figure 51H NMR chemical shift data for selected compounds bearing different hydrogen‐bond acceptors versus control 25 (C6D6, 298 K, 50 μm). Compounds are ordered in decreasing Cα−H Δδ H. Ar=3,5‐(CF3)2C6H3.
Figure 6Optimized geometries of minima in the surfaces of 8, 9, 2 and 1 (and their respective controls 25, 26, 28 and 31) with close contacts indicated (distances in Å). Chemical shift changes (ΔδHcalcd, ppm) were estimated by first calculating the chemical shifts for 8, 9, 2 and 1 in their energy minimized conformations and subtracting the chemical shifts calculated for optimized conformations of 25, 26, 28 and 31, respectively. *: For 31 only one of two energetically equivalent minima are pictured, and Δδ H calcd is the mean of these two conformers (for 31: ϕ(OCCH)=113°; ΔδHcalcd=0.45 ppm. ϕ(OCCH)=178°; ΔδHcalcd=1.06 ppm).
Figure 7Computed rotational profiles of 8 as a function of dihedral angle ϕ(OCCH). Optimized structures are illustrated for important geometries.