| Literature DB >> 27701175 |
Zhi Song1, Lingling Qiu, Zhongyang Hu, Jia Liu, Ding Liu, Deren Hou.
Abstract
BACKGROUND: Obesity is a well-established risk factor for large artery atherosclerotic (LAA) stroke. The aim of the study was to explore whether obesity genes, such as MC4R and FTO, contribute to LAA stroke risk in the Chinese Han population.Entities:
Mesh:
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Year: 2016 PMID: 27701175 PMCID: PMC5644882 DOI: 10.1159/000448588
Source DB: PubMed Journal: Obes Facts ISSN: 1662-4025 Impact factor: 3.942
Demographic and clinical characteristics of recruited individuals
| Characteristic | Cases (n = 322) mean ± SD | Controls (n = 473) p value mean ± SD | ||
|---|---|---|---|---|
| Age | 61.92 ± 9.75 | 60.73 ± 9.21 | 0.081 | |
| TC, mmol/l | 4.75 ± 1.27 | 4.53 ± 1.03 | 0.006 | |
| LDL-C, mmol/l | 2.64 ± 0.89 | 2.48 ± 1.56 | 0.101 | |
| HDL-C, mmol/l | 1.31 ± 0.35 | 1.35 ± 0.73 | 0.381 | |
| TG, mmol/l | 1.79 ± 1.59 | 1.62 ± 1.49 | 0.147 | |
| BMI, kg/m2 | 23.18 ± 2.96 | 22.73 ± 3.09 | 0.046 | |
| FBS, mol/l | 6.21 ± 2.84 | 5.43 ± 1.98 | 2.106 × 10−5 a |
The p value was calculated by the unpaired Student's t-test.
The p value was calculated by the chi square test.
Genotype frequency distribution and association with LAA stroke susceptibility for the SNP (rs17782313)
| Genotype | Genotype frequencies, s% | OR (95s% CI) | p value | |
|---|---|---|---|---|
| case, n (s%) | control, n (s%) | |||
| Total participants | ||||
| TT | 223 (0.693) | 305 (0.645) | 1.154 (0.968–1.376) | 0.111 |
| TC | 87 (0.270) | 154 (0.325) | ||
| CC | 12 (0.037) | 14 (0.030) | ||
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| Non-smoker subgroup | ||||
| TT | 160 (68.7s%) | 264 (66.3s%) | 1.060 (0.866–1.297) | 0.571 |
| TC | 64 (27.5s%) | 12 (30.2s% | ||
| CC | 9 (3.8s%) | 14 (3.5s%) | ||
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| Smoker subgroup | ||||
| TT | 63 (70.8s%) | 41 (54.7s%) | 1.55 (1.07–2.23) | 0.020 |
| TC | 23 (25.8s%) | 34 (45.3s%) | ||
| CC | 3 (3.4s%) | 0 (0s% | ||
LAA stroke = Large artery atherosclerotic stroke; CI =confidence interval; OR = odds ratio; SNPs = single-nucleotide polymorphisms (only associated SNPs are shown).
OR (95s% CI) and p value for the additive genetic model after adjustment for covariates (hypertension, overweight, diabetes).
MDR models of loci and conventional risk factors for LAA stroke susceptibility
| Model | Training Bal. Acc | Testing Bal. Acc | CV consistency | p value | p value for permutation test |
|---|---|---|---|---|---|
| Hypertension | 0.7059 | 0.7059 | 10/10 | <0.001 | 0.001 |
| Rs17782313 hypertension | 0.7059 | 0.7044 | 7/10 | <0.0001 | 0.001 |
| Rs17782313 hypertension smoking habit | 0.7151 | 0.7151 | 10/10 | <0.0001 | 0.001 |
MDR = Multifactor dimensionality reduction; LAA stroke = large artery atherosclerotic stroke; Training Bal. Acc = training balanced accuracy; Testing Bal. Acc = testing balanced accuracy; CV consistency = cross-validation consistency.
Fig. 1The best model of factors contributing to LAA stroke identified by MDR. Notation: rs17782313 1/2/ 3 = TT/CC/TC. Smoking 0/1 = non-smoker/smoker. Hypertension 0/1 = non-hypertension/hypertension. The best model which is composed of MC4R locus (rs17782313), hypertension, and smoking habit may increase the risk of LAA stroke statistically. The number in the left bar of each cell represents the number of LAA stroke patients with the given combination, which is indicated with bar filled with dark shading. While the number in the right bar of each cell represents the number of control subjects with the given combination, which is indicated with bar filled with light shading. Background shading within each cell indicated the risk to LAA stroke of each given combination. In MDR analysis, the 3D combinations of MC4R locus (rs17782313), hypertension, and smoking habit were classified into high- or low-risk groups. High-risk cells are indicated by dark shading, low-risk cells by light shading. Based on the chi-square test, the OR value of the high-risk combinations of the synergistic effects model indicated a 6.57-fold increased risk of LAA stroke (p < 0.0001, OR (95s% CI) = 6.57 (4.79–9.01)).