Literature DB >> 27699119

Whole-body multispectral photoacoustic imaging of adult zebrafish.

Na Huang1, Heng Guo1, Weizhi Qi1, Zhiwei Zhang2, Jian Rong3, Zhen Yuan2, Wei Ge2, Huabei Jiang3, Lei Xi3.   

Abstract

The zebrafish, an ideal vertebrate for studying developmental biology and genetics, is increasingly being used to understand human diseases, due to its high similarity to the human genome and its optical transparency during embryonic stages. Once the zebrafish has fully developed, especially wild-type breeds, conventional optical imaging techniques have difficulty in imaging the internal organs and structures with sufficient resolution and penetration depth. Even with established mutant lines that remain transparent throughout their life cycle, it is still challenging for purely optical imaging modalities to visualize the organs of juvenile and adult zebrafish at a micro-scale spatial resolution. In this work, we developed a non-invasive three-dimensional photoacoustic imaging platform with an optimized illumination pattern and a cylindrical-scanning-based data collection system to image entire zebrafish with micro-scale resolutions of 80 μm and 600 μm in the lateral and axial directions, respectively. In addition, we employed a multispectral strategy that utilized excitation wavelengths from 690 nm to 930 nm to statistically quantify the relative optical absorption spectrum of major organs.

Entities:  

Keywords:  (170.5120) Photoacoustic imaging; (170.6960) Tomography

Year:  2016        PMID: 27699119      PMCID: PMC5030031          DOI: 10.1364/BOE.7.003543

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  29 in total

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2.  Cells segmentation from 3-D confocal images of early zebrafish embryogenesis.

Authors:  Cecilia Zanella; Matteo Campana; Barbara Rizzi; Camilo Melani; Gonzalo Sanguinetti; Paul Bourgine; Karol Mikula; Nadine Peyrieras; Alessandro Sarti
Journal:  IEEE Trans Image Process       Date:  2009-10-06       Impact factor: 10.856

3.  The vascular anatomy of the developing zebrafish: an atlas of embryonic and early larval development.

Authors:  S Isogai; M Horiguchi; B M Weinstein
Journal:  Dev Biol       Date:  2001-02-15       Impact factor: 3.582

4.  Vertebrate genome evolution and the zebrafish gene map.

Authors:  J H Postlethwait; Y L Yan; M A Gates; S Horne; A Amores; A Brownlie; A Donovan; E S Egan; A Force; Z Gong; C Goutel; A Fritz; R Kelsh; E Knapik; E Liao; B Paw; D Ransom; A Singer; M Thomson; T S Abduljabbar; P Yelick; D Beier; J S Joly; D Larhammar; F Rosa; M Westerfield; L I Zon; S L Johnson; W S Talbot
Journal:  Nat Genet       Date:  1998-04       Impact factor: 38.330

5.  In vivo magnetic resonance imaging to detect malignant melanoma in adult zebrafish.

Authors:  Samira Kabli; Shuning He; Herman P Spaink; Adam Hurlstone; Ewa Snaar Jagalska; Huub J M De Groot; A Alia
Journal:  Zebrafish       Date:  2010-06       Impact factor: 1.985

6.  Ultrasound biomicroscopy permits in vivo characterization of zebrafish liver tumors.

Authors:  Wolfram Goessling; Trista E North; Leonard I Zon
Journal:  Nat Methods       Date:  2007-06-17       Impact factor: 28.547

7.  Non-invasive whole-body imaging of adult zebrafish with optoacoustic tomography.

Authors:  Rui Ma; Martin Distel; X Luís Deán-Ben; Vasilis Ntziachristos; Daniel Razansky
Journal:  Phys Med Biol       Date:  2012-10-17       Impact factor: 3.609

Review 8.  Genetic models of cancer in zebrafish.

Authors:  James F Amatruda; E Elizabeth Patton
Journal:  Int Rev Cell Mol Biol       Date:  2008       Impact factor: 6.813

9.  Transparent adult zebrafish as a tool for in vivo transplantation analysis.

Authors:  Richard Mark White; Anna Sessa; Christopher Burke; Teresa Bowman; Jocelyn LeBlanc; Craig Ceol; Caitlin Bourque; Michael Dovey; Wolfram Goessling; Caroline Erter Burns; Leonard I Zon
Journal:  Cell Stem Cell       Date:  2008-02-07       Impact factor: 24.633

10.  Label-free imaging of zebrafish larvae in vivo by photoacoustic microscopy.

Authors:  Shuoqi Ye; Ran Yang; Jingwei Xiong; K Kirk Shung; Qifa Zhou; Changhui Li; Qiushi Ren
Journal:  Biomed Opt Express       Date:  2012-01-24       Impact factor: 3.732

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  5 in total

1.  Label-free photoacoustic imaging of the cardio-cerebrovascular development in the embryonic zebrafish.

Authors:  Qian Chen; Tian Jin; Weizhi Qi; Xianming Mo; Lei Xi
Journal:  Biomed Opt Express       Date:  2017-03-30       Impact factor: 3.732

2.  Noninvasive in vivo monitoring of collagenase induced intracerebral hemorrhage by photoacoustic tomography.

Authors:  Dan Wu; Jinge Yang; Guang Zhang; Huabei Jiang
Journal:  Biomed Opt Express       Date:  2017-03-21       Impact factor: 3.732

3.  Design and evaluation of a compound acoustic lens for photoacoustic computed tomography.

Authors:  Shirui Yang; Wei Qin; Heng Guo; Tian Jin; Na Huang; Ming He; Lei Xi
Journal:  Biomed Opt Express       Date:  2017-04-27       Impact factor: 3.732

4.  Non-destructive characterization of adult zebrafish models using Jones matrix optical coherence tomography.

Authors:  Antonia Lichtenegger; Pradipta Mukherjee; Lida Zhu; Rion Morishita; Kiriko Tomita; Daisuke Oida; Konrad Leskovar; Ibrahim Abd El-Sadek; Shuichi Makita; Stefanie Kirchberger; Martin Distel; Bernhard Baumann; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2022-03-17       Impact factor: 3.562

5.  Seed-Mediated Synthesis of Tunable-Aspect-Ratio Gold Nanorods for Near-Infrared Photoacoustic Imaging.

Authors:  Pengwei Li; Yiduo Wu; Dingding Li; Xiaoxiao Su; Cuixian Luo; Ying Wang; Jie Hu; Gang Li; Huabei Jiang; Wendong Zhang
Journal:  Nanoscale Res Lett       Date:  2018-10-04       Impact factor: 4.703

  5 in total

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