Literature DB >> 2769759

Competitive nucleosome reconstitution of polydeoxynucleotides containing oligoguanosine tracts.

S D Jayasena1, M J Behe.   

Abstract

The ability of synthetic polydeoxynucleotides composed of oligoguanosine tracts of increasing length to form nucleosomes has been determined by several reconstitution procedures. When the presence of nucleosomes is determined by resistance to nuclease digestion, a protected band of approximately 150 base-pairs is detected only with difficulty for polymers containing long tracts of contiguous guanosines. However, when assayed by a shift in the electrophoretic mobility of radiolabeled polymers exchanged at 0.7 M-NaCl with authentic nucleosomes, all polymers tested are seen to form nucleosomes. Quantitative competitive reconstitution shows that the length of the tracts per se does not adversely affect their propensity to form nucleosomes, since even 150 base-pair poly(dG).poly(dC) forms nucleosomes as well as heterogeneous-sequence DNA. However, the ability to form nucleosomes does depend on the length of the polymer repeating unit.

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Year:  1989        PMID: 2769759     DOI: 10.1016/0022-2836(89)90390-2

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Eukaryotic DNA does not form nucleosomes as readily as some prokaryotic DNA.

Authors:  R C Getts; M J Behe
Journal:  Nucleic Acids Res       Date:  1991-11-11       Impact factor: 16.971

2.  Control of meiotic recombination and gene expression in yeast by a simple repetitive DNA sequence that excludes nucleosomes.

Authors:  D T Kirkpatrick; Y H Wang; M Dominska; J D Griffith; T D Petes
Journal:  Mol Cell Biol       Date:  1999-11       Impact factor: 4.272

3.  DNA damage can alter the stability of nucleosomes: effects are dependent on damage type.

Authors:  D B Mann; D L Springer; M J Smerdon
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

4.  An overabundance of long oligopurine tracts occurs in the genome of simple and complex eukaryotes.

Authors:  M J Behe
Journal:  Nucleic Acids Res       Date:  1995-02-25       Impact factor: 16.971

5.  Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

Authors:  V Iyer; K Struhl
Journal:  EMBO J       Date:  1995-06-01       Impact factor: 11.598

6.  A nucleosome-dependent static loop potentiates estrogen-regulated transcription from the Xenopus vitellogenin B1 promoter in vitro.

Authors:  C Schild; F X Claret; W Wahli; A P Wolffe
Journal:  EMBO J       Date:  1993-02       Impact factor: 11.598

7.  Homopolymer tract length dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition.

Authors:  Yue Zhou; Jeffrey W Bizzaro; Kenneth A Marx
Journal:  BMC Genomics       Date:  2004-12-14       Impact factor: 3.969

8.  Modulation of cyclobutane thymine photodimer formation in T11-tracts in rotationally phased nucleosome core particles and DNA minicircles.

Authors:  Kesai Wang; John-Stephen A Taylor
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

  8 in total

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