Literature DB >> 27695655

Probing and rearranging the transcription factor network controlling the C. elegans endoderm.

Tobias Wiesenfahrt1, Erin Osborne Nishimura2, Janette Y Berg1, James D McGhee1.   

Abstract

The ELT-2 GATA factor is the predominant transcription factor regulating gene expression in the C. elegans intestine, following endoderm specification. We comment on our previous study (Wiesenfahrt et al., 2016) that investigated how the elt-2 gene is controlled by END-1, END-3 and ELT-7, the 3 endoderm specific GATA factors that lie upstream in the regulatory hierarchy. We also discuss the unexpected result that ELT-2, if expressed sufficiently early and at sufficiently high levels, can specify the C. elegans endoderm, replacing the normal functions of END-1 and END-3.

Entities:  

Keywords:  C. elegans; ELT-2; ELT-7; END-1; END-3; GATA factor; gene regulation; intestine; transcription

Year:  2016        PMID: 27695655      PMCID: PMC5022670          DOI: 10.1080/21624054.2016.1198869

Source DB:  PubMed          Journal:  Worm        ISSN: 2162-4046


  44 in total

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Authors:  Roger K Patient; James D McGhee
Journal:  Curr Opin Genet Dev       Date:  2002-08       Impact factor: 5.578

2.  The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestine.

Authors:  James D McGhee; Monica C Sleumer; Mikhail Bilenky; Kim Wong; Sheldon J McKay; Barbara Goszczynski; Helen Tian; Natisha D Krich; Jaswinder Khattra; Robert A Holt; David L Baillie; Yuji Kohara; Marco A Marra; Steven J M Jones; Donald G Moerman; A Gordon Robertson
Journal:  Dev Biol       Date:  2006-10-21       Impact factor: 3.582

Review 3.  Robustness and evolution: concepts, insights and challenges from a developmental model system.

Authors:  M-A Félix; A Wagner
Journal:  Heredity (Edinb)       Date:  2006-12-13       Impact factor: 3.821

Review 4.  The Caenorhabditis elegans intestine.

Authors:  James D McGhee
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2012-10-09       Impact factor: 5.814

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Authors:  J E Sulston; E Schierenberg; J G White; J N Thomson
Journal:  Dev Biol       Date:  1983-11       Impact factor: 3.582

6.  Gene transcription is coordinated with, but not dependent on, cell divisions during C. elegans embryonic fate specification.

Authors:  Gautham Nair; Travis Walton; John Isaac Murray; Arjun Raj
Journal:  Development       Date:  2013-07-17       Impact factor: 6.868

7.  The GATA-factor elt-2 is essential for formation of the Caenorhabditis elegans intestine.

Authors:  T Fukushige; M G Hawkins; J D McGhee
Journal:  Dev Biol       Date:  1998-06-15       Impact factor: 3.582

8.  Ectopic expression of a Haemonchus contortus GATA transcription factor in Caenorhabditis elegans reveals conserved function in spite of extensive sequence divergence.

Authors:  Annabelle Couthier; Judith Smith; Pamela McGarr; Barbara Craig; John S Gilleard
Journal:  Mol Biochem Parasitol       Date:  2004-02       Impact factor: 1.759

9.  Rescue of the En-1 mutant phenotype by replacement of En-1 with En-2.

Authors:  M Hanks; W Wurst; L Anson-Cartwright; A B Auerbach; A L Joyner
Journal:  Science       Date:  1995-08-04       Impact factor: 47.728

Review 10.  Mechanisms of iron metabolism in Caenorhabditis elegans.

Authors:  Cole P Anderson; Elizabeth A Leibold
Journal:  Front Pharmacol       Date:  2014-05-21       Impact factor: 5.810

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  2 in total

1.  Extensive intraspecies cryptic variation in an ancient embryonic gene regulatory network.

Authors:  Yamila N Torres Cleuren; Chee Kiang Ewe; Kyle C Chipman; Emily R Mears; Cricket G Wood; Coco Emma Alma Al-Alami; Melissa R Alcorn; Thomas L Turner; Pradeep M Joshi; Russell G Snell; Joel H Rothman
Journal:  Elife       Date:  2019-08-15       Impact factor: 8.140

Review 2.  Evolution and Developmental System Drift in the Endoderm Gene Regulatory Network of Caenorhabditis and Other Nematodes.

Authors:  Chee Kiang Ewe; Yamila N Torres Cleuren; Joel H Rothman
Journal:  Front Cell Dev Biol       Date:  2020-03-18
  2 in total

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