Literature DB >> 27694237

Ferredoxin:NAD+ Oxidoreductase of Thermoanaerobacterium saccharolyticum and Its Role in Ethanol Formation.

Liang Tian1,2, Jonathan Lo3, Xiongjun Shao1,2, Tianyong Zheng1,2, Daniel G Olson1,2, Lee R Lynd4,2.   

Abstract

Ferredoxin:NAD+ oxidoreductase (NADH-FNOR) catalyzes the transfer of electrons from reduced ferredoxin to NAD+ This enzyme has been hypothesized to be the main enzyme responsible for ferredoxin oxidization in the NADH-based ethanol pathway in Thermoanaerobacterium saccharolyticum; however, the corresponding gene has not yet been identified. Here, we identified the Tsac_1705 protein as a candidate FNOR based on the homology of its functional domains. We then confirmed its activity in vitro with a ferredoxin-based FNOR assay. To determine its role in metabolism, the tsac_1705 gene was deleted in different strains of T. saccharolyticum In wild-type T. saccharolyticum, deletion of tsac_1705 resulted in a 75% loss of NADH-FNOR activity, which indicated that Tsac_1705 is the main NADH-FNOR in T. saccharolyticum When both NADH- and NADPH-linked FNOR genes were deleted, the ethanol titer decreased and the ratio of ethanol to acetate approached unity, indicative of the absence of FNOR activity. Finally, we tested the effect of heterologous expression of Tsac_1705 in Clostridium thermocellum and found improvements in both the titer and the yield of ethanol. IMPORTANCE: Redox balance plays a crucial role in many metabolic engineering strategies. Ferredoxins are widely used as electron carriers for anaerobic microorganism and plants. This study identified the gene responsible for electron transfer from ferredoxin to NAD+, a key reaction in the ethanol production pathway of this organism and many other metabolic pathways. Identification of this gene is an important step in transferring the ethanol production ability of this organism to other organisms.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27694237      PMCID: PMC5118924          DOI: 10.1128/AEM.02130-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  39 in total

1.  Structure of dihydroorotate dehydrogenase B: electron transfer between two flavin groups bridged by an iron-sulphur cluster.

Authors:  P Rowland; S Nørager; K F Jensen; S Larsen
Journal:  Structure       Date:  2000-12-15       Impact factor: 5.006

2.  Ferredoxin:NADP oxidoreductase from Pyrococcus furiosus.

Authors:  K Ma; M W Adams
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

3.  Role of a ferredoxin gene cotranscribed with the nifHDK operon in N(2) fixation and nitrogenase "switch-off" of Azoarcus sp. strain BH72.

Authors:  T Egener; D E Martin; A Sarkar; B Reinhold-Hurek
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

4.  Ferredoxins as electron carriers in photosynthesis and in the biological production and consumption of hydrogen gas.

Authors:  K TAGAWA; D I ARNON
Journal:  Nature       Date:  1962-08-11       Impact factor: 49.962

Review 5.  Metabolic pathways of clostridia for producing butanol.

Authors:  R Gheshlaghi; J M Scharer; M Moo-Young; C P Chou
Journal:  Biotechnol Adv       Date:  2009-06-17       Impact factor: 14.227

6.  Functional assignment of the ORF2-iscS-iscU-iscA-hscB-hscA-fdx-ORF3 gene cluster involved in the assembly of Fe-S clusters in Escherichia coli.

Authors:  Y Takahashi; M Nakamura
Journal:  J Biochem       Date:  1999-11       Impact factor: 3.387

Review 7.  The role of glutamine synthetase and glutamate dehydrogenase in nitrogen assimilation and possibilities for improvement in the nitrogen utilization of crops.

Authors:  Ben J Miflin; Dimah Z Habash
Journal:  J Exp Bot       Date:  2002-04       Impact factor: 6.992

8.  Hyperproduction of recombinant ferredoxins in escherichia coli by coexpression of the ORF1-ORF2-iscS-iscU-iscA-hscB-hs cA-fdx-ORF3 gene cluster.

Authors:  M Nakamura; K Saeki; Y Takahashi
Journal:  J Biochem       Date:  1999-07       Impact factor: 3.387

9.  Identification of the [FeFe]-hydrogenase responsible for hydrogen generation in Thermoanaerobacterium saccharolyticum and demonstration of increased ethanol yield via hydrogenase knockout.

Authors:  A Joe Shaw; David A Hogsett; Lee R Lynd
Journal:  J Bacteriol       Date:  2009-07-31       Impact factor: 3.490

10.  Carbon dioxide activation at the Ni,Fe-cluster of anaerobic carbon monoxide dehydrogenase.

Authors:  Jae-Hun Jeoung; Holger Dobbek
Journal:  Science       Date:  2007-11-30       Impact factor: 47.728

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  11 in total

1.  Anaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes.

Authors:  Dimitry Y Sorokin; Alexander Y Merkel; Enzo Messina; Claudia Tugui; Martin Pabst; Peter N Golyshin; Michail M Yakimov
Journal:  ISME J       Date:  2022-02-07       Impact factor: 11.217

Review 2.  Flavin-Based Electron Bifurcation, Ferredoxin, Flavodoxin, and Anaerobic Respiration With Protons (Ech) or NAD+ (Rnf) as Electron Acceptors: A Historical Review.

Authors:  Wolfgang Buckel; Rudolf K Thauer
Journal:  Front Microbiol       Date:  2018-03-14       Impact factor: 5.640

3.  The redox-sensing protein Rex modulates ethanol production in Thermoanaerobacterium saccharolyticum.

Authors:  Tianyong Zheng; Anthony A Lanahan; Lee R Lynd; Daniel G Olson
Journal:  PLoS One       Date:  2018-04-05       Impact factor: 3.240

4.  A mutation in the AdhE alcohol dehydrogenase of Clostridium thermocellum increases tolerance to several primary alcohols, including isobutanol, n-butanol and ethanol.

Authors:  Liang Tian; Nicholas D Cervenka; Aidan M Low; Daniel G Olson; Lee R Lynd
Journal:  Sci Rep       Date:  2019-02-11       Impact factor: 4.379

5.  Metabolic engineering of Clostridium thermocellum for n-butanol production from cellulose.

Authors:  Liang Tian; Peter M Conway; Nicholas D Cervenka; Jingxuan Cui; Marybeth Maloney; Daniel G Olson; Lee R Lynd
Journal:  Biotechnol Biofuels       Date:  2019-07-23       Impact factor: 6.040

6.  Conversion of phosphoenolpyruvate to pyruvate in Thermoanaerobacterium saccharolyticum.

Authors:  Jingxuan Cui; Marybeth I Maloney; Daniel G Olson; Lee R Lynd
Journal:  Metab Eng Commun       Date:  2020-01-23

7.  Metabolome analysis reveals a role for glyceraldehyde 3-phosphate dehydrogenase in the inhibition of C. thermocellum by ethanol.

Authors:  Liang Tian; Skyler J Perot; David Stevenson; Tyler Jacobson; Anthony A Lanahan; Daniel Amador-Noguez; Daniel G Olson; Lee R Lynd
Journal:  Biotechnol Biofuels       Date:  2017-11-30       Impact factor: 6.040

8.  Progress in understanding and overcoming biomass recalcitrance: a BioEnergy Science Center (BESC) perspective.

Authors:  Paul Gilna; Lee R Lynd; Debra Mohnen; Mark F Davis; Brian H Davison
Journal:  Biotechnol Biofuels       Date:  2017-11-30       Impact factor: 6.040

9.  Enhanced ethanol formation by Clostridium thermocellum via pyruvate decarboxylase.

Authors:  Liang Tian; Skyler J Perot; Shuen Hon; Jilai Zhou; Xiaoyu Liang; Jason T Bouvier; Adam M Guss; Daniel G Olson; Lee R Lynd
Journal:  Microb Cell Fact       Date:  2017-10-04       Impact factor: 5.328

10.  Expressing the Thermoanaerobacterium saccharolyticum pforA in engineered Clostridium thermocellum improves ethanol production.

Authors:  Shuen Hon; Evert K Holwerda; Robert S Worthen; Marybeth I Maloney; Liang Tian; Jingxuan Cui; Paul P Lin; Lee R Lynd; Daniel G Olson
Journal:  Biotechnol Biofuels       Date:  2018-09-06       Impact factor: 6.040

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