Literature DB >> 27687518

Quantification of γ-aminobutyric acid (GABA) in 1 H MRS volumes composed heterogeneously of grey and white matter.

Mark Mikkelsen1,2,3, Krish D Singh4, Jennifer A Brealy5, David E J Linden4,5, C John Evans4.   

Abstract

The quantification of γ-aminobutyric acid (GABA) concentration using localised MRS suffers from partial volume effects related to differences in the intrinsic concentration of GABA in grey (GM) and white (WM) matter. These differences can be represented as a ratio between intrinsic GABA in GM and WM: rM . Individual differences in GM tissue volume can therefore potentially drive apparent concentration differences. Here, a quantification method that corrects for these effects is formulated and empirically validated. Quantification using tissue water as an internal concentration reference has been described previously. Partial volume effects attributed to rM can be accounted for by incorporating into this established method an additional multiplicative correction factor based on measured or literature values of rM weighted by the proportion of GM and WM within tissue-segmented MRS volumes. Simulations were performed to test the sensitivity of this correction using different assumptions of rM taken from previous studies. The tissue correction method was then validated by applying it to an independent dataset of in vivo GABA measurements using an empirically measured value of rM . It was shown that incorrect assumptions of rM can lead to overcorrection and inflation of GABA concentration measurements quantified in volumes composed predominantly of WM. For the independent dataset, GABA concentration was linearly related to GM tissue volume when only the water signal was corrected for partial volume effects. Performing a full correction that additionally accounts for partial volume effects ascribed to rM successfully removed this dependence. With an appropriate assumption of the ratio of intrinsic GABA concentration in GM and WM, GABA measurements can be corrected for partial volume effects, potentially leading to a reduction in between-participant variance, increased power in statistical tests and better discriminability of true effects.
Copyright © 2016 John Wiley & Sons, Ltd.

Entities:  

Keywords:  GABA; MRS; grey matter; metabolite quantification; partial volume effects; tissue correction; tissue segmentation; white matter

Mesh:

Substances:

Year:  2016        PMID: 27687518     DOI: 10.1002/nbm.3622

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  9 in total

1.  Big GABA: Edited MR spectroscopy at 24 research sites.

Authors:  Mark Mikkelsen; Peter B Barker; Pallab K Bhattacharyya; Maiken K Brix; Pieter F Buur; Kim M Cecil; Kimberly L Chan; David Y-T Chen; Alexander R Craven; Koen Cuypers; Michael Dacko; Niall W Duncan; Ulrike Dydak; David A Edmondson; Gabriele Ende; Lars Ersland; Fei Gao; Ian Greenhouse; Ashley D Harris; Naying He; Stefanie Heba; Nigel Hoggard; Tun-Wei Hsu; Jacobus F A Jansen; Alayar Kangarlu; Thomas Lange; R Marc Lebel; Yan Li; Chien-Yuan E Lin; Jy-Kang Liou; Jiing-Feng Lirng; Feng Liu; Ruoyun Ma; Celine Maes; Marta Moreno-Ortega; Scott O Murray; Sean Noah; Ralph Noeske; Michael D Noseworthy; Georg Oeltzschner; James J Prisciandaro; Nicolaas A J Puts; Timothy P L Roberts; Markus Sack; Napapon Sailasuta; Muhammad G Saleh; Michael-Paul Schallmo; Nicholas Simard; Stephan P Swinnen; Martin Tegenthoff; Peter Truong; Guangbin Wang; Iain D Wilkinson; Hans-Jörg Wittsack; Hongmin Xu; Fuhua Yan; Chencheng Zhang; Vadim Zipunnikov; Helge J Zöllner; Richard A E Edden
Journal:  Neuroimage       Date:  2017-07-14       Impact factor: 6.556

2.  Age-related differences in GABA levels are driven by bulk tissue changes.

Authors:  Celine Maes; Lize Hermans; Lisa Pauwels; Sima Chalavi; Inge Leunissen; Oron Levin; Koen Cuypers; Ronald Peeters; Stefan Sunaert; Dante Mantini; Nicolaas A J Puts; Richard A E Edden; Stephan P Swinnen
Journal:  Hum Brain Mapp       Date:  2018-05-02       Impact factor: 5.038

3.  Simultaneous editing of GABA and GSH with Hadamard-encoded MR spectroscopic imaging.

Authors:  Kimberly L Chan; Georg Oeltzschner; Muhammad G Saleh; Richard A E Edden; Peter B Barker
Journal:  Magn Reson Med       Date:  2019-02-22       Impact factor: 4.668

4.  Comparison of seven modelling algorithms for γ-aminobutyric acid-edited proton magnetic resonance spectroscopy.

Authors:  Alexander R Craven; Pallab K Bhattacharyya; William T Clarke; Ulrike Dydak; Richard A E Edden; Lars Ersland; Pravat K Mandal; Mark Mikkelsen; James B Murdoch; Jamie Near; Reuben Rideaux; Deepika Shukla; Min Wang; Martin Wilson; Helge J Zöllner; Kenneth Hugdahl; Georg Oeltzschner
Journal:  NMR Biomed       Date:  2022-02-23       Impact factor: 4.478

5.  Automated ROI-Based Labeling for Multi-Voxel Magnetic Resonance Spectroscopy Data Using FreeSurfer.

Authors:  Benjamin Spurny; Eva Heckova; Rene Seiger; Philipp Moser; Manfred Klöbl; Thomas Vanicek; Marie Spies; Wolfgang Bogner; Rupert Lanzenberger
Journal:  Front Mol Neurosci       Date:  2019-02-14       Impact factor: 5.639

6.  A comparison of sLASER and MEGA-sLASER using simultaneous interleaved acquisition for measuring GABA in the human brain at 7T.

Authors:  Donghyun Hong; Seyedmorteza Rohani Rankouhi; Jan-Willem Thielen; Jack J A van Asten; David G Norris
Journal:  PLoS One       Date:  2019-10-11       Impact factor: 3.240

7.  The Relationship Between Resting Cerebral Blood Flow, Neurometabolites, Cardio-Respiratory Fitness and Aging-Related Cognitive Decline.

Authors:  Venkatagiri Krishnamurthy; Isabella Paredes Spir; Kevin M Mammino; Joe R Nocera; Keith M McGregor; Bruce A Crosson; Lisa C Krishnamurthy
Journal:  Front Psychiatry       Date:  2022-06-09       Impact factor: 5.435

8.  Randomised controlled trial of simvastatin treatment for autism in young children with neurofibromatosis type 1 (SANTA).

Authors:  Stavros Stivaros; Shruti Garg; Jonathan Green; Maria Tziraki; Ying Cai; Owen Thomas; Joseph Mellor; Andrew A Morris; Carly Jim; Karolina Szumanska-Ryt; Laura M Parkes; Hamied A Haroon; Daniela Montaldi; Nicholas Webb; John Keane; Francisco X Castellanos; Alcino J Silva; Sue Huson; Stephen Williams; D Gareth Evans; Richard Emsley
Journal:  Mol Autism       Date:  2018-02-22       Impact factor: 7.509

9.  Neurophysiological modulations in the (pre)motor-motor network underlying age-related increases in reaction time and the role of GABA levels - a bimodal TMS-MRS study.

Authors:  Stefanie Verstraelen; Koen Cuypers; Celine Maes; Melina Hehl; Shanti Van Malderen; Oron Levin; Mark Mikkelsen; Raf L J Meesen; Stephan P Swinnen
Journal:  Neuroimage       Date:  2021-08-21       Impact factor: 6.556

  9 in total

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