Literature DB >> 27683222

2016 update of the PRIDE database and its related tools.

Juan Antonio Vizcaíno1, Attila Csordas2, Noemi Del-Toro2, José A Dianes2, Johannes Griss2,3, Ilias Lavidas2, Gerhard Mayer4, Yasset Perez-Riverol2, Florian Reisinger2, Tobias Ternent2, Qing-Wei Xu2,5, Rui Wang2, Henning Hermjakob2,6.   

Abstract

Year:  2016        PMID: 27683222      PMCID: PMC5159556          DOI: 10.1093/nar/gkw880

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


× No keyword cloud information.
Nucl. Acids Res. (04 January 2016) 44 (D1): D447–D456. doi: 10.1093/nar/gkv1145. The authors wish to correct the affiliation of one of the authors. Gerhard Mayer's only affiliation should be 3Medizinisches Proteom Center (MPC), Ruhr-Universität Bochum, D-44801 Bochum, Germany. He does NOT have a second affiliation at: 1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. The authors apologise to the readers for this error.
  325 in total

1.  Triazine Probes Target Ascorbate Peroxidases in Plants.

Authors:  Kyoko Morimoto; Kyle S Cole; Jiorgos Kourelis; Collin H Witt; Daniel Brown; Daniel Krahn; Monika Stegmann; Farnusch Kaschani; Markus Kaiser; Jonathan Burton; Shabaz Mohammed; Kazuko Yamaguchi-Shinozaki; Eranthie Weerapana; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2019-05-28       Impact factor: 8.340

2.  Metaproteomics of Colonic Microbiota Unveils Discrete Protein Functions among Colitic Mice and Control Groups.

Authors:  Clara Moon; Gregory S Stupp; Andrew I Su; Dennis W Wolan
Journal:  Proteomics       Date:  2018-02-02       Impact factor: 3.984

3.  SILAC-Based Quantitative Proteomic Analysis Unveils Arsenite-Induced Perturbation of Multiple Pathways in Human Skin Fibroblast Cells.

Authors:  Fan Zhang; Yongsheng Xiao; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2017-02-14       Impact factor: 3.739

4.  DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.

Authors:  Rajat Gupta; Kumar Somyajit; Takeo Narita; Elina Maskey; Andre Stanlie; Magdalena Kremer; Dimitris Typas; Michael Lammers; Niels Mailand; Andre Nussenzweig; Jiri Lukas; Chunaram Choudhary
Journal:  Cell       Date:  2018-04-12       Impact factor: 41.582

5.  O-Fucosylation of thrombospondin-like repeats is required for processing of microneme protein 2 and for efficient host cell invasion by Toxoplasma gondii tachyzoites.

Authors:  Giulia Bandini; Deborah R Leon; Carolin M Hoppe; Yue Zhang; Carolina Agop-Nersesian; Melanie J Shears; Lara K Mahal; Françoise H Routier; Catherine E Costello; John Samuelson
Journal:  J Biol Chem       Date:  2018-12-11       Impact factor: 5.157

6.  Proteomics INTegrator (PINT): An Online Tool To Store, Query, and Visualize Large Proteomics Experiment Results.

Authors:  Salvador Martínez-Bartolomé; Tom Casimir Bamberger; Mathieu Lavallée-Adam; Daniel B McClatchy; John R Yates
Journal:  J Proteome Res       Date:  2019-07-01       Impact factor: 4.466

7.  The homophilic receptor PTPRK selectively dephosphorylates multiple junctional regulators to promote cell-cell adhesion.

Authors:  Gareth W Fearnley; Katherine A Young; James R Edgar; Robin Antrobus; Iain M Hay; Wei-Ching Liang; Nadia Martinez-Martin; WeiYu Lin; Janet E Deane; Hayley J Sharpe
Journal:  Elife       Date:  2019-03-29       Impact factor: 8.140

8.  Relative protein quantification and accessible biology in lung tumor proteomes from four LC-MS/MS discovery platforms.

Authors:  Paul A Stewart; Bin Fang; Robbert J C Slebos; Guolin Zhang; Adam L Borne; Katherine Fellows; Jamie K Teer; Y Ann Chen; Eric Welsh; Steven A Eschrich; Eric B Haura; John M Koomen
Journal:  Proteomics       Date:  2017-03       Impact factor: 3.984

9.  Quantifying Competition among Mitochondrial Protein Acylation Events Induced by Ethanol Metabolism.

Authors:  Hadi R Ali; Mohammed A Assiri; Peter S Harris; Cole R Michel; Youngho Yun; John O Marentette; Frank K Huynh; David J Orlicky; Colin T Shearn; Laura M Saba; Richard Reisdorph; Nichole Reisdorph; Matthew D Hirschey; Kristofer S Fritz
Journal:  J Proteome Res       Date:  2019-01-31       Impact factor: 4.466

10.  Chemical Crosslinking Mass Spectrometry Reveals the Conformational Landscape of the Activation Helix of PPARγ; a Model for Ligand-Dependent Antagonism.

Authors:  Jie Zheng; Cesar Corzo; Mi Ra Chang; Jinsai Shang; Vinh Q Lam; Richard Brust; Anne-Laure Blayo; John B Bruning; Theodore M Kamenecka; Douglas J Kojetin; Patrick R Griffin
Journal:  Structure       Date:  2018-08-23       Impact factor: 5.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.