Literature DB >> 27671779

Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail?

Martin Beck1, Wolfgang Baumeister2.   

Abstract

Traditionally, macromolecular structure determination is performed ex situ, that is, with purified materials. But, there are strong incentives to develop approaches to study them in situ in their native functional context. In recent years, cryo-electron tomography (cryo-ET) has emerged as a powerful method for visualizing the molecular organization of unperturbed cellular landscapes with the potential to attain near-atomic resolution. Here, we review recent work on several macromolecular assemblies, demonstrating the power of in situ studies. We also highlight technical challenges and discuss ways to meet them.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27671779     DOI: 10.1016/j.tcb.2016.08.006

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  77 in total

Review 1.  From Atoms to Cells: Using Mesoscale Landscapes to Construct Visual Narratives.

Authors:  David S Goodsell; Margaret A Franzen; Tim Herman
Journal:  J Mol Biol       Date:  2018-06-07       Impact factor: 5.469

2.  Comparison of 3D cellular imaging techniques based on scanned electron probes: Serial block face SEM vs. Axial bright-field STEM tomography.

Authors:  E L McBride; A Rao; G Zhang; J D Hoyne; G N Calco; B C Kuo; Q He; A A Prince; I D Pokrovskaya; B Storrie; A A Sousa; M A Aronova; R D Leapman
Journal:  J Struct Biol       Date:  2018-02-01       Impact factor: 2.867

3.  Enhancement of tomogram interpretability using the locked self-rotation function.

Authors:  Andrei Fokine; Baldeep Khare; Yingyuan Sun; Michael G Rossmann
Journal:  J Struct Biol       Date:  2019-02-08       Impact factor: 2.867

Review 4.  Sample preparation strategies for efficient correlation of 3D SIM and soft X-ray tomography data at cryogenic temperatures.

Authors:  Chidinma A Okolo; Ilias Kounatidis; Johannes Groen; Kamal L Nahas; Stefan Balint; Thomas M Fish; Mohamed A Koronfel; Aitziber L Cortajarena; Ian M Dobbie; Eva Pereiro; Maria Harkiolaki
Journal:  Nat Protoc       Date:  2021-05-14       Impact factor: 13.491

5.  High Rac1 activity is functionally translated into cytosolic structures with unique nanoscale cytoskeletal architecture.

Authors:  Daniel J Marston; Karen L Anderson; Mark F Swift; Marie Rougie; Christopher Page; Klaus M Hahn; Niels Volkmann; Dorit Hanein
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-10       Impact factor: 11.205

6.  Revealing the architecture of protein complexes by an orthogonal approach combining HDXMS, CXMS, and disulfide trapping.

Authors:  Kunhong Xiao; Yang Zhao; Minjung Choi; Hongda Liu; Adi Blanc; Jiang Qian; Thomas J Cahill; Xue Li; Yunfang Xiao; Lisa J Clark; Sheng Li
Journal:  Nat Protoc       Date:  2018-05-24       Impact factor: 13.491

Review 7.  The nuclear pore complex core scaffold and permeability barrier: variations of a common theme.

Authors:  Ryo Hayama; Michael P Rout; Javier Fernandez-Martinez
Journal:  Curr Opin Cell Biol       Date:  2017-06-15       Impact factor: 8.382

8.  A physical mechanism of TANGO1-mediated bulky cargo export.

Authors:  Ishier Raote; Morgan Chabanon; Nikhil Walani; Marino Arroyo; Maria F Garcia-Parajo; Vivek Malhotra; Felix Campelo
Journal:  Elife       Date:  2020-11-10       Impact factor: 8.140

9.  Multi-scale 3D Cryo-Correlative Microscopy for Vitrified Cells.

Authors:  Gong-Her Wu; Patrick G Mitchell; Jesus G Galaz-Montoya; Corey W Hecksel; Emily M Sontag; Vimal Gangadharan; Jeffrey Marshman; David Mankus; Margaret E Bisher; Abigail K R Lytton-Jean; Judith Frydman; Kirk Czymmek; Wah Chiu
Journal:  Structure       Date:  2020-08-18       Impact factor: 5.006

10.  Instant Construction and Visualization of Crowded Biological Environments.

Authors:  Tobias Klein; Ludovic Autin; Barbora Kozlikova; David S Goodsell; Arthur Olson; M Eduard Groller; Ivan Viola
Journal:  IEEE Trans Vis Comput Graph       Date:  2017-08-29       Impact factor: 4.579

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