Literature DB >> 27663023

Innovative Use of Palladium Compounds To Selectively Detect Live Enterobacteriaceae in Milk by PCR.

Takashi Soejima1, Kei-Ji Iwatsuki2.   

Abstract

Ethidium monoazide and propidium monoazide (EMA and PMA) have been used in combination with PCR for more than a decade to facilitate the discrimination of live and dead bacteria (LD discrimination). These methods, however, require many laborious procedures, including the use of a darkroom. Here, we demonstrate an innovative use of palladium compounds involving lower limits of detection and quantification of targeted live cells, fewer laborious procedures, lower costs, and potentially higher-throughput analysis than the use of EMA and PMA. We have also recently reported platinum compounds for LD discrimination, but platinum compounds carry costs that are 3 times higher because of the requirement for much larger amounts for LD discrimination than palladium compounds. Palladium compounds can penetrate dead (compromised) but not live bacteria and can be chelated primarily by chromosomal DNA and cell wall transmembrane proteins, with small amounts of DNA-binding proteins in vivo The new mechanism for palladium compounds is obviously different from that of platinum compounds, which primarily target DNA. Combining palladium compounds with PCR (Pd-PCR) in water resulted in discrimination between live and dead Enterobacteriaceae bacteria that was much clearer than that seen with the PMA method. Pd-PCR correlated with reference plating or with the currently used PMA-PCR method for pasteurized milk, based on EN ISO 16140:2003 validation. Pd-PCR enabled us to specifically detect and assay viable Enterobacteriaceae cells at concentrations of 5 to 10 CFU/ml in milk while following U.S./EU regulations after a 4.5-h process in a typical laboratory exposed to natural or electric light, as specified by U.S./EU regulations.IMPORTANCE Ethidium monoazide and propidium monoazide (EMA and PMA) facilitate the discrimination of live and dead bacteria (LD discrimination). These methods, however, require many laborious procedures, including the use of a darkroom. Here, we demonstrate an innovative use of palladium compounds involving fewer laborious procedures, lower costs, and potentially higher-throughput analysis than the use of EMA and PMA. We have also recently reported platinum compounds for LD discrimination, but platinum compounds carry costs that are 3 times higher because of the requirement for much larger amounts for LD discrimination than palladium compounds, which have also a novel reaction mechanism different from that of platinum compounds. In view of testing cost, palladium compounds are also very useful here compared with platinum compounds. Ultimately, the innovative Pd-PCR method may be also substituted for the currently used reference plating methods.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Entities:  

Year:  2016        PMID: 27663023      PMCID: PMC5103092          DOI: 10.1128/AEM.01613-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  30 in total

1.  Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells.

Authors:  Andreas Nocker; Ching-Ying Cheung; Anne K Camper
Journal:  J Microbiol Methods       Date:  2006-06-05       Impact factor: 2.363

Review 2.  Histone-like proteins and bacterial chromosome structure.

Authors:  D E Pettijohn
Journal:  J Biol Chem       Date:  1988-09-15       Impact factor: 5.157

3.  Post-PCR sterilization: a method to control carryover contamination for the polymerase chain reaction.

Authors:  G D Cimino; K C Metchette; J W Tessman; J E Hearst; S T Isaacs
Journal:  Nucleic Acids Res       Date:  1991-01-11       Impact factor: 16.971

4.  Innovative use of platinum compounds to selectively detect live microorganisms by polymerase chain reaction.

Authors:  Takashi Soejima; Jun-Ichi Minami; Jin-Zhong Xiao; Fumiaki Abe
Journal:  Biotechnol Bioeng       Date:  2015-08-19       Impact factor: 4.530

5.  Binding properties and stoichiometries of a palladium(II) complex to metallothioneins in vivo and in vitro.

Authors:  Q Zhang; W Zhong; B Xing; W Tang; Y Chen
Journal:  J Inorg Biochem       Date:  1998-12       Impact factor: 4.155

6.  Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples.

Authors:  Knut Rudi; Birgitte Moen; Signe Marie Drømtorp; Askild L Holck
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

7.  Photoactivated ethidium monoazide directly cleaves bacterial DNA and is applied to PCR for discrimination of live and dead bacteria.

Authors:  Takashi Soejima; Ken-ichiro Iida; Tian Qin; Hiroaki Taniai; Masanori Seki; Akemi Takade; Shin-ichi Yoshida
Journal:  Microbiol Immunol       Date:  2007       Impact factor: 1.955

8.  Palladium--a new inhibitor of cellulase activities.

Authors:  M D Shultz; J P Lassig; M G Gooch; B R Evans; J Woodward
Journal:  Biochem Biophys Res Commun       Date:  1995-04-26       Impact factor: 3.575

9.  Identification of a membrane glycoprotein overexpressed in murine lymphoma sublines resistant to cis-diamminedichloroplatinum(II).

Authors:  K Kawai; N Kamatani; E Georges; V Ling
Journal:  J Biol Chem       Date:  1990-08-05       Impact factor: 5.157

10.  A novel mechanism for direct real-time polymerase chain reaction that does not require DNA isolation from prokaryotic cells.

Authors:  Takashi Soejima; Jin-Zhong Xiao; Fumiaki Abe
Journal:  Sci Rep       Date:  2016-06-23       Impact factor: 4.379

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  3 in total

1.  A Novel Approach to the Viability Determination of Mycobacterium avium subsp. paratuberculosis Using Platinum Compounds in Combination With Quantitative PCR.

Authors:  Martina Cechova; Monika Beinhauerova; Vladimir Babak; Iva Slana; Petr Kralik
Journal:  Front Microbiol       Date:  2021-11-24       Impact factor: 5.640

2.  A viability assay combining palladium compound treatment with quantitative PCR to detect viable Mycobacterium avium subsp. paratuberculosis cells.

Authors:  Martina Cechova; Monika Beinhauerova; Vladimir Babak; Petr Kralik
Journal:  Sci Rep       Date:  2022-03-19       Impact factor: 4.379

3.  Discrimination of non-infectious SARS-CoV-2 particles from fomites by viability RT-qPCR.

Authors:  Enric Cuevas-Ferrando; Inés Girón-Guzmán; Irene Falcó; Alba Pérez-Cataluña; Azahara Díaz-Reolid; Rosa Aznar; Walter Randazzo; Gloria Sánchez
Journal:  Environ Res       Date:  2021-08-02       Impact factor: 6.498

  3 in total

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