Literature DB >> 27658261

Influence of gray level and space discretization on brain tumor heterogeneity measures obtained from magnetic resonance images.

David Molina1, Julián Pérez-Beteta2, Alicia Martínez-González2, Juan Martino3, Carlos Velásquez3, Estanislao Arana4, Víctor M Pérez-García2.   

Abstract

PURPOSE: Tumor heterogeneity in medical imaging is a current research trend due to its potential relationship with tumor malignancy. The aim of this study is to analyze the effect of dynamic range and matrix size changes on the results of different heterogeneity measures.
MATERIALS AND METHODS: Four patients harboring three glioblastomas and one metastasis were considered. Sixteen textural heterogeneity measures were computed for each patient, with a configuration including co-occurrence matrices (CM) features (local heterogeneity) and run-length matrices (RLM) features (regional heterogeneity). The coefficient of variation measured agreement between the textural measures in two types of experiments: (i) fixing the matrix size and changing the dynamic range and (ii) fixing the dynamic range and changing the matrix size.
RESULTS: None of the measures considered were robust under dynamic range changes. The CM Entropy and the RLM high gray-level run emphasis (HGRE) were the outstanding textural features due to their robustness under matrix size changes. Also, the RLM low gray-level run emphasis (LGRE) provided robust results when the dynamic range considered was sufficiently high (more than 8 levels). All of the remaining textural features were not robust.
CONCLUSION: Tumor texture studies based on images with different characteristics (e.g. multi-center studies) should first fix the dynamic range to be considered. For studies involving images of different resolutions either (i) only robust measures should be used (in our study CM entropy, RLM HGRE and/or RLM LGRE) or (ii) images should be resampled to match those of the lowest resolution before computing the textural features.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Brain tumors; Coefficient of variation; Feature robustness; Textural features; Tumor heterogeneity measures

Mesh:

Year:  2016        PMID: 27658261     DOI: 10.1016/j.compbiomed.2016.09.011

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  17 in total

1.  Relationship between Glioblastoma Heterogeneity and Survival Time: An MR Imaging Texture Analysis.

Authors:  Y Liu; X Xu; L Yin; X Zhang; L Li; H Lu
Journal:  AJNR Am J Neuroradiol       Date:  2017-06-29       Impact factor: 3.825

2.  Tumour heterogeneity in glioblastoma assessed by MRI texture analysis: a potential marker of survival.

Authors:  David Molina; Julián Pérez-Beteta; Belén Luque; Elena Arregui; Manuel Calvo; José M Borrás; Carlos López; Juan Martino; Carlos Velasquez; Beatriz Asenjo; Manuel Benavides; Ismael Herruzo; Alicia Martínez-González; Luis Pérez-Romasanta; Estanislao Arana; Víctor M Pérez-García
Journal:  Br J Radiol       Date:  2016-06-20       Impact factor: 3.039

3.  2D and 3D texture analysis to differentiate brain metastases on MR images: proceed with caution.

Authors:  Monika Béresová; Andrés Larroza; Estanislao Arana; József Varga; László Balkay; David Moratal
Journal:  MAGMA       Date:  2017-09-22       Impact factor: 2.310

4.  Radiomic features predict Ki-67 expression level and survival in lower grade gliomas.

Authors:  Yiming Li; Zenghui Qian; Kaibin Xu; Kai Wang; Xing Fan; Shaowu Li; Xing Liu; Yinyan Wang; Tao Jiang
Journal:  J Neurooncol       Date:  2017-09-12       Impact factor: 4.130

5.  Radiomics Repeatability Pitfalls in a Scan-Rescan MRI Study of Glioblastoma.

Authors:  Katharina V Hoebel; Jay B Patel; Andrew L Beers; Ken Chang; Praveer Singh; James M Brown; Marco C Pinho; Tracy T Batchelor; Elizabeth R Gerstner; Bruce R Rosen; Jayashree Kalpathy-Cramer
Journal:  Radiol Artif Intell       Date:  2020-12-16

6.  MRI Features May Predict Molecular Features of Glioblastoma in Isocitrate Dehydrogenase Wild-Type Lower-Grade Gliomas.

Authors:  C J Park; K Han; H Kim; S S Ahn; D Choi; Y W Park; J H Chang; S H Kim; S Cha; S-K Lee
Journal:  AJNR Am J Neuroradiol       Date:  2021-01-28       Impact factor: 3.825

7.  Prospective Evaluation of Repeatability and Robustness of Radiomic Descriptors in Healthy Brain Tissue Regions In Vivo Across Systematic Variations in T2-Weighted Magnetic Resonance Imaging Acquisition Parameters.

Authors:  Brendan Eck; Prathyush V Chirra; Avani Muchhala; Sophia Hall; Kaustav Bera; Pallavi Tiwari; Anant Madabhushi; Nicole Seiberlich; Satish E Viswanath
Journal:  J Magn Reson Imaging       Date:  2021-04-16       Impact factor: 5.119

8.  Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization.

Authors:  David Molina; Julián Pérez-Beteta; Alicia Martínez-González; Juan Martino; Carlos Velasquez; Estanislao Arana; Víctor M Pérez-García
Journal:  PLoS One       Date:  2017-06-06       Impact factor: 3.240

9.  Gray-level discretization impacts reproducible MRI radiomics texture features.

Authors:  Loïc Duron; Daniel Balvay; Saskia Vande Perre; Afef Bouchouicha; Julien Savatovsky; Jean-Claude Sadik; Isabelle Thomassin-Naggara; Laure Fournier; Augustin Lecler
Journal:  PLoS One       Date:  2019-03-07       Impact factor: 3.240

10.  Textural features and SUV-based variables assessed by dual time point 18F-FDG PET/CT in locally advanced breast cancer.

Authors:  Ana María Garcia-Vicente; David Molina; Julián Pérez-Beteta; Mariano Amo-Salas; Alicia Martínez-González; Gloria Bueno; María Jesús Tello-Galán; Ángel Soriano-Castrejón
Journal:  Ann Nucl Med       Date:  2017-09-08       Impact factor: 2.668

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