Literature DB >> 27655322

Diagnostic Accuracy of a Host Gene Expression Signature That Discriminates Clinical Severe Sepsis Syndrome and Infection-Negative Systemic Inflammation Among Critically Ill Children.

Jerry J Zimmerman1, Erin Sullivan, Thomas D Yager, Catherine Cheng, Lester Permut, Silvia Cermelli, Leo McHugh, Dayle Sampson, Therese Seldon, Richard B Brandon, Roslyn A Brandon.   

Abstract

OBJECTIVES: SeptiCyte Lab (Immunexpress, Seattle, WA), a molecular signature measuring the relative expression levels of four host messenger RNAs, was developed to discriminate critically ill adults with infection-positive versus infection-negative systemic inflammation. The objective was to assess the performance of Septicyte Lab in critically ill pediatric patients.
DESIGN: Prospective observational study.
SETTING: Pediatric and Cardiac ICUs, Seattle Children's Hospital, Seattle, WA. PATIENTS: A cohort of 40 children with clinically overt severe sepsis syndrome and 30 children immediately postcardiopulmonary bypass surgery was recruited. The clinically overt severe sepsis syndrome children had confirmed or highly suspected infection (microbial culture orders, antimicrobial prescription), two or more systemic inflammatory response syndrome criteria (including temperature and leukocyte criteria), and at least cardiovascular ± pulmonary organ dysfunction.
INTERVENTIONS: None (observational study only).
MEASUREMENTS AND MAIN RESULTS: Next-generation RNA sequencing was conducted on PAXgene blood RNA samples, successfully for 35 of 40 (87.5%) of the clinically overt severe sepsis syndrome patients and 29 of 30 (96.7%) of the postcardiopulmonary bypass patients. Forty patient samples (~ 60% of cohort) were reanalyzed by reverse transcription-quantitative polymerase chain reaction, to check for concordance with next-generation sequencing results. Postcardiopulmonary bypass versus clinically overt severe sepsis syndrome descriptors included the following: age, 7.3 ± 5.5 versus 9.0 ± 6.6 years; gender, 41% versus 49% male; Pediatric Risk of Mortality, version III, 7.0 ± 4.6 versus 8.7 ± 6.4; Pediatric Logistic Organ Dysfunction, version II, 5.1 ± 2.2 versus 4.8 ± 2.8. SeptiCyte Lab strongly differentiated postcardiopulmonary bypass and clinically overt severe sepsis syndrome patients by receiver operating characteristic curve analysis, with an area-under-curve value of 0.99 (95% CI, 0.96-1.00). Equivalent performance was found using reverse transcription-quantitative polymerase chain reaction. There was no significant correlation between the score produced by the SeptiCyte Lab test and measures of illness severity, immune compromise, or microbial culture status.
CONCLUSIONS: SeptiCyte Lab is able to discriminate clearly between clinically well-defined and homogeneous postcardiopulmonary bypass and clinically overt severe sepsis syndrome groups in children. A broader investigation among children with more heterogeneous inflammation-associated diagnoses and care settings is warranted.

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Year:  2017        PMID: 27655322     DOI: 10.1097/CCM.0000000000002100

Source DB:  PubMed          Journal:  Crit Care Med        ISSN: 0090-3493            Impact factor:   7.598


  11 in total

1.  Validation of a Host Response Assay, SeptiCyte LAB, for Discriminating Sepsis from Systemic Inflammatory Response Syndrome in the ICU.

Authors:  Russell R Miller; Bert K Lopansri; John P Burke; Mitchell Levy; Steven Opal; Richard E Rothman; Franco R D'Alessio; Venkataramana K Sidhaye; Neil R Aggarwal; Robert Balk; Jared A Greenberg; Mark Yoder; Gourang Patel; Emily Gilbert; Majid Afshar; Jorge P Parada; Greg S Martin; Annette M Esper; Jordan A Kempker; Mangala Narasimhan; Adey Tsegaye; Stella Hahn; Paul Mayo; Tom van der Poll; Marcus J Schultz; Brendon P Scicluna; Peter Klein Klouwenberg; Antony Rapisarda; Therese A Seldon; Leo C McHugh; Thomas D Yager; Silvia Cermelli; Dayle Sampson; Victoria Rothwell; Richard Newman; Shruti Bhide; Brian A Fox; James T Kirk; Krupa Navalkar; Roy F Davis; Roslyn A Brandon; Richard B Brandon
Journal:  Am J Respir Crit Care Med       Date:  2018-10-01       Impact factor: 21.405

Review 2.  Emerging Technologies for Molecular Diagnosis of Sepsis.

Authors:  Mridu Sinha; Julietta Jupe; Hannah Mack; Todd P Coleman; Shelley M Lawrence; Stephanie I Fraley
Journal:  Clin Microbiol Rev       Date:  2018-02-28       Impact factor: 26.132

3.  Association of Pathogen Type With Outcomes of Children Encountering Community-Acquired Pediatric Septic Shock.

Authors:  Derek Salud; Ron W Reeder; Russell K Banks; Kathleen L Meert; Robert A Berg; Athena Zuppa; Christopher J Newth; Mark W Hall; Michael Quasney; Anil Sapru; Joseph A Carcillo; Patrick S McQuillen; Peter M Mourani; James W Varni; Jerry J Zimmerman
Journal:  Pediatr Crit Care Med       Date:  2022-08-01       Impact factor: 3.971

Review 4.  New Molecular Diagnostic Approaches to Bacterial Infections and Antibacterial Resistance.

Authors:  Ephraim L Tsalik; Robert A Bonomo; Vance G Fowler
Journal:  Annu Rev Med       Date:  2018-01-29       Impact factor: 13.739

5.  Discriminating Bacterial and Viral Infection Using a Rapid Host Gene Expression Test.

Authors:  Ephraim L Tsalik; Ricardo Henao; Jesse L Montgomery; Jeff W Nawrocki; Mert Aydin; Emily C Lydon; Emily R Ko; Elizabeth Petzold; Bradly P Nicholson; Charles B Cairns; Seth W Glickman; Eugenia Quackenbush; Stephen F Kingsmore; Anja K Jaehne; Emanuel P Rivers; Raymond J Langley; Vance G Fowler; Micah T McClain; Robert J Crisp; Geoffrey S Ginsburg; Thomas W Burke; Andrew C Hemmert; Christopher W Woods
Journal:  Crit Care Med       Date:  2021-10-01       Impact factor: 9.296

6.  A Four-Biomarker Blood Signature Discriminates Systemic Inflammation Due to Viral Infection Versus Other Etiologies.

Authors:  D L Sampson; B A Fox; T D Yager; S Bhide; S Cermelli; L C McHugh; T A Seldon; R A Brandon; E Sullivan; J J Zimmerman; M Noursadeghi; R B Brandon
Journal:  Sci Rep       Date:  2017-06-06       Impact factor: 4.379

7.  Diagnostic Accuracy of Infection Markers to Diagnose Infections in Neonates and Children Receiving Extracorporeal Membrane Oxygenation.

Authors:  Irene Doo; Lukas P Staub; Adrian Mattke; Emma Haisz; Anna Lene Seidler; Nelson Alphonso; Luregn J Schlapbach
Journal:  Front Pediatr       Date:  2022-01-26       Impact factor: 3.418

8.  Prospective Validation of a Transcriptomic Metric in Severe Trauma.

Authors:  Steven L Raymond; Russell B Hawkins; Zhongkai Wang; Juan C Mira; Julie A Stortz; Feifei Han; Jennifer D Lanz; Laura V Hennessy; Babette A Brumback; Henry V Baker; Philip A Efron; Scott C Brakenridge; Wenzhong Xiao; Ronald G Tompkins; Joseph Cuschieri; Frederick A Moore; Ronald V Maier; Lyle L Moldawer
Journal:  Ann Surg       Date:  2020-05       Impact factor: 13.787

Review 9.  Direct-from-Specimen Pathogen Identification: Evolution of Syndromic Panels.

Authors:  Marc Roger Couturier; Jennifer Dien Bard
Journal:  Clin Lab Med       Date:  2019-09       Impact factor: 1.935

Review 10.  Differential Markers of Bacterial and Viral Infections in Children for Point-of-Care Testing.

Authors:  Yu-Ting Tsao; Yao-Hung Tsai; Wan-Ting Liao; Ching-Ju Shen; Ching-Fen Shen; Chao-Min Cheng
Journal:  Trends Mol Med       Date:  2020-09-29       Impact factor: 11.951

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