Literature DB >> 27645899

Characteristics of Genome Editing Mutations in Cereal Crops.

Changfu Zhu1, Luisa Bortesi2, Can Baysal1, Richard M Twyman3, Rainer Fischer4, Teresa Capell1, Stefan Schillberg5, Paul Christou6.   

Abstract

Designer nucleases allow the creation of new plant genotypes by introducing precisely-targeted double-strand breaks that are resolved by endogenous repair pathways. The major nuclease technologies are meganucleases, zinc-finger nucleases, transcription activator-like effector nucleases, and the CRISPR/Cas9 system. Each comprises a promiscuous endonuclease guided by protein-DNA or RNA-DNA interactions. A great deal is known about the principles of designer nucleases but much remains to be learned about their detailed behavioral characteristics in different plant species. The outcome of genome engineering reflects the intrinsic properties of each nuclease and target genome, causing variations in efficiency, accuracy, and mutation structure. In this article, we critically discuss the activities of designer nucleases in different cereals representing a broad range of genome characteristics.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Keywords:  clustered regularly interspaced short palindromic repeats (CRISPRs); designer nuclease; meganuclease; plant genome editing; targeted mutation; transcription activator-like effector nucleases (TALENs); zinc-finger endonucleases (ZFNs)

Mesh:

Year:  2016        PMID: 27645899     DOI: 10.1016/j.tplants.2016.08.009

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  44 in total

Review 1.  CRISPR/Cas systems: opportunities and challenges for crop breeding.

Authors:  Sukumar Biswas; Dabing Zhang; Jianxin Shi
Journal:  Plant Cell Rep       Date:  2021-05-11       Impact factor: 4.570

Review 2.  Fruit crops in the era of genome editing: closing the regulatory gap.

Authors:  Derry Alvarez; Pedro Cerda-Bennasser; Evan Stowe; Fabiola Ramirez-Torres; Teresa Capell; Amit Dhingra; Paul Christou
Journal:  Plant Cell Rep       Date:  2021-01-30       Impact factor: 4.570

3.  CRISPR/Cas9-induced monoallelic mutations in the cytosolic AGPase large subunit gene APL2 induce the ectopic expression of APL2 and the corresponding small subunit gene APS2b in rice leaves.

Authors:  Lucía Pérez; Erika Soto; Gemma Villorbina; Ludovic Bassie; Vicente Medina; Pilar Muñoz; Teresa Capell; Changfu Zhu; Paul Christou; Gemma Farré
Journal:  Transgenic Res       Date:  2018-08-11       Impact factor: 2.788

Review 4.  Genome-editing in millets: current knowledge and future perspectives.

Authors:  Antony Ceasar
Journal:  Mol Biol Rep       Date:  2021-11-26       Impact factor: 2.316

5.  Mapping QTLs for yield and photosynthesis-related traits in three consecutive backcross populations of Oryza sativa cultivar Cottondora Sannalu (MTU1010) and Oryza rufipogon.

Authors:  Venkateswara Rao Yadavalli; Divya Balakrishnan; Malathi Surapaneni; Krishnamraju Addanki; Sukumar Mesapogu; Kavitha Beerelli; Subrahmanyam Desiraju; Sitapati Rao Voleti; Sarla Neelamraju
Journal:  Planta       Date:  2022-09-07       Impact factor: 4.540

6.  Targeting of Photoreceptor Genes in Chlamydomonas reinhardtii via Zinc-Finger Nucleases and CRISPR/Cas9.

Authors:  Andre Greiner; Simon Kelterborn; Heide Evers; Georg Kreimer; Irina Sizova; Peter Hegemann
Journal:  Plant Cell       Date:  2017-10-04       Impact factor: 11.277

7.  Development of methods for effective identification of CRISPR/Cas9-induced indels in rice.

Authors:  Sukumar Biswas; Rong Li; Zheng Yuan; Dabing Zhang; Xiangxiang Zhao; Jianxin Shi
Journal:  Plant Cell Rep       Date:  2019-02-19       Impact factor: 4.570

8.  CRISPR/Cas9 mutations in the rice Waxy/GBSSI gene induce allele-specific and zygosity-dependent feedback effects on endosperm starch biosynthesis.

Authors:  Lucía Pérez; Erika Soto; Gemma Farré; Julia Juanos; Gemma Villorbina; Ludovic Bassie; Vicente Medina; Antonio Jesús Serrato; Mariam Sahrawy; Jose Antonio Rojas; Ignacio Romagosa; Pilar Muñoz; Changfu Zhu; Paul Christou
Journal:  Plant Cell Rep       Date:  2019-02-04       Impact factor: 4.570

Review 9.  Modification of cereal plant architecture by genome editing to improve yields.

Authors:  Xin Huang; Julia Hilscher; Eva Stoger; Paul Christou; Changfu Zhu
Journal:  Plant Cell Rep       Date:  2021-02-09       Impact factor: 4.570

Review 10.  Next Generation Cereal Crop Yield Enhancement: From Knowledge of Inflorescence Development to Practical Engineering by Genome Editing.

Authors:  Lei Liu; Penelope L Lindsay; David Jackson
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

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