Literature DB >> 27638947

Molecular Diagnostic Field Test for Point-of-Care Detection of Ebola Virus Directly From Blood.

Jason W Benzine1, Kerry M Brown1, Krystle N Agans2, Ronald Godiska1, Chad E Mire2, Krishne Gowda1, Brandon Converse1, Thomas W Geisbert2, David A Mead1, Yogesh Chander1.   

Abstract

A molecular diagnostic method for robust detection of Ebola virus (EBOV) at the point of care (POC) directly from blood samples is described. This assay is based on reverse transcriptase loop-mediated isothermal amplification (RT-LAMP) of the glycoprotein gene of EBOV. Complete reaction formulations were lyophilized in 0.2-mL polymerase chain reaction tubes. RT-LAMP reactions were performed on a battery-operated isothermal instrument. Limit of detection of this RT-LAMP assay was 2.8 × 102 plaque-forming units (PFU)/test and 1 × 103 PFU/test within 40 minutes for EBOV-Kikwit and EBOV-Makona, respectively. This assay was found to be specific for the detection of EBOV, as no nonspecific amplification was detected in blood samples spiked with closely related viruses and other pathogens. These results showed that this diagnostic test can be used at the point of care for rapid and specific detection of EBOV directly from blood with high sensitivity within 40 minutes.
© The Author 2016. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com.

Entities:  

Keywords:  Ebola virus; RT-LAMP; diagnostic test; isothermal amplification; point of care

Mesh:

Substances:

Year:  2016        PMID: 27638947      PMCID: PMC5050483          DOI: 10.1093/infdis/jiw330

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  23 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  The Neglected Dimension of Global Security--A Framework for Countering Infectious-Disease Crises.

Authors:  Peter Sands; Carmen Mundaca-Shah; Victor J Dzau
Journal:  N Engl J Med       Date:  2016-01-13       Impact factor: 91.245

3.  Development and evaluation of a fluorogenic 5' nuclease assay to detect and differentiate between Ebola virus subtypes Zaire and Sudan.

Authors:  T R Gibb; D A Norwood; N Woollen; E A Henchal
Journal:  J Clin Microbiol       Date:  2001-11       Impact factor: 5.948

Review 4.  Viral Hemorrhagic Fever Diagnostics.

Authors:  Lori D Racsa; Colleen S Kraft; Gene G Olinger; Lisa E Hensley
Journal:  Clin Infect Dis       Date:  2015-09-09       Impact factor: 9.079

5.  ReEBOV Antigen Rapid Test kit for point-of-care and laboratory-based testing for Ebola virus disease: a field validation study.

Authors:  Mara Jana Broadhurst; John Daniel Kelly; Ann Miller; Amanda Semper; Daniel Bailey; Elisabetta Groppelli; Andrew Simpson; Tim Brooks; Susan Hula; Wilfred Nyoni; Alhaji B Sankoh; Santigi Kanu; Alhaji Jalloh; Quy Ton; Nicholas Sarchet; Peter George; Mark D Perkins; Betsy Wonderly; Megan Murray; Nira R Pollock
Journal:  Lancet       Date:  2015-06-25       Impact factor: 79.321

6.  Helicase-dependent isothermal DNA amplification.

Authors:  Myriam Vincent; Yan Xu; Huimin Kong
Journal:  EMBO Rep       Date:  2004-07-09       Impact factor: 8.807

7.  Visual detection of Ebola virus using reverse transcription loop-mediated isothermal amplification combined with nucleic acid strip detection.

Authors:  Changping Xu; Hualei Wang; Hongli Jin; Na Feng; Xuexing Zheng; Zengguo Cao; Ling Li; Jianzhong Wang; Feihu Yan; Lina Wang; Hang Chi; Weiwei Gai; Chong Wang; Yongkun Zhao; Yan Feng; Tiecheng Wang; Yuwei Gao; Yiyu Lu; Songtao Yang; Xianzhu Xia
Journal:  Arch Virol       Date:  2016-01-30       Impact factor: 2.574

8.  The Case for Improved Diagnostic Tools to Control Ebola Virus Disease in West Africa and How to Get There.

Authors:  Arlene C Chua; Jane Cunningham; Francis Moussy; Mark D Perkins; Pierre Formenty
Journal:  PLoS Negl Trop Dis       Date:  2015-06-11

9.  Lipid nanoparticle siRNA treatment of Ebola-virus-Makona-infected nonhuman primates.

Authors:  Emily P Thi; Chad E Mire; Amy C H Lee; Joan B Geisbert; Joy Z Zhou; Krystle N Agans; Nicholas M Snead; Daniel J Deer; Trisha R Barnard; Karla A Fenton; Ian MacLachlan; Thomas W Geisbert
Journal:  Nature       Date:  2015-04-22       Impact factor: 49.962

10.  A novel thermostable polymerase for RNA and DNA loop-mediated isothermal amplification (LAMP).

Authors:  Yogesh Chander; Jim Koelbl; Jamie Puckett; Michael J Moser; Audrey J Klingele; Mark R Liles; Abel Carrias; David A Mead; Thomas W Schoenfeld
Journal:  Front Microbiol       Date:  2014-08-01       Impact factor: 5.640

View more
  12 in total

1.  Rapid, Safe, and Simple Manual Bedside Nucleic Acid Extraction for the Detection of Virus in Whole Blood Samples.

Authors:  Maiken W Rosenstierne; Christopher E Jensen; Anders Fomsgaard
Journal:  J Vis Exp       Date:  2018-06-30       Impact factor: 1.355

Review 2.  Point of care testing for infectious diseases.

Authors:  Hui Chen; Kengku Liu; Zhao Li; Ping Wang
Journal:  Clin Chim Acta       Date:  2019-03-08       Impact factor: 3.786

3.  A Multifunctional Reactor with Dry-Stored Reagents for Enzymatic Amplification of Nucleic Acids.

Authors:  Jinzhao Song; Changchun Liu; Michael G Mauk; Jing Peng; Thomas Schoenfeld; Haim H Bau
Journal:  Anal Chem       Date:  2017-12-22       Impact factor: 6.986

4.  Microfluidic System for Detection of Viral RNA in Blood Using a Barcode Fluorescence Reporter and a Photocleavable Capture Probe.

Authors:  Ke Du; Myeongkee Park; Anthony Griffiths; Ricardo Carrion; Jean Patterson; Holger Schmidt; Richard Mathies
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

Review 5.  The current landscape of nucleic acid tests for filovirus detection.

Authors:  David J Clark; John Tyson; Andrew D Sails; Sanjeev Krishna; Henry M Staines
Journal:  J Clin Virol       Date:  2018-03-22       Impact factor: 3.168

6.  Fast and Parallel Detection of Four Ebola Virus Species on a Microfluidic-Chip-Based Portable Reverse Transcription Loop-Mediated Isothermal Amplification System.

Authors:  Xue Lin; Xiangyu Jin; Bin Xu; Ruliang Wang; Rongxin Fu; Ya Su; Kai Jiang; Han Yang; Ying Lu; Yong Guo; Guoliang Huang
Journal:  Micromachines (Basel)       Date:  2019-11-14       Impact factor: 2.891

Review 7.  Advances in Directly Amplifying Nucleic Acids from Complex Samples.

Authors:  Faye M Walker; Kuangwen Hsieh
Journal:  Biosensors (Basel)       Date:  2019-09-30

Review 8.  CRISPR-Cas systems for diagnosing infectious diseases.

Authors:  Anastasiya Kostyusheva; Sergey Brezgin; Yurii Babin; Irina Vasilyeva; Dieter Glebe; Dmitry Kostyushev; Vladimir Chulanov
Journal:  Methods       Date:  2021-04-09       Impact factor: 4.647

9.  Field-deployable, quantitative, rapid identification of active Ebola virus infection in unprocessed blood.

Authors:  Kavit Shah; Emma Bentley; Adam Tyler; Kevin S R Richards; Edward Wright; Linda Easterbrook; Diane Lee; Claire Cleaver; Louise Usher; Jane E Burton; James K Pitman; Christine B Bruce; David Edge; Martin Lee; Nelson Nazareth; David A Norwood; Sterghios A Moschos
Journal:  Chem Sci       Date:  2017-09-25       Impact factor: 9.825

10.  A flexible format LAMP assay for rapid detection of Ebola virus.

Authors:  Laura C Bonney; Robert J Watson; Gillian S Slack; Andrew Bosworth; Nadina I Vasileva Wand; Roger Hewson
Journal:  PLoS Negl Trop Dis       Date:  2020-07-31
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.