Literature DB >> 27633714

A Chemoenzymatic Strategy for Imaging Cellular Phosphatidic Acid Synthesis.

Timothy W Bumpus1, Jeremy M Baskin2.   

Abstract

Phosphatidic acid (PA) is a potent lipid secondary messenger, the synthesis of which is tightly regulated in both space and time. Established tools for detecting PA involve ex vivo analysis and do not provide information on the subcellular locations where this lipid is synthesized. Here, a chemoenzymatic strategy for imaging sites of cellular PA synthesis by phospholipase D (PLD) enzymes is reported. PLDs were found to be able to catalyze phospholipid head-group exchange with alkynols to generate alkyne-labeled PA analogues within cells. Subsequent fluorophore tagging through Cu-catalyzed azide-alkyne cycloaddition enabled both visualization by fluorescence microscopy and quantification by HPLC. Our studies revealed several intracellular sites of PLD-mediated PA synthesis. We envision applications of this approach to dissect PA-dependent signaling pathways, image PLD activity in disease, and remodel intracellular membranes with new functionality.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  click chemistry; hydrolases; imaging agents; phosphatidic acid; phospholipids

Mesh:

Substances:

Year:  2016        PMID: 27633714      PMCID: PMC5153663          DOI: 10.1002/anie.201607443

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  17 in total

Review 1.  Membrane recognition by phospholipid-binding domains.

Authors:  Mark A Lemmon
Journal:  Nat Rev Mol Cell Biol       Date:  2008-02       Impact factor: 94.444

Review 2.  Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.

Authors:  Robert H Newman; Matthew D Fosbrink; Jin Zhang
Journal:  Chem Rev       Date:  2011-04-01       Impact factor: 60.622

Review 3.  Phospholipase D: enzymology, functionality, and chemical modulation.

Authors:  Paige E Selvy; Robert R Lavieri; Craig W Lindsley; H Alex Brown
Journal:  Chem Rev       Date:  2011-09-22       Impact factor: 60.622

Review 4.  Mammalian phospholipase D physiological and pathological roles.

Authors:  X Peng; M A Frohman
Journal:  Acta Physiol (Oxf)       Date:  2011-05-28       Impact factor: 6.311

Review 5.  Physiological and pathophysiological roles for phospholipase D.

Authors:  Rochelle K Nelson; Michael A Frohman
Journal:  J Lipid Res       Date:  2015-04-29       Impact factor: 5.922

6.  Genetically encoded probes for phosphatidic acid.

Authors:  Nawal Kassas; Petra Tryoen-Tóth; Matthias Corrotte; Tamou Thahouly; Marie-France Bader; Nancy J Grant; Nicolas Vitale
Journal:  Methods Cell Biol       Date:  2012       Impact factor: 1.441

7.  Biochemical analysis of phospholipase D.

Authors:  H Alex Brown; Lee G Henage; Anita M Preininger; Yun Xiang; John H Exton
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

Review 8.  Measurement of G protein-coupled receptor-stimulated phospholipase D activity in intact cells.

Authors:  Stephanie J Walker; H Alex Brown
Journal:  Methods Mol Biol       Date:  2004

Review 9.  Phospholipase D.

Authors:  Mark McDermott; Michael J O Wakelam; Andrew J Morris
Journal:  Biochem Cell Biol       Date:  2004-02       Impact factor: 3.626

Review 10.  Chemical reporters for biological discovery.

Authors:  Markus Grammel; Howard C Hang
Journal:  Nat Chem Biol       Date:  2013-08       Impact factor: 15.040

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  12 in total

1.  Labeling of Phosphatidylinositol Lipid Products in Cells through Metabolic Engineering by Using a Clickable myo-Inositol Probe.

Authors:  Tanei J Ricks; Chelsi D Cassilly; Adam J Carr; Daiane S Alves; Shahrina Alam; Kathrin Tscherch; Timothy W Yokley; Cameron E Workman; Jennifer L Morrell-Falvey; Francisco N Barrera; Todd B Reynolds; Michael D Best
Journal:  Chembiochem       Date:  2018-10-17       Impact factor: 3.164

2.  Getting a Grip on Greasy Molecules.

Authors:  Timothy W Bumpus; Jeremy M Baskin
Journal:  Trends Biochem Sci       Date:  2019-04-23       Impact factor: 13.807

3.  Ex Uno Plura: Differential Labeling of Phospholipid Biosynthetic Pathways with a Single Bioorthogonal Alcohol.

Authors:  Timothy W Bumpus; Felice J Liang; Jeremy M Baskin
Journal:  Biochemistry       Date:  2017-11-08       Impact factor: 3.162

4.  Meeting Proceedings, 2017 Cornell University Baker Symposium-Quo Vadis: The Boundless Trajectories of Chemical Biology.

Authors:  Jeremy M Baskin; Yimon Aye
Journal:  Biochemistry       Date:  2017-05-30       Impact factor: 3.162

5.  A real-time, click chemistry imaging approach reveals stimulus-specific subcellular locations of phospholipase D activity.

Authors:  Dongjun Liang; Kane Wu; Reika Tei; Timothy W Bumpus; Johnny Ye; Jeremy M Baskin
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-16       Impact factor: 11.205

6.  Click chemistry-enabled CRISPR screening reveals GSK3 as a regulator of PLD signaling.

Authors:  Timothy W Bumpus; Shiying Huang; Reika Tei; Jeremy M Baskin
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-30       Impact factor: 11.205

Review 7.  Tracing Lipid Metabolism by Alkyne Lipids and Mass Spectrometry: The State of the Art.

Authors:  Lars Kuerschner; Christoph Thiele
Journal:  Front Mol Biosci       Date:  2022-05-20

Review 8.  Lipids: chemical tools for their synthesis, modification, and analysis.

Authors:  Judith Flores; Brittany M White; Roberto J Brea; Jeremy M Baskin; Neal K Devaraj
Journal:  Chem Soc Rev       Date:  2020-07-21       Impact factor: 54.564

Review 9.  Metabolic labeling of glycerophospholipids via clickable analogs derivatized at the lipid headgroup.

Authors:  Christelle F Ancajas; Tanei J Ricks; Michael D Best
Journal:  Chem Phys Lipids       Date:  2020-09-06       Impact factor: 3.329

10.  Clickable Substrate Mimics Enable Imaging of Phospholipase D Activity.

Authors:  Timothy W Bumpus; Jeremy M Baskin
Journal:  ACS Cent Sci       Date:  2017-10-04       Impact factor: 14.553

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