| Literature DB >> 27627888 |
Lorna J Smith1, Wilfred F van Gunsteren2, Niels Hansen3.
Abstract
Deriving molecular structure from [Formula: see text]-couplings obtained from NMR experiments is a challenge due to (1) the uncertainty in the Karplus relation [Formula: see text] connecting a [Formula: see text]-coupling value to a torsional angle [Formula: see text], (2) the need to account for the averaging inherent to the measurement of [Formula: see text]-couplings, and (3) the sampling road blocks that may emerge due to the multiple-valuedness of the inverse function [Formula: see text] of the function [Formula: see text]. Ways to properly handle these issues in structure refinement of biomolecules are discussed and illustrated using the protein hen egg white lysozyme as example.Keywords: Conformational dynamics; Force field; Nuclear magnetic resonance; Statistical mechanics; Structure refinement
Mesh:
Year: 2016 PMID: 27627888 DOI: 10.1007/s10858-016-0058-5
Source DB: PubMed Journal: J Biomol NMR ISSN: 0925-2738 Impact factor: 2.835