Literature DB >> 27626947

Towards Translation of Discrete Frequency Infrared Spectroscopic Imaging for Digital Histopathology of Clinical Biopsy Samples.

Saumya Tiwari1, Jai Raman2, Vijaya Reddy3, Andrew Ghetler4, Richard P Tella4, Yang Han4, Christopher R Moon4, Charles D Hoke4, Rohit Bhargava1,5.   

Abstract

Fourier transform infrared (FT-IR) spectroscopic imaging has been widely tested as a tool for stainless digital histology of biomedical specimens, including for the identification of infiltration and fibrosis in endomyocardial biopsy samples to assess transplant rejection. A major barrier in clinical translation has been the slow speed of imaging. To address this need, we tested and report here the viability of using high speed discrete frequency infrared (DFIR) imaging to obtain stain-free biochemical imaging in cardiovascular samples collected from patients. Images obtained by this method were classified with high accuracy by a Bayesian classification algorithm trained on FT-IR imaging data as well as on DFIR data. A single spectral feature correlated with instances of fibrosis, as identified by the pathologist, highlights the advantage of the DFIR imaging approach for rapid detection. The speed of digital pathologic recognition was at least 16 times faster than the fastest FT-IR imaging instrument. These results indicate that a fast, on-site identification of fibrosis using IR imaging has potential for real time assistance during surgeries. Further, the work describes development and applications of supervised classifiers on DFIR imaging data, comparing classifiers developed on FT-IR and DFIR imaging modalities and identifying specific spectral features for accurate identification of fibrosis. This addresses a topic of much debate on the use of training data and cross-modality validity of IR measurements. Together, the work is a step toward addressing a clinical diagnostic need at acquisition time scales that make IR imaging technology practical for medical use.

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Year:  2016        PMID: 27626947     DOI: 10.1021/acs.analchem.6b02754

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  13 in total

1.  Volumetric stimulated Raman scattering imaging of cleared tissues towards three-dimensional chemical histopathology.

Authors:  Junjie Li; Peng Lin; Yuying Tan; Ji-Xin Cheng
Journal:  Biomed Opt Express       Date:  2019-08-01       Impact factor: 3.732

Review 2.  Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences.

Authors:  Tomasz P Wrobel; Rohit Bhargava
Journal:  Anal Chem       Date:  2018-02-06       Impact factor: 6.986

3.  Multicolor Discrete Frequency Infrared Spectroscopic Imaging.

Authors:  Kevin Yeh; Dongkwan Lee; Rohit Bhargava
Journal:  Anal Chem       Date:  2019-01-16       Impact factor: 6.986

4.  A comparison of mid-infrared spectral regions on accuracy of tissue classification.

Authors:  Shachi Mittal; Rohit Bhargava
Journal:  Analyst       Date:  2019-04-08       Impact factor: 4.616

Review 5.  Infrared spectroscopic imaging: Label-free biochemical analysis of stroma and tissue fibrosis.

Authors:  Shaiju S Nazeer; Hari Sreedhar; Vishal K Varma; David Martinez-Marin; Christine Massie; Michael J Walsh
Journal:  Int J Biochem Cell Biol       Date:  2017-09-06       Impact factor: 5.085

6.  Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging.

Authors:  Elizabeth K Neumann; Troy J Comi; Nicolas Spegazzini; Jennifer W Mitchell; Stanislav S Rubakhin; Martha U Gillette; Rohit Bhargava; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2018-09-19       Impact factor: 6.986

7.  All-digital histopathology by infrared-optical hybrid microscopy.

Authors:  Martin Schnell; Shachi Mittal; Kianoush Falahkheirkhah; Anirudh Mittal; Kevin Yeh; Seth Kenkel; Andre Kajdacsy-Balla; P Scott Carney; Rohit Bhargava
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-03       Impact factor: 11.205

8.  Colon Cancer Grading Using Infrared Spectroscopic Imaging-Based Deep Learning.

Authors:  Saumya Tiwari; Kianoush Falahkheirkhah; Georgina Cheng; Rohit Bhargava
Journal:  Appl Spectrosc       Date:  2022-03-25       Impact factor: 3.588

9.  Identification of Skin Electrical Injury Using Infrared Imaging: A Possible Complementary Tool for Histological Examination.

Authors:  Ji Zhang; Wei Lin; Hancheng Lin; Zhenyuan Wang; Hongmei Dong
Journal:  PLoS One       Date:  2017-01-24       Impact factor: 3.240

10.  Spectroscopic imaging of biomaterials and biological systems with FTIR microscopy or with quantum cascade lasers.

Authors:  James A Kimber; Sergei G Kazarian
Journal:  Anal Bioanal Chem       Date:  2017-08-29       Impact factor: 4.142

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