| Literature DB >> 27621802 |
Vincent Amoah1, Benjamin Wrigley1, Eric Holroyd1, Andrew Smallwood1, Angel L Armesilla2, Alan Nevill3, James Cotton1.
Abstract
INTRODUCTION: We evaluated the association between two single nucleotide polymorphisms of the vascular endothelial growth factor gene and one of the hypoxia-inducible factor-1α gene and the degree of coronary collateral formation in patients with a coronary chronic total occlusion.Entities:
Keywords: Cardiovascular; Rentrop grade; chronic total occlusion; gene polymorphism; hypoxia-inducible factor-1α; polymerase chain reaction; vascular endothelial growth factor
Year: 2016 PMID: 27621802 PMCID: PMC5006805 DOI: 10.1177/2050312116654403
Source DB: PubMed Journal: SAGE Open Med ISSN: 2050-3121
Polymerase chain reaction primer pairs, reaction conditions and restriction enzymes used for each polymorphism.
| Sequence polymorphism | Primer sequence | PCR product size (bp) | PCR annealing temperature (°C) | Restriction enzyme site | Alleles | DNA fragment sizes (bp) |
|---|---|---|---|---|---|---|
| −152G>A | F-5′-TCCTGCTCCCTCCTCGCCAATG-3′ | 204 | 62 | Dde1 | G | 143, 61 |
| −165C>T | Same as for −152G>A | 204 | 62 | BstN1 | C | 130, 74 |
| −1772C>T | F-5′-GCTGAAGACACAGAAGCAAAGAAC-3′ | 467 | 57 | Hph1 | C | 251, 216 |
PCR: polymerase chain reaction.
Baseline characteristics of patients.
| Characteristic | All ( | Group 1 ( | Group 2 ( |
|
|---|---|---|---|---|
| Age (mean±SD), years | 65.3±10.7 | 65.6±6.6 | 65.6±10.9 | 1 |
| Sex, | ||||
| Male/female | 82/16 (84/16) | 9/2 (82/18) | 73/14 (84/16) | 1 |
| Risk factors, | ||||
| Familial history of CAD | 39 (38) | 6 (55) | 33 (38) | 0.337 |
| Hypertension | 57 (58) | 7 (64) | 50 (57) | 0.757 |
| Diabetes mellitus | 35 (36) | 6 (55) | 29 (33) | 0.192 |
| Ex-smoker | 37 (38) | 6 (55) | 31 (36) | 0.323 |
| Current smoker | 20 (20) | 2 (18) | 18 (21) | 1 |
| Hyperlipidaemia | 53 (54) | 9 (82) | 44 (51) | 0.060 |
| Previous MI | 29 (30) | 3 (27) | 26 (30) | 1 |
| Previous PCI | 9 (9) | 4 (36) | 5 (6) | 0.008 |
| Previous CABG | 0 (0) | 0 (0) | 0 (0) | 1 |
| Previous TIA/CVA | 3 (3) | 1 (9) | 2 (2) | 0.303 |
CAD: coronary artery disease; SD: standard deviation; PCI: percutaneous coronary intervention;TIA/CVA: /transient ischaemic attack/cerebrovascular accident; MI: myocardial infarction; CABG: coronary artery bypass graft.
Variables associated with enhanced collateral vessel formation.
| Variable | |
|---|---|
| Previous PCI | 0.004 |
| Previous TIA/CVA | 0.021 |
TIA/CVA: transient ischaemic attack/cerebrovascular accident; PCI: percutaneous coronary intervention.
Genotype distribution of VEGF and HIF-1 gene polymorphisms in patients according to Rentrop grade.
| Sequence polymorphism | Genotype | Rentrop grade | ||||
|---|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | |||
| −152G>A | GG | 2 | 1 | 8 | 26 | |
| GA | 0 | 4 | 11 | 26 | 0.151 | |
| AA | 0 | 4 | 2 | 14 | ||
| −165C>T | CC | 1 | 6 | 12 | 42 | |
| CT | 1 | 3 | 9 | 24 | 0.921 | |
| TT | 0 | 0 | 0 | 0 | ||
| −1772C>T | CC | 0 | 0 | 0 | 0 | |
| CT | 1 | 4 | 9 | 22 | 0.789 | |
| TT | 1 | 5 | 12 | 44 | ||
VEGF: vascular endothelial growth factor; HIF-1: hypoxia-inducible factor-1.
Genotype distribution of VEGF and HIF-1 gene polymorphisms in patients according to CC grade.
| Sequence polymorphism | Genotype | Collateral connection grade | |||
|---|---|---|---|---|---|
| 0 | 1 | 2 | |||
| −152G>A | GG | 11 | 20 | 5 | |
| GA | 12 | 21 | 5 | 0.847 | |
| AA | 9 | 10 | 2 | ||
| −165C>T | CC | 15 | 36 | 7 | |
| CT | 17 | 17 | 6 | 0.147 | |
| TT | 0 | 0 | 0 | ||
| −1772C>T | CC | 0 | 0 | 0 | |
| CT | 9 | 23 | 3 | 0.216 | |
| TT | 23 | 30 | 10 | ||
VEGF: vascular endothelial growth factor; HIF-1: hypoxia-inducible factor-1.