Literature DB >> 27619166

Detection of single cell heterogeneity in cancer.

Mengjia Qian1, Diane C Wang2, Hao Chen3, Yunfeng Cheng4.   

Abstract

Single cell heterogeneity has already been highlighted in cancer classification, diagnosis, and treatment. Recent advanced technologies have gained more ability to reveal the heterogeneity on single cell level. In this review, we listed various detection targets applied in single cell study, including tumor tissue cells, circulating tumor cells (CTCs), disseminated tumor cells (DTCs), circulating tumor DNA (ctDNA), cell-free DNA (cfDNA), and cancer stem cells (CSCs). We further discussed and compared detection methods using these detection targets in different fields to reveal single cell heterogeneity in cancer. We focused not only on the methods that have already been established and validated, but also on newly developed methods. In morphology and phenotype, the methods mainly included cell imaging and immune-staining. In genomics and proteomics, the main methods were single cell sequencing and single cell western blotting. Collectively, from using these methods, we can have a better understanding of the single cell variation, as well as what kind of variation it is and how the variation works. Our observations imply that study on single cell heterogeneity in cancer is an important step to precision medicine. The development of technologies in detection of single cell heterogeneity will be sure to improve the diagnosis and treatment in cancer.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Genomics; Precision medicine; Proteomics; Single cell heterogeneity

Mesh:

Substances:

Year:  2016        PMID: 27619166     DOI: 10.1016/j.semcdb.2016.09.003

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  15 in total

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Authors:  Sarah A Hayes; Stephen Clarke; Nick Pavlakis; Viive M Howell
Journal:  Mamm Genome       Date:  2018-07-25       Impact factor: 2.957

2.  Single-cell heterogeneity in Sézary syndrome.

Authors:  Terkild Brink Buus; Andreas Willerslev-Olsen; Simon Fredholm; Edda Blümel; Claudia Nastasi; Maria Gluud; Tengpeng Hu; Lise M Lindahl; Lars Iversen; Hanne Fogh; Robert Gniadecki; Ivan V Litvinov; Jenny L Persson; Charlotte Menné Bonefeld; Carsten Geisler; Jan Pravsgaard Christensen; Thorbjørn Krejsgaard; Thomas Litman; Anders Woetmann; Niels Ødum
Journal:  Blood Adv       Date:  2018-08-28

3.  Single Cell Proteomics by Data-Independent Acquisition To Study Embryonic Asymmetry in Xenopus laevis.

Authors:  Anumita Saha-Shah; Melody Esmaeili; Simone Sidoli; Hyojeong Hwang; Jing Yang; Peter S Klein; Benjamin A Garcia
Journal:  Anal Chem       Date:  2019-06-27       Impact factor: 6.986

4.  Effects of culture condition on epigenomic profiles of brain tumor cells.

Authors:  Megan C Cox; Chengyu Deng; Lynette B Naler; Chang Lu; Scott S Verbridge
Journal:  ACS Biomater Sci Eng       Date:  2019-02-07

5.  Genetic Hallmarks and Heterogeneity of Glioblastoma in the Single-Cell Omics Era.

Authors:  Andrea Degl'Innocenti; Nicoletta di Leo; Gianni Ciofani
Journal:  Adv Ther (Weinh)       Date:  2019-12-01

Review 6.  The evolving concept of liver cancer stem cells.

Authors:  Kouki Nio; Taro Yamashita; Shuichi Kaneko
Journal:  Mol Cancer       Date:  2017-01-30       Impact factor: 27.401

Review 7.  Tumorigenesis as a process of gradual loss of original cell identity and gain of properties of neural precursor/progenitor cells.

Authors:  Ying Cao
Journal:  Cell Biosci       Date:  2017-11-07       Impact factor: 7.133

Review 8.  Modeling the process of human tumorigenesis.

Authors:  Sneha Balani; Long V Nguyen; Connie J Eaves
Journal:  Nat Commun       Date:  2017-05-25       Impact factor: 14.919

Review 9.  Advances of single-cell genomics and epigenomics in human disease: where are we now?

Authors:  Rizqah Kamies; Celia P Martinez-Jimenez
Journal:  Mamm Genome       Date:  2020-04-08       Impact factor: 2.957

10.  Investigation of appropriate pre-analytical procedure for circulating free DNA from liquid biopsy.

Authors:  Akemi Sato; Chiho Nakashima; Tomonori Abe; Junichi Kato; Mitsuharu Hirai; Tomomi Nakamura; Kazutoshi Komiya; Shinya Kimura; Eisaburo Sueoka; Naoko Sueoka-Aragane
Journal:  Oncotarget       Date:  2018-08-07
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