Literature DB >> 31942443

Genetic Hallmarks and Heterogeneity of Glioblastoma in the Single-Cell Omics Era.

Andrea Degl'Innocenti1, Nicoletta di Leo2, Gianni Ciofani3.   

Abstract

Glioblastoma multiforme is the most common and aggressive malignant primary brain tumor. As implied by its name, the disease displays impressive intrinsic heterogeneity. Among other complications, inter- and intratumoral diversity hamper glioblastoma research and therapy, typically leaving patients with little hope for long-term survival. Extensive genetic analyses, including omics, characterize several recurrent mutations. However, confounding factors mask crucial aspects of the pathology to conventional bulk approaches. In recent years, single-cell omics have made their first appearance in cancer research, and the methodology is about to reach its full potential for glioblastoma too. Here, recent glioblastoma single-cell omics investigations are reviewed, and most promising routes toward less grim prognoses and more efficient therapeutics are discussed.

Entities:  

Keywords:  glioblastoma; glioblastoma multiforme heterogeneity; omics; single cells

Year:  2019        PMID: 31942443      PMCID: PMC6962053          DOI: 10.1002/adtp.201900152

Source DB:  PubMed          Journal:  Adv Ther (Weinh)        ISSN: 2366-3987


  43 in total

1.  New glioblastoma heterogeneity atlas - a shared resource.

Authors:  Wolfgang Wick; Tobias Kessler
Journal:  Nat Rev Neurol       Date:  2018-08       Impact factor: 42.937

2.  Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma.

Authors:  Anoop P Patel; Itay Tirosh; John J Trombetta; Alex K Shalek; Shawn M Gillespie; Hiroaki Wakimoto; Daniel P Cahill; Brian V Nahed; William T Curry; Robert L Martuza; David N Louis; Orit Rozenblatt-Rosen; Mario L Suvà; Aviv Regev; Bradley E Bernstein
Journal:  Science       Date:  2014-06-12       Impact factor: 47.728

3.  Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq.

Authors:  Mariella G Filbin; Itay Tirosh; Volker Hovestadt; McKenzie L Shaw; Leah E Escalante; Nathan D Mathewson; Cyril Neftel; Nelli Frank; Kristine Pelton; Christine M Hebert; Christine Haberler; Keren Yizhak; Johannes Gojo; Kristof Egervari; Christopher Mount; Peter van Galen; Dennis M Bonal; Quang-De Nguyen; Alexander Beck; Claire Sinai; Thomas Czech; Christian Dorfer; Liliana Goumnerova; Cinzia Lavarino; Angel M Carcaboso; Jaume Mora; Ravindra Mylvaganam; Christina C Luo; Andreas Peyrl; Mara Popović; Amedeo Azizi; Tracy T Batchelor; Matthew P Frosch; Maria Martinez-Lage; Mark W Kieran; Pratiti Bandopadhayay; Rameen Beroukhim; Gerhard Fritsch; Gad Getz; Orit Rozenblatt-Rosen; Kai W Wucherpfennig; David N Louis; Michelle Monje; Irene Slavc; Keith L Ligon; Todd R Golub; Aviv Regev; Bradley E Bernstein; Mario L Suvà
Journal:  Science       Date:  2018-04-20       Impact factor: 47.728

Review 4.  The pro-tumorigenic effects of metabolic alterations in glioblastoma including brain tumor initiating cells.

Authors:  Catherine J Libby; Anh Nhat Tran; Sarah E Scott; Corinne Griguer; Anita B Hjelmeland
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2018-01-31       Impact factor: 10.680

Review 5.  Glioblastoma.

Authors:  Hans-Georg Wirsching; Evanthia Galanis; Michael Weller
Journal:  Handb Clin Neurol       Date:  2016

6.  EGFR variant heterogeneity in glioblastoma resolved through single-nucleus sequencing.

Authors:  Joshua M Francis; Cheng-Zhong Zhang; Cecile L Maire; Joonil Jung; Veronica E Manzo; Viktor A Adalsteinsson; Heather Homer; Sam Haidar; Brendan Blumenstiel; Chandra Sekhar Pedamallu; Azra H Ligon; J Christopher Love; Matthew Meyerson; Keith L Ligon
Journal:  Cancer Discov       Date:  2014-06-03       Impact factor: 39.397

7.  Evo-Devo and the evolution of cancer: a hypothesis for metamorphic therapies for the cancers of prolactin-influenced tumourigenesis: with special reference to glioblastoma multiforme (GBM).

Authors:  Roy Douglas Pearson
Journal:  Med Hypotheses       Date:  2009-02-27       Impact factor: 1.538

8.  Relapse pathway of glioblastoma revealed by single-cell molecular analysis.

Authors:  Xuelian Chen; Qin Wen; Andres Stucky; Yunjing Zeng; Shengjia Gao; William G Loudon; Hector W Ho; Mustafa H Kabeer; Shengwen Calvin Li; Xi Zhang; Jiang F Zhong
Journal:  Carcinogenesis       Date:  2018-07-03       Impact factor: 4.944

9.  Single-cell sequencing maps gene expression to mutational phylogenies in PDGF- and EGF-driven gliomas.

Authors:  Sören Müller; Siyuan John Liu; Elizabeth Di Lullo; Martina Malatesta; Alex A Pollen; Tomasz J Nowakowski; Gary Kohanbash; Manish Aghi; Arnold R Kriegstein; Daniel A Lim; Aaron Diaz
Journal:  Mol Syst Biol       Date:  2016-11-25       Impact factor: 11.429

10.  Genetic and functional diversity of propagating cells in glioblastoma.

Authors:  Sara G M Piccirillo; Sue Colman; Nicola E Potter; Frederik W van Delft; Suzanne Lillis; Maria-Jose Carnicer; Lyndal Kearney; Colin Watts; Mel Greaves
Journal:  Stem Cell Reports       Date:  2014-12-18       Impact factor: 7.765

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  4 in total

Review 1.  Myeloid Cell Classification and Therapeutic Opportunities Within the Glioblastoma Tumor Microenvironment in the Single Cell-Omics Era.

Authors:  Collin J Larkin; Víctor A Arrieta; Hinda Najem; Gongbo Li; Peng Zhang; Jason Miska; Peiwen Chen; Charles David James; Adam M Sonabend; Amy B Heimberger
Journal:  Front Immunol       Date:  2022-06-16       Impact factor: 8.786

2.  Ultrasound-responsive nutlin-loaded nanoparticles for combined chemotherapy and piezoelectric treatment of glioblastoma cells.

Authors:  Carlotta Pucci; Attilio Marino; Özlem Şen; Daniele De Pasquale; Martina Bartolucci; Nerea Iturrioz-Rodríguez; Nicoletta di Leo; Giuseppe de Vito; Doriana Debellis; Andrea Petretto; Gianni Ciofani
Journal:  Acta Biomater       Date:  2021-04-21       Impact factor: 8.947

Review 3.  The Hallmarks of Glioblastoma: Heterogeneity, Intercellular Crosstalk and Molecular Signature of Invasiveness and Progression.

Authors:  Filippo Torrisi; Cristiana Alberghina; Simona D'Aprile; Anna M Pavone; Lucia Longhitano; Sebastiano Giallongo; Daniele Tibullo; Michelino Di Rosa; Agata Zappalà; Francesco P Cammarata; Giorgio Russo; Massimo Ippolito; Giacomo Cuttone; Giovanni Li Volti; Nunzio Vicario; Rosalba Parenti
Journal:  Biomedicines       Date:  2022-03-30

Review 4.  Patient-Derived Cancer Organoids for Precision Oncology Treatment.

Authors:  Mark N Pernik; Cylaina E Bird; Jeffrey I Traylor; Diana D Shi; Timothy E Richardson; Samuel K McBrayer; Kalil G Abdullah
Journal:  J Pers Med       Date:  2021-05-17
  4 in total

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