| Literature DB >> 27617220 |
Touraj Mahmoudi1, Khatoon Karimi2, Negar Karimi1, Hamid Farahani3, Hossein Nobakht4, Reza Dabiri4, Mohsen Vahedi5, Mohammad Reza Zali1.
Abstract
BACKGROUND: Colorectal cancer (CRC) is the fourth leading cause of cancer-related death around the world and accumulated evidence indicates the association between CRC and obesity and insulin resistance.Entities:
Keywords: ADIPOQ; ADIPOR1; Colorectal cancer; Gene polymorphism
Year: 2016 PMID: 27617220 PMCID: PMC5006128 DOI: 10.1016/j.mgene.2016.07.008
Source DB: PubMed Journal: Meta Gene ISSN: 2214-5400
Information for the studied markers in adiponectin (ADIPOQ) and adiponectin receptor 1 (ADIPOR1) genes.
| Gene name (SNP ID) | Chromosome location (base change) | Forward primer | PCR program (35 cycles) | PCR size (bp) | Restriction enzyme, incubation temperature | Alleles: RFLP size (bp) |
|---|---|---|---|---|---|---|
| 3q27.3; Exon 2; | 5′-GAAGTAGACTCTGCTGAGATGG-3′ | 93 °C 45 s,64 °C | 372 | Allele T: 372 | ||
| 1q32.1; Intron 1; | 5′-TTTGTGGGAAGACTCTGGCTGGT-3′ | 93 °C 45 s,64 °C | 300 | Allele T: 300 |
Fig. 1Representative results of the PCR-RFLP analysis for ADIPOQ (A) and ADIPOR1 (B) gene variants detected by agarose gel electrophoresis. Lane ‘L’ illustrates the 50 bp DNA ladder.
Selected characteristics of colorectal cancer patients and control subjectsa.
| Variables | Controls | Cases | |
|---|---|---|---|
| Age (years) | 44.3(16.3) | 56.1(12.6) | < 0.001 |
| BMI(kg/m2) | 25.2(4.2) | 25.6(4.9) | 0.261 |
| Gender | |||
| Men | 164(48.4) | 146(55.9) | |
| Women | 175(51.6) | 115(44.1) | 0.066 |
| Smoking history | |||
| No | 290(85.5) | 214(82.0) | |
| Former | 39(11.5) | 32(12.3) | |
| Current | 10(3.0) | 15(5.7) | 0.261 |
| Regular NSAID use | |||
| No | 270(79.6) | 248(95.0) | |
| Yes | 69(20.4) | 13(5.0) | < 0.001 |
| Family history of colorectal cancer | |||
| No | 303(89.4) | 229(87.7) | |
| Yes | 36(10.6) | 32(12.3) | 0.530 |
| Tumor site | |||
| Colon | – | 167(63.9) | |
| Rectal | – | 94(36.1) | – |
| Metastasis | |||
| No | – | 176(89.3) | |
| Yes | – | 21(10.7) | – |
Variables presented as mean (SD) or number (%).
Association between genotypes and alleles of adiponectin (ADIPOQ) and adiponectin receptor 1 (ADIPOR1) gene variants and risk of colorectal cancera.
| Gene (variant) | Controls (n = 339) | Cases (n = 261) | OR (95%CI) |
|---|---|---|---|
| Genotype-wise comparison | |||
| TT | 240(70.8) | 199(76.2) | 1.0(reference) |
| TG | 82(24.2) | 55(21.1) | 0.87(0.57–1.33)0.520 |
| GG | 17(5.0) | 7(2.7) | 0.44(0.17–1.14)0.092 |
| TG and GG | 99(29.2) | 62(23.8) | 0.79(0.53–1.17)0.241 |
| GG versus others | 17(5.0) | 7(2.7) | 0.45(0.18–1.17)0.103 |
| Allele-wise comparison | |||
| T | 562(82.9) | 453(86.8) | 1.0(reference) |
| G | 116(17.1) | 69(13.2) | 1.36(0.98–1.87)0.064 |
| Genotype-wise comparison | |||
| TT | 109(32.2) | 63(24.1) | 1.0(reference) |
| TC | 154(45.4) | 134(51.4) | 1.50(0.99–2.29)0.056 |
| CC | 76(22.4) | 64(24.5) | 1.45(0.89–2.37)0.139 |
| TC and CC | 230(67.8) | 198(75.9) | |
| CC versus others | 76(22.4) | 64(24.5) | 1.12(0.74–1.70)0.579 |
| Allele-wise comparison | |||
| T | 372(54.9) | 260(49.8) | 1.0(reference) |
| C | 306(45.1) | 262(50.2) | 0.82(0.65–1.03)0.082 |
Boldface data indicates significance at P-value < 0.05.
Variables presented as number (%).
Adjusted for age, BMI, sex, smoking status, NSAID use, and family history in genotype-wise comparisons.