| Literature DB >> 27617011 |
Jinyong Kim1, Euna Oh1, Graham S Banting2, Shannon Braithwaite2, Linda Chui3, Nicholas J Ashbolt2, Norman F Neumann2, Byeonghwa Jeon1.
Abstract
Campylobacter jejuni is one of the leading foodborne pathogens worldwide. C. jejuni is isolated from a wide range of foods, domestic animals, wildlife, and environmental sources. The currently available culture-based isolation methods are not highly effective for wastewater samples due to the low number of C. jejuni in the midst of competing bacteria. To detect and isolate C. jejuni from wastewater samples, in this study, we evaluated a few different enrichment conditions using five different antibiotics (i.e., cefoperazone, vancomycin, trimethoprim, polymyxin B, and rifampicin), to which C. jejuni is intrinsically resistant. The selectivity of each enrichment condition was measured with C t value using quantitative real-time PCR, and multiplex PCR to determine Campylobacter species. In addition, the efficacy of Campylobacter isolation on different culture media after selective enrichment was examined by growing on Bolton and Preston agar plates. The addition of polymyxin B, rifampicin, or both to the Bolton selective supplements enhanced the selective isolation of C. jejuni. The results of 16S rDNA sequencing also revealed that Enterococcus spp. and Pseudomonas aeruginosa are major competing bacteria in the enrichment conditions. Although it is known to be difficult to isolate Campylobacter from samples with heavy contamination, this study well exhibited that the manipulation of antibiotic selective pressure improves the isolation efficiency of fastidious Campylobacter from wastewater.Entities:
Keywords: Campylobacter jejuni; antibiotics; isolation; qRT-PCR; wastewater
Year: 2016 PMID: 27617011 PMCID: PMC4999441 DOI: 10.3389/fmicb.2016.01345
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Primers used in this study.
| Primer | Sequence (5′→ 3′) | Reference |
|---|---|---|
| *CampyLvl-16S-F | CCT GAM GCA GCA ACG CC | |
| *CampyLvl-16S-R | CGG AGT TAG CCG GTG CTT ATT | |
| *CampyLvl-16S-P | CTC CGA AAA GTG TCA TCC T | |
| **CampyYM-16S-F | GGA TGA CAC TTT TCG GAG C | |
| **CampyYM-16S-R | CAT TGT AGC ACG TGT GTC | |
| ** | ATA ATC TAG GTG AGA ATC CTA G | |
| ** | GCT TCG CAT AGC TAA CAT | |
| ** | GGT ATG ATT TCT ACA AAG CGA G | |
| ** | ATA AAA GAC TAT CGT CGC GTG | |
| ** | GGT AGC CGC AGC TGC TAA GAT | |
| ** | AGC CAG TAA CGC ATA TTA TAG TAG | |
| ** | TAG AGA GAT AGC AAA AGA GA | |
| ** | TAC ACA TAA TAA TCC CAC CC | |
| ** | CAA ATA AAG TTA GAG GTA GAA TGT | |
| ** | CCA TAA GCA CTA GCT AGC TGA T | |
| ** | CGA TGA TGT GCA AAT TGA AGC | |
| ** | TTC TAG CCC CTT GCT TGA TG | |
| ***IAC-F | CTA ACC TTC GTG ATG AGC AAT CG | |
| ***IAC- R | GAT CAG CTA CGT GAG GTC CTA C | |
| ***IAC-P | AGC TAG TCG ATG CAC TCC AGT CCT CCT | |
| 27F | AGA GTT TGA TCM TGG CTC AG | |
| 1492R | TAC GGY TAC CTT GTT ACG ACT T |
The number of positive detection of Campylobacter 16S rDNA, C. jejuni, C. coli, and C. lari with multiplex PCR in four different enrichment conditions at 42°C.
| Detection with multiplex PCR | BN | BNR | BNP | BNRP |
|---|---|---|---|---|
| 16S rDNA only* | 10 (40%) | 3 (12%) | 9 (33%) | 2 (9%) |
| 16S rDNA + | 7 (28%) | 9 (36%) | 11 (41%) | 9 (39%) |
| 16S rDNA + | 4 (16%) | 6 (24%) | 4 (15%) | 7 (30%) |
| 16S rDNA + | 3 (12%) | 7 (28%) | 2 (7%) | 5 (22%) |
| 16S rDNA + | 1 (4%) | 0 | 1 (4%) | 0 |
| Total 16s rDNA* positive | 25 (100%) | 25 (100%) | 27 (100%) | 23 (100%) |
Distribution of Campylobacter and non-Campylobacter strains in four different enrichment conditions at 42°C.
| Species | BN | BNR | BNP | BNRP |
|---|---|---|---|---|
| 9 (25%) | 10 (28.6%) | 1 (2.2%) | 0 | |
| 3 (8.3%) | 4 (11.4%) | 0 | 0 | |
| 0 | 5 (14.3%) | 7 (15.2%) | 8 (16%) | |
| 4 (11.1%) | 6 (17.1%) | 6 (13%) | 4 (8%) | |
| 5 (13.9%) | 3 (8.6%) | 5 (10.9%) | 0 | |
| 0 | 0 | 1 (2.2%) | 0 | |
| 0 | 0 | 4 (8.7%) | 0 | |
| 15 (41.7%) | 0 | 0 | 0 | |
| 0 | 7 (20%) | 22 (47.8%) | 38 (76%) | |
| Total number of isolates | 36 (100%) | 35 (100%) | 46 (100%) | 50 (100%) |