Literature DB >> 27613854

Morphometricity as a measure of the neuroanatomical signature of a trait.

Mert R Sabuncu1, Tian Ge2, Avram J Holmes3, Jordan W Smoller4, Randy L Buckner5, Bruce Fischl6.   

Abstract

Complex physiological and behavioral traits, including neurological and psychiatric disorders, often associate with distributed anatomical variation. This paper introduces a global metric, called morphometricity, as a measure of the anatomical signature of different traits. Morphometricity is defined as the proportion of phenotypic variation that can be explained by macroscopic brain morphology. We estimate morphometricity via a linear mixed-effects model that uses an anatomical similarity matrix computed based on measurements derived from structural brain MRI scans. We examined over 3,800 unique MRI scans from nine large-scale studies to estimate the morphometricity of a range of phenotypes, including clinical diagnoses such as Alzheimer's disease, and nonclinical traits such as measures of cognition. Our results demonstrate that morphometricity can provide novel insights about the neuroanatomical correlates of a diverse set of traits, revealing associations that might not be detectable through traditional statistical techniques.

Entities:  

Keywords:  brain morphology; neuroimaging; statistical association

Mesh:

Year:  2016        PMID: 27613854      PMCID: PMC5047166          DOI: 10.1073/pnas.1604378113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

1.  Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models.

Authors:  Dawei Liu; Xihong Lin; Debashis Ghosh
Journal:  Biometrics       Date:  2007-12       Impact factor: 2.571

2.  Massively expedited genome-wide heritability analysis (MEGHA).

Authors:  Tian Ge; Thomas E Nichols; Phil H Lee; Avram J Holmes; Joshua L Roffman; Randy L Buckner; Mert R Sabuncu; Jordan W Smoller
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-09       Impact factor: 11.205

3.  Common SNPs explain a large proportion of the heritability for human height.

Authors:  Jian Yang; Beben Benyamin; Brian P McEvoy; Scott Gordon; Anjali K Henders; Dale R Nyholt; Pamela A Madden; Andrew C Heath; Nicholas G Martin; Grant W Montgomery; Michael E Goddard; Peter M Visscher
Journal:  Nat Genet       Date:  2010-06-20       Impact factor: 38.330

Review 4.  The Parkinson Progression Marker Initiative (PPMI).

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Journal:  Prog Neurobiol       Date:  2011-09-14       Impact factor: 10.885

5.  2014 Alzheimer's disease facts and figures.

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Journal:  Alzheimers Dement       Date:  2014-03       Impact factor: 21.566

6.  Function in the human connectome: task-fMRI and individual differences in behavior.

Authors:  Deanna M Barch; Gregory C Burgess; Michael P Harms; Steven E Petersen; Bradley L Schlaggar; Maurizio Corbetta; Matthew F Glasser; Sandra Curtiss; Sachin Dixit; Cindy Feldt; Dan Nolan; Edward Bryant; Tucker Hartley; Owen Footer; James M Bjork; Russ Poldrack; Steve Smith; Heidi Johansen-Berg; Abraham Z Snyder; David C Van Essen
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

Review 7.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

8.  Alzheimer disease in the US population: prevalence estimates using the 2000 census.

Authors:  Liesi E Hebert; Paul A Scherr; Julia L Bienias; David A Bennett; Denis A Evans
Journal:  Arch Neurol       Date:  2003-08

9.  Brain Genomics Superstruct Project initial data release with structural, functional, and behavioral measures.

Authors:  Avram J Holmes; Marisa O Hollinshead; Timothy M O'Keefe; Victor I Petrov; Gabriele R Fariello; Lawrence L Wald; Bruce Fischl; Bruce R Rosen; Ross W Mair; Joshua L Roffman; Jordan W Smoller; Randy L Buckner
Journal:  Sci Data       Date:  2015-07-07       Impact factor: 6.444

10.  Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs.

Authors:  S Hong Lee; Stephan Ripke; Benjamin M Neale; Stephen V Faraone; Shaun M Purcell; Roy H Perlis; Bryan J Mowry; Anita Thapar; Michael E Goddard; John S Witte; Devin Absher; Ingrid Agartz; Huda Akil; Farooq Amin; Ole A Andreassen; Adebayo Anjorin; Richard Anney; Verneri Anttila; Dan E Arking; Philip Asherson; Maria H Azevedo; Lena Backlund; Judith A Badner; Anthony J Bailey; Tobias Banaschewski; Jack D Barchas; Michael R Barnes; Thomas B Barrett; Nicholas Bass; Agatino Battaglia; Michael Bauer; Mònica Bayés; Frank Bellivier; Sarah E Bergen; Wade Berrettini; Catalina Betancur; Thomas Bettecken; Joseph Biederman; Elisabeth B Binder; Donald W Black; Douglas H R Blackwood; Cinnamon S Bloss; Michael Boehnke; Dorret I Boomsma; Gerome Breen; René Breuer; Richard Bruggeman; Paul Cormican; Nancy G Buccola; Jan K Buitelaar; William E Bunney; Joseph D Buxbaum; William F Byerley; Enda M Byrne; Sian Caesar; Wiepke Cahn; Rita M Cantor; Miguel Casas; Aravinda Chakravarti; Kimberly Chambert; Khalid Choudhury; Sven Cichon; C Robert Cloninger; David A Collier; Edwin H Cook; Hilary Coon; Bru Cormand; Aiden Corvin; William H Coryell; David W Craig; Ian W Craig; Jennifer Crosbie; Michael L Cuccaro; David Curtis; Darina Czamara; Susmita Datta; Geraldine Dawson; Richard Day; Eco J De Geus; Franziska Degenhardt; Srdjan Djurovic; Gary J Donohoe; Alysa E Doyle; Jubao Duan; Frank Dudbridge; Eftichia Duketis; Richard P Ebstein; Howard J Edenberg; Josephine Elia; Sean Ennis; Bruno Etain; Ayman Fanous; Anne E Farmer; I Nicol Ferrier; Matthew Flickinger; Eric Fombonne; Tatiana Foroud; Josef Frank; Barbara Franke; Christine Fraser; Robert Freedman; Nelson B Freimer; Christine M Freitag; Marion Friedl; Louise Frisén; Louise Gallagher; Pablo V Gejman; Lyudmila Georgieva; Elliot S Gershon; Daniel H Geschwind; Ina Giegling; Michael Gill; Scott D Gordon; Katherine Gordon-Smith; Elaine K Green; Tiffany A Greenwood; Dorothy E Grice; Magdalena Gross; Detelina Grozeva; Weihua Guan; Hugh Gurling; Lieuwe De Haan; Jonathan L Haines; Hakon Hakonarson; Joachim Hallmayer; Steven P Hamilton; Marian L Hamshere; Thomas F Hansen; Annette M Hartmann; Martin Hautzinger; Andrew C Heath; Anjali K Henders; Stefan Herms; Ian B Hickie; Maria Hipolito; Susanne Hoefels; Peter A Holmans; Florian Holsboer; Witte J Hoogendijk; Jouke-Jan Hottenga; Christina M Hultman; Vanessa Hus; Andrés Ingason; Marcus Ising; Stéphane Jamain; Edward G Jones; Ian Jones; Lisa Jones; Jung-Ying Tzeng; Anna K Kähler; René S Kahn; Radhika Kandaswamy; Matthew C Keller; James L Kennedy; Elaine Kenny; Lindsey Kent; Yunjung Kim; George K Kirov; Sabine M Klauck; Lambertus Klei; James A Knowles; Martin A Kohli; Daniel L Koller; Bettina Konte; Ania Korszun; Lydia Krabbendam; Robert Krasucki; Jonna Kuntsi; Phoenix Kwan; Mikael Landén; Niklas Långström; Mark Lathrop; Jacob Lawrence; William B Lawson; Marion Leboyer; David H Ledbetter; Phil H Lee; Todd Lencz; Klaus-Peter Lesch; Douglas F Levinson; Cathryn M Lewis; Jun Li; Paul Lichtenstein; Jeffrey A Lieberman; Dan-Yu Lin; Don H Linszen; Chunyu Liu; Falk W Lohoff; Sandra K Loo; Catherine Lord; Jennifer K Lowe; Susanne Lucae; Donald J MacIntyre; Pamela A F Madden; Elena Maestrini; Patrik K E Magnusson; Pamela B Mahon; Wolfgang Maier; Anil K Malhotra; Shrikant M Mane; Christa L Martin; Nicholas G Martin; Manuel Mattheisen; Keith Matthews; Morten Mattingsdal; Steven A McCarroll; Kevin A McGhee; James J McGough; Patrick J McGrath; Peter McGuffin; Melvin G McInnis; Andrew McIntosh; Rebecca McKinney; Alan W McLean; Francis J McMahon; William M McMahon; Andrew McQuillin; Helena Medeiros; Sarah E Medland; Sandra Meier; Ingrid Melle; Fan Meng; Jobst Meyer; Christel M Middeldorp; Lefkos Middleton; Vihra Milanova; Ana Miranda; Anthony P Monaco; Grant W Montgomery; Jennifer L Moran; Daniel Moreno-De-Luca; Gunnar Morken; Derek W Morris; Eric M Morrow; Valentina Moskvina; Pierandrea Muglia; Thomas W Mühleisen; Walter J Muir; Bertram Müller-Myhsok; Michael Murtha; Richard M Myers; Inez Myin-Germeys; Michael C Neale; Stan F Nelson; Caroline M Nievergelt; Ivan Nikolov; Vishwajit Nimgaonkar; Willem A Nolen; Markus M Nöthen; John I Nurnberger; Evaristus A Nwulia; Dale R Nyholt; Colm O'Dushlaine; Robert D Oades; Ann Olincy; Guiomar Oliveira; Line Olsen; Roel A Ophoff; Urban Osby; Michael J Owen; Aarno Palotie; Jeremy R Parr; Andrew D Paterson; Carlos N Pato; Michele T Pato; Brenda W Penninx; Michele L Pergadia; Margaret A Pericak-Vance; Benjamin S Pickard; Jonathan Pimm; Joseph Piven; Danielle Posthuma; James B Potash; Fritz Poustka; Peter Propping; Vinay Puri; Digby J Quested; Emma M Quinn; Josep Antoni Ramos-Quiroga; Henrik B Rasmussen; Soumya Raychaudhuri; Karola Rehnström; Andreas Reif; Marta Ribasés; John P Rice; Marcella Rietschel; Kathryn Roeder; Herbert Roeyers; Lizzy Rossin; Aribert Rothenberger; Guy Rouleau; Douglas Ruderfer; Dan Rujescu; Alan R Sanders; Stephan J Sanders; Susan L Santangelo; Joseph A Sergeant; Russell Schachar; Martin Schalling; Alan F Schatzberg; William A Scheftner; Gerard D Schellenberg; Stephen W Scherer; Nicholas J Schork; Thomas G Schulze; Johannes Schumacher; Markus Schwarz; Edward Scolnick; Laura J Scott; Jianxin Shi; Paul D Shilling; Stanley I Shyn; Jeremy M Silverman; Susan L Slager; Susan L Smalley; Johannes H Smit; Erin N Smith; Edmund J S Sonuga-Barke; David St Clair; Matthew State; Michael Steffens; Hans-Christoph Steinhausen; John S Strauss; Jana Strohmaier; T Scott Stroup; James S Sutcliffe; Peter Szatmari; Szabocls Szelinger; Srinivasa Thirumalai; Robert C Thompson; Alexandre A Todorov; Federica Tozzi; Jens Treutlein; Manfred Uhr; Edwin J C G van den Oord; Gerard Van Grootheest; Jim Van Os; Astrid M Vicente; Veronica J Vieland; John B Vincent; Peter M Visscher; Christopher A Walsh; Thomas H Wassink; Stanley J Watson; Myrna M Weissman; Thomas Werge; Thomas F Wienker; Ellen M Wijsman; Gonneke Willemsen; Nigel Williams; A Jeremy Willsey; Stephanie H Witt; Wei Xu; Allan H Young; Timothy W Yu; Stanley Zammit; Peter P Zandi; Peng Zhang; Frans G Zitman; Sebastian Zöllner; Bernie Devlin; John R Kelsoe; Pamela Sklar; Mark J Daly; Michael C O'Donovan; Nicholas Craddock; Patrick F Sullivan; Jordan W Smoller; Kenneth S Kendler; Naomi R Wray
Journal:  Nat Genet       Date:  2013-08-11       Impact factor: 38.330

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  17 in total

1.  The Shared Genetic Basis of Educational Attainment and Cerebral Cortical Morphology.

Authors:  Tian Ge; Chia-Yen Chen; Alysa E Doyle; Richard Vettermann; Lauri J Tuominen; Daphne J Holt; Mert R Sabuncu; Jordan W Smoller
Journal:  Cereb Cortex       Date:  2019-07-22       Impact factor: 5.357

2.  Hippocampal Shape Maturation in Childhood and Adolescence.

Authors:  Kirsten M Lynch; Yonggang Shi; Arthur W Toga; Kristi A Clark
Journal:  Cereb Cortex       Date:  2019-08-14       Impact factor: 5.357

3.  Computing Univariate Neurodegenerative Biomarkers with Volumetric Optimal Transportation: A Pilot Study.

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Journal:  Neuroinformatics       Date:  2020-10

4.  Spatial Topography of Individual-Specific Cortical Networks Predicts Human Cognition, Personality, and Emotion.

Authors:  Ru Kong; Jingwei Li; Csaba Orban; Mert R Sabuncu; Hesheng Liu; Alexander Schaefer; Nanbo Sun; Xi-Nian Zuo; Avram J Holmes; Simon B Eickhoff; B T Thomas Yeo
Journal:  Cereb Cortex       Date:  2019-06-01       Impact factor: 5.357

5.  Parsimonious model for mass-univariate vertexwise analysis.

Authors:  Baptiste Couvy-Duchesne; Futao Zhang; Kathryn E Kemper; Julia Sidorenko; Naomi R Wray; Peter M Visscher; Olivier Colliot; Jian Yang
Journal:  J Med Imaging (Bellingham)       Date:  2022-05-20

6.  The relationship between spatial configuration and functional connectivity of brain regions.

Authors:  Samuel J Harrison; Stephen M Smith; Janine Diane Bijsterbosch; Mark W Woolrich; Matthew F Glasser; Emma C Robinson; Christian F Beckmann; David C Van Essen
Journal:  Elife       Date:  2018-02-16       Impact factor: 8.140

7.  Efficient Pairwise Neuroimage Analysis Using the Soft Jaccard Index and 3D Keypoint Sets.

Authors:  Laurent Chauvin; Kuldeep Kumar; Christian Desrosiers; William Wells; Matthew Toews
Journal:  IEEE Trans Med Imaging       Date:  2022-04-01       Impact factor: 11.037

8.  Social brain volume is associated with in-degree social network size among older adults.

Authors:  Seyul Kwak; Won-Tak Joo; Yoosik Youm; Jeanyung Chey
Journal:  Proc Biol Sci       Date:  2018-01-31       Impact factor: 5.349

9.  A unified framework for association and prediction from vertex-wise grey-matter structure.

Authors:  Baptiste Couvy-Duchesne; Lachlan T Strike; Futao Zhang; Yan Holtz; Zhili Zheng; Kathryn E Kemper; Loic Yengo; Olivier Colliot; Margaret J Wright; Naomi R Wray; Jian Yang; Peter M Visscher
Journal:  Hum Brain Mapp       Date:  2020-07-20       Impact factor: 5.038

10.  Morphometric Similarity Networks Detect Microscale Cortical Organization and Predict Inter-Individual Cognitive Variation.

Authors:  Jakob Seidlitz; František Váša; Maxwell Shinn; Rafael Romero-Garcia; Kirstie J Whitaker; Petra E Vértes; Konrad Wagstyl; Paul Kirkpatrick Reardon; Liv Clasen; Siyuan Liu; Adam Messinger; David A Leopold; Peter Fonagy; Raymond J Dolan; Peter B Jones; Ian M Goodyer; Armin Raznahan; Edward T Bullmore
Journal:  Neuron       Date:  2017-12-21       Impact factor: 17.173

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